RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 AXIN2Q9Y2T1 843 aa38.87■■■■□ 3.81
SOD1-203ENST00000470944 IP6K1Q92551 441 aa38.86■■■■□ 3.81
SOD1-203ENST00000470944 RTL1A6NKG5 1358 aa38.85■■■■□ 3.81
SOD1-203ENST00000470944 KIF24Q5T7B8 1368 aa38.85■■■■□ 3.81
SOD1-203ENST00000470944 MRS2Q9HD23 443 aa38.84■■■■□ 3.81
SOD1-203ENST00000470944 CCER2I3L3R5 266 aa38.83■■■■□ 3.81
SOD1-203ENST00000470944 COL3A1P02461 1466 aaPredicted RBP38.83■■■■□ 3.81
SOD1-203ENST00000470944 COL18A1P39060 1754 aa38.83■■■■□ 3.81
SOD1-203ENST00000470944 INSRP06213 1382 aa38.82■■■■□ 3.8
SOD1-203ENST00000470944 CFAP53Q96M91 514 aa38.8■■■■□ 3.8
SOD1-203ENST00000470944 LMO7Q8WWI1 1683 aa38.78■■■■□ 3.8
SOD1-203ENST00000470944 CAMTA1Q9Y6Y1 1673 aa38.76■■■■□ 3.8
SOD1-203ENST00000470944 BLMP54132 1417 aaPredicted RBP38.75■■■■□ 3.79
SOD1-203ENST00000470944 EIF4A2Q14240 407 aaKnown RBP38.75■■■■□ 3.79
SOD1-203ENST00000470944 LTV1Q96GA3 475 aaPredicted RBP38.75■■■■□ 3.79
SOD1-203ENST00000470944 ABCC6O95255 1503 aa38.75■■■■□ 3.79
SOD1-203ENST00000470944 RGPD5Q99666 1765 aa38.74■■■■□ 3.79
SOD1-203ENST00000470944 COL14A1Q05707 1796 aaKnown RBP38.73■■■■□ 3.79
SOD1-203ENST00000470944 DIAPH1O60610 1272 aaKnown RBP38.73■■■■□ 3.79
SOD1-203ENST00000470944 IL13P35225 146 aa38.72■■■■□ 3.79
SOD1-203ENST00000470944 C8orf37Q96NL8 207 aa38.72■■■■□ 3.79
SOD1-203ENST00000470944 BTG4Q9NY30 223 aa38.72■■■■□ 3.79
SOD1-203ENST00000470944 ANKRD24Q8TF21 1146 aa38.7■■■■□ 3.79
SOD1-203ENST00000470944 ERBB3P21860 1342 aa38.69■■■■□ 3.78
SOD1-203ENST00000470944 MEX3CQ5U5Q3 659 aaKnown RBP38.67■■■■□ 3.78
SOD1-203ENST00000470944 ILDR1Q86SU0 546 aaPredicted RBP38.67■■■■□ 3.78
SOD1-203ENST00000470944 PNISRQ8TF01 805 aaKnown RBP38.67■■■■□ 3.78
SOD1-203ENST00000470944 COL5A2P05997 1499 aaPredicted RBP38.67■■■■□ 3.78
SOD1-203ENST00000470944 PLCH1Q4KWH8 1693 aa38.66■■■■□ 3.78
SOD1-203ENST00000470944 NGLY1Q96IV0 654 aa38.66■■■■□ 3.78
SOD1-203ENST00000470944 SLIT2O94813 1529 aa38.64■■■■□ 3.78
SOD1-203ENST00000470944 U2SURPO15042 1029 aaKnown RBP38.63■■■■□ 3.78
SOD1-203ENST00000470944 STRN4Q9NRL3 753 aa38.63■■■■□ 3.78
SOD1-203ENST00000470944 EYA1Q99502 592 aa38.61■■■■□ 3.77
SOD1-203ENST00000470944 NUDCQ9Y266 331 aa38.6■■■■□ 3.77
SOD1-203ENST00000470944 CSB-PGBD3P0DP91 1061 aa38.6■■■■□ 3.77
SOD1-203ENST00000470944 EVA1CP58658 441 aa38.59■■■■□ 3.77
SOD1-203ENST00000470944 NBPF6Q5VWK0 638 aa38.59■■■■□ 3.77
SOD1-203ENST00000470944 FNBP4Q8N3X1 1017 aaPredicted RBP38.59■■■■□ 3.77
SOD1-203ENST00000470944 NBPF4Q96M43 638 aa38.59■■■■□ 3.77
SOD1-203ENST00000470944 WDR17Q8IZU2 1322 aa38.58■■■■□ 3.77
SOD1-203ENST00000470944 WDR43Q15061 677 aaKnown RBP eCLIP38.58■■■■□ 3.77
SOD1-203ENST00000470944 LARP1Q6PKG0 1096 aaKnown RBP38.58■■■■□ 3.77
SOD1-203ENST00000470944 FAM9BQ8IZU0 186 aa38.58■■■■□ 3.77
SOD1-203ENST00000470944 U2AF1L5P0DN76 240 aaPredicted RBP38.57■■■■□ 3.76
SOD1-203ENST00000470944 U2AF1Q01081 240 aaKnown RBP eCLIP38.57■■■■□ 3.76
SOD1-203ENST00000470944 ADAMTS8Q9UP79 889 aa38.57■■■■□ 3.76
SOD1-203ENST00000470944 RGPD1P0DJD0 1748 aa38.56■■■■□ 3.76
SOD1-203ENST00000470944 USHBP1Q8N6Y0 703 aa38.56■■■■□ 3.76
SOD1-203ENST00000470944 BCL9LQ86UU0 1499 aa38.56■■■■□ 3.76
SOD1-203ENST00000470944 NRAPQ86VF7 1730 aa38.55■■■■□ 3.76
SOD1-203ENST00000470944 IGSF1Q8N6C5 1336 aa38.55■■■■□ 3.76
SOD1-203ENST00000470944 NWD2Q9ULI1 1742 aa38.55■■■■□ 3.76
SOD1-203ENST00000470944 NLRP2Q9NX02 1062 aa38.55■■■■□ 3.76
SOD1-203ENST00000470944 RGPD2P0DJD1 1756 aa38.55■■■■□ 3.76
SOD1-203ENST00000470944 AEBP1Q8IUX7 1158 aa38.54■■■■□ 3.76
SOD1-203ENST00000470944 HMOX1P09601 288 aa38.53■■■■□ 3.76
SOD1-203ENST00000470944 AFF2P51816 1311 aa38.52■■■■□ 3.76
SOD1-203ENST00000470944 TOM1L2Q6ZVM7 507 aa38.52■■■■□ 3.76
SOD1-203ENST00000470944 UNC5CLQ8IV45 518 aa38.51■■■■□ 3.76
SOD1-203ENST00000470944 SULT6B1Q6IMI4 303 aa38.5■■■■□ 3.75
SOD1-203ENST00000470944 USP21Q9UK80 565 aa38.5■■■■□ 3.75
SOD1-203ENST00000470944 CRB1P82279 1406 aa38.47■■■■□ 3.75
SOD1-203ENST00000470944 FAM208AQ9UK61 1670 aaKnown RBP38.47■■■■□ 3.75
SOD1-203ENST00000470944 NCAPD2Q15021 1401 aa38.46■■■■□ 3.75
SOD1-203ENST00000470944 KDRP35968 1356 aa38.45■■■■□ 3.75
SOD1-203ENST00000470944 CARD10Q9BWT7 1032 aa38.44■■■■□ 3.74
SOD1-203ENST00000470944 RSPH6AQ9H0K4 717 aa38.44■■■■□ 3.74
SOD1-203ENST00000470944 USP35Q9P2H5 1018 aa38.44■■■■□ 3.74
SOD1-203ENST00000470944 FCHSD2O94868 740 aa38.41■■■■□ 3.74
SOD1-203ENST00000470944 CCDC146Q8IYE0 955 aa38.41■■■■□ 3.74
SOD1-203ENST00000470944 PRKAR2BP31323 418 aa38.39■■■■□ 3.74
SOD1-203ENST00000470944 VPS72Q15906 364 aa38.39■■■■□ 3.74
SOD1-203ENST00000470944 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.39■■■■□ 3.74
SOD1-203ENST00000470944 SPATA31A1Q5TZJ5 1347 aa38.38■■■■□ 3.73
SOD1-203ENST00000470944 SPATA31A5Q5VU36 1347 aa38.38■■■■□ 3.73
SOD1-203ENST00000470944 SPATA31A7Q8IWB4 1347 aa38.38■■■■□ 3.73
SOD1-203ENST00000470944 CCDC9Q9Y3X0 531 aaKnown RBP38.38■■■■□ 3.73
SOD1-203ENST00000470944 PLEKHF1Q96S99 279 aa38.37■■■■□ 3.73
SOD1-203ENST00000470944 PHACTR3Q96KR7 559 aa38.33■■■■□ 3.73
SOD1-203ENST00000470944 MEGF6O75095 1541 aa38.32■■■■□ 3.72
SOD1-203ENST00000470944 ATRNO75882 1429 aa38.32■■■■□ 3.72
SOD1-203ENST00000470944 SENP3-EIF4A1A0A087X0R7 540 aa38.32■■■■□ 3.72
SOD1-203ENST00000470944 TCP11L2Q8N4U5 519 aa38.31■■■■□ 3.72
SOD1-203ENST00000470944 RUNDC1Q96C34 613 aa38.29■■■■□ 3.72
SOD1-203ENST00000470944 TRPC5Q9UL62 973 aaPredicted RBP38.29■■■■□ 3.72
SOD1-203ENST00000470944 RAPGEF4Q8WZA2 1011 aa38.29■■■■□ 3.72
SOD1-203ENST00000470944 QTRT2Q9H974 415 aaKnown RBP38.29■■■■□ 3.72
SOD1-203ENST00000470944 PNNQ9H307 717 aaKnown RBP38.26■■■■□ 3.72
SOD1-203ENST00000470944 RGS17Q9UGC6 210 aaPredicted RBP38.26■■■■□ 3.72
SOD1-203ENST00000470944 GJD4Q96KN9 370 aaPredicted RBP38.26■■■■□ 3.71
SOD1-203ENST00000470944 IL2RBP14784 551 aa38.25■■■■□ 3.71
SOD1-203ENST00000470944 ZNF772Q68DY9 489 aaPredicted RBP38.25■■■■□ 3.71
SOD1-203ENST00000470944 THRAP3Q9Y2W1 955 aaKnown RBP38.25■■■■□ 3.71
SOD1-203ENST00000470944 DISP2A7MBM2 1401 aa38.24■■■■□ 3.71
SOD1-203ENST00000470944 TATP17735 454 aaPredicted RBP38.24■■■■□ 3.71
SOD1-203ENST00000470944 GLI3P10071 1580 aa38.23■■■■□ 3.71
SOD1-203ENST00000470944 MAPK8IP3Q9UPT6 1336 aa38.23■■■■□ 3.71
SOD1-203ENST00000470944 APAF1O14727 1248 aa38.22■■■■□ 3.71
SOD1-203ENST00000470944 FAM98CQ17RN3 349 aaKnown RBP38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms