RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 C16orf71Q8IYS4 520 aaPredicted RBP8.41□□□□□ -1.06
CD46-212ENST00000469535 AK7Q96M32 723 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 CAGE1Q8TC20 777 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 SLC12A5Q9H2X9 1139 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
CD46-212ENST00000469535 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.062e-9■□□□□ 9.2
CD46-212ENST00000469535 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
CD46-212ENST00000469535 TCP11L2Q8N4U5 519 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 USHBP1Q8N6Y0 703 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 CCDC97Q96F63 343 aaPredicted RBP8.41□□□□□ -1.06
CD46-212ENST00000469535 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
CD46-212ENST00000469535 PDE4AP27815 886 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
CD46-212ENST00000469535 HIP1O00291 1037 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 CDC45O75419 566 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 IDH1O75874 414 aaKnown RBP8.4□□□□□ -1.06
CD46-212ENST00000469535 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
CD46-212ENST00000469535 SKOR2Q2VWA4 1001 aaPredicted RBP8.4□□□□□ -1.06
CD46-212ENST00000469535 TSR2Q969E8 191 aaKnown RBP8.4□□□□□ -1.06
CD46-212ENST00000469535 IGF1RP08069 1367 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 ZSCAN25Q6NSZ9 544 aa8.4□□□□□ -1.06
CD46-212ENST00000469535 STAC3Q96MF2 364 aa8.4□□□□□ -1.07
CD46-212ENST00000469535 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.07
CD46-212ENST00000469535 WDR70Q9NW82 654 aa8.4□□□□□ -1.07
CD46-212ENST00000469535 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.07
CD46-212ENST00000469535 CA8P35219 290 aa8.4□□□□□ -1.07
CD46-212ENST00000469535 METTL24Q5JXM2 366 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 TRIM22Q8IYM9 498 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 AACSQ86V21 672 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 SEPT11Q9NVA2 429 aaKnown RBP8.39□□□□□ -1.07
CD46-212ENST00000469535 NESP48681 1621 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 ERBINQ96RT1 1412 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 FMNL2Q96PY5 1086 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
CD46-212ENST00000469535 SLC52A1Q9NWF4 448 aa8.39□□□□□ -1.07
CD46-212ENST00000469535 NOB1Q9ULX3 412 aaKnown RBP8.39□□□□□ -1.07
CD46-212ENST00000469535 CAVIN4Q5BKX8 364 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 EXOC5O00471 708 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 FOXO3O43524 673 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 DZIP1Q86YF9 867 aaKnown RBP8.38□□□□□ -1.07
CD46-212ENST00000469535 NAT10Q9H0A0 1025 aaKnown RBP8.38□□□□□ -1.07
CD46-212ENST00000469535 SNAPC4Q5SXM2 1469 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 MIS18AQ9NYP9 233 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 STK38Q15208 465 aa8.38□□□□□ -1.07
CD46-212ENST00000469535 WAPLQ7Z5K2 1190 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 NUDT16Q96DE0 195 aaKnown RBP8.37□□□□□ -1.07
CD46-212ENST00000469535 SMC2O95347 1197 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 NBPF1Q3BBV0 1214 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 AIDAQ96BJ3 306 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 KIF7Q2M1P5 1343 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 CDR1P51861 262 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 FILIP1LQ4L180 1135 aa8.37□□□□□ -1.07
CD46-212ENST00000469535 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 NCOA2Q15596 1464 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 CCT4P50991 539 aaKnown RBP8.36□□□□□ -1.07
CD46-212ENST00000469535 CCDC96Q2M329 555 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 RFC4P35249 363 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 TNIP1Q15025 636 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 LRRCC1Q9C099 1032 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 MYD88Q99836 296 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 ZBED9Q6R2W3 1325 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 TRIM21P19474 475 aaKnown RBP8.36□□□□□ -1.07
CD46-212ENST00000469535 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 KINO60870 393 aaKnown RBP8.36□□□□□ -1.07
CD46-212ENST00000469535 NEFHP12036 1026 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 PPP2R1AP30153 589 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 MNS1Q8NEH6 495 aa8.36□□□□□ -1.07
CD46-212ENST00000469535 PPP4R3AQ6IN85 833 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 ZNF396Q96N95 335 aaPredicted RBP8.35□□□□□ -1.07
CD46-212ENST00000469535 TRMT112Q9UI30 125 aaKnown RBP8.35□□□□□ -1.07
CD46-212ENST00000469535 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 ANKRD62A6NC57 917 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 BCAR3O75815 825 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 LIG1P18858 919 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 GPTP24298 496 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 NOL7Q9UMY1 257 aaKnown RBP8.35□□□□□ -1.07
CD46-212ENST00000469535 NEK4P51957 841 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 NUCB2P80303 420 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 CHMP5Q9NZZ3 219 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 C9orf84Q5VXU9 1444 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 TRMT1LQ7Z2T5 733 aaKnown RBP8.35□□□□□ -1.07
CD46-212ENST00000469535 FEZ1Q99689 392 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 SLC4A8Q2Y0W8 1093 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 SEC63Q9UGP8 760 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms