RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.49
TGFBR3-206ENST00000470600 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-206ENST00000470600 DISP2A7MBM2 1401 aa12.02□□□□□ -0.49
TGFBR3-206ENST00000470600 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
TGFBR3-206ENST00000470600 CHRNA2Q15822 529 aa12.01□□□□□ -0.49
TGFBR3-206ENST00000470600 LMOD2Q6P5Q4 547 aa12.01□□□□□ -0.49
TGFBR3-206ENST00000470600 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
TGFBR3-206ENST00000470600 ZC3H6P61129 1189 aaKnown RBP12□□□□□ -0.49
TGFBR3-206ENST00000470600 RTL1A6NKG5 1358 aa12□□□□□ -0.49
TGFBR3-206ENST00000470600 UNC5CLQ8IV45 518 aa11.99□□□□□ -0.49
TGFBR3-206ENST00000470600 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
TGFBR3-206ENST00000470600 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
TGFBR3-206ENST00000470600 KIF24Q5T7B8 1368 aa11.98□□□□□ -0.49
TGFBR3-206ENST00000470600 PARD3Q8TEW0 1356 aa11.98□□□□□ -0.49
TGFBR3-206ENST00000470600 ERBB3P21860 1342 aa11.98□□□□□ -0.49
TGFBR3-206ENST00000470600 INSRP06213 1382 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 VPS72Q15906 364 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 POLR3GLQ9BT43 218 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 PRDM11Q9NQV5 511 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 EMILIN1Q9Y6C2 1016 aa11.97□□□□□ -0.49
TGFBR3-206ENST00000470600 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 HOXC9P31274 260 aa11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 COG3Q96JB2 828 aa11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 USP21Q9UK80 565 aa11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 PKD1L3Q7Z443 1732 aa11.96□□□□□ -0.49
TGFBR3-206ENST00000470600 CRB1P82279 1406 aa11.95□□□□□ -0.5
TGFBR3-206ENST00000470600 WDR17Q8IZU2 1322 aa11.95□□□□□ -0.5
TGFBR3-206ENST00000470600 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
TGFBR3-206ENST00000470600 IP6K1Q92551 441 aa11.95□□□□□ -0.5
TGFBR3-206ENST00000470600 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
TGFBR3-206ENST00000470600 FLT4P35916 1363 aa11.94□□□□□ -0.5
TGFBR3-206ENST00000470600 MEGF6O75095 1541 aa11.93□□□□□ -0.5
TGFBR3-206ENST00000470600 SOX12O15370 315 aa11.93□□□□□ -0.5
TGFBR3-206ENST00000470600 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
TGFBR3-206ENST00000470600 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
TGFBR3-206ENST00000470600 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
TGFBR3-206ENST00000470600 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
TGFBR3-206ENST00000470600 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
TGFBR3-206ENST00000470600 TRPC5Q9UL62 973 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-206ENST00000470600 SBF2Q86WG5 1849 aa11.92□□□□□ -0.5
TGFBR3-206ENST00000470600 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-206ENST00000470600 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
TGFBR3-206ENST00000470600 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
TGFBR3-206ENST00000470600 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
TGFBR3-206ENST00000470600 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-206ENST00000470600 DDX10Q13206 875 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-206ENST00000470600 CC2D1BQ5T0F9 858 aaKnown RBP11.89□□□□□ -0.51
TGFBR3-206ENST00000470600 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
TGFBR3-206ENST00000470600 ANKRD24Q8TF21 1146 aa11.89□□□□□ -0.51
TGFBR3-206ENST00000470600 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
TGFBR3-206ENST00000470600 KDRP35968 1356 aa11.89□□□□□ -0.51
TGFBR3-206ENST00000470600 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 TNS2Q63HR2 1409 aa11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
TGFBR3-206ENST00000470600 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
TGFBR3-206ENST00000470600 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
TGFBR3-206ENST00000470600 IL13P35225 146 aa11.86□□□□□ -0.51
TGFBR3-206ENST00000470600 MORC1Q86VD1 984 aa11.86□□□□□ -0.51
TGFBR3-206ENST00000470600 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
TGFBR3-206ENST00000470600 BCL9O00512 1426 aa11.86□□□□□ -0.51
TGFBR3-206ENST00000470600 RXRBP28702 533 aa11.85□□□□□ -0.51
TGFBR3-206ENST00000470600 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
TGFBR3-206ENST00000470600 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 MTHFSP49914 203 aa11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 TCP11L2Q8N4U5 519 aa11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 EYA1Q99502 592 aa11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
TGFBR3-206ENST00000470600 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
TGFBR3-206ENST00000470600 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
TGFBR3-206ENST00000470600 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
TGFBR3-206ENST00000470600 AMPHP49418 695 aa11.83□□□□□ -0.52
TGFBR3-206ENST00000470600 PRKRIP1Q9H875 184 aaPredicted RBP11.83□□□□□ -0.52
TGFBR3-206ENST00000470600 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
TGFBR3-206ENST00000470600 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
TGFBR3-206ENST00000470600 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
TGFBR3-206ENST00000470600 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
TGFBR3-206ENST00000470600 RREB1Q92766 1687 aa11.81□□□□□ -0.52
TGFBR3-206ENST00000470600 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-206ENST00000470600 TOM1L2Q6ZVM7 507 aa11.8□□□□□ -0.52
TGFBR3-206ENST00000470600 MARCH10Q8NA82 808 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-206ENST00000470600 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-206ENST00000470600 ITGB4P16144 1822 aa11.8□□□□□ -0.52
TGFBR3-206ENST00000470600 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
TGFBR3-206ENST00000470600 CCDC184Q52MB2 194 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms