RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
SCFD1-205ENST00000469043 SOS2Q07890 1332 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-205ENST00000469043 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
SCFD1-205ENST00000469043 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
SCFD1-205ENST00000469043 LRRN4Q8WUT4 740 aa9.41□□□□□ -0.9
SCFD1-205ENST00000469043 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
SCFD1-205ENST00000469043 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
SCFD1-205ENST00000469043 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-205ENST00000469043 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.9
SCFD1-205ENST00000469043 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-205ENST00000469043 PTK2Q05397 1052 aa9.39□□□□□ -0.91
SCFD1-205ENST00000469043 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
SCFD1-205ENST00000469043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.912e-7■□□□□ 8.5
SCFD1-205ENST00000469043 PPP2R2DQ66LE6 453 aa9.39□□□□□ -0.91
SCFD1-205ENST00000469043 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-205ENST00000469043 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
SCFD1-205ENST00000469043 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-205ENST00000469043 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
SCFD1-205ENST00000469043 TTLL8A6PVC2 850 aa9.38□□□□□ -0.91
SCFD1-205ENST00000469043 NR6A1Q15406 480 aa9.38□□□□□ -0.91
SCFD1-205ENST00000469043 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
SCFD1-205ENST00000469043 AP1G2O75843 785 aa9.37□□□□□ -0.91
SCFD1-205ENST00000469043 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.37□□□□□ -0.91
SCFD1-205ENST00000469043 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
SCFD1-205ENST00000469043 Q6ZVU0 165 aa9.36□□□□□ -0.91
SCFD1-205ENST00000469043 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
SCFD1-205ENST00000469043 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-205ENST00000469043 CBLBQ13191 982 aa9.35□□□□□ -0.91
SCFD1-205ENST00000469043 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
SCFD1-205ENST00000469043 SPINT1O43278 529 aa9.33□□□□□ -0.92
SCFD1-205ENST00000469043 PTSQ03393 145 aa9.32□□□□□ -0.92
SCFD1-205ENST00000469043 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
SCFD1-205ENST00000469043 FBXO31Q5XUX0 539 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-205ENST00000469043 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
SCFD1-205ENST00000469043 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
SCFD1-205ENST00000469043 BCANQ96GW7 911 aa9.31□□□□□ -0.92
SCFD1-205ENST00000469043 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
SCFD1-205ENST00000469043 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
SCFD1-205ENST00000469043 USP17L8P0C7I0 530 aa9.28□□□□□ -0.92
SCFD1-205ENST00000469043 RELBQ01201 579 aa9.28□□□□□ -0.92
SCFD1-205ENST00000469043 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
SCFD1-205ENST00000469043 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
SCFD1-205ENST00000469043 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
SCFD1-205ENST00000469043 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
SCFD1-205ENST00000469043 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-205ENST00000469043 RFC5P40937 340 aa9.26□□□□□ -0.93
SCFD1-205ENST00000469043 RAB15P59190 212 aa9.26□□□□□ -0.93
SCFD1-205ENST00000469043 NANOS1Q8WY41 292 aaKnown RBP9.26□□□□□ -0.93
SCFD1-205ENST00000469043 INSM2Q96T92 566 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-205ENST00000469043 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
SCFD1-205ENST00000469043 CTSOP43234 321 aaPredicted RBP9.25□□□□□ -0.93
SCFD1-205ENST00000469043 GPR161Q8N6U8 529 aaKnown RBP9.25□□□□□ -0.93
SCFD1-205ENST00000469043 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
SCFD1-205ENST00000469043 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
SCFD1-205ENST00000469043 HMX1Q9NP08 348 aaPredicted RBP9.25□□□□□ -0.93
SCFD1-205ENST00000469043 TMPRSS4Q9NRS4 437 aa9.25□□□□□ -0.93
SCFD1-205ENST00000469043 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
SCFD1-205ENST00000469043 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-205ENST00000469043 ZNF395Q9H8N7 513 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-205ENST00000469043 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
SCFD1-205ENST00000469043 ZNF784Q8NCA9 323 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-205ENST00000469043 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-205ENST00000469043 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
SCFD1-205ENST00000469043 ADH1AP07327 375 aa9.22□□□□□ -0.93
SCFD1-205ENST00000469043 ITGA6P23229 1130 aa9.22□□□□□ -0.93
SCFD1-205ENST00000469043 SV2AQ7L0J3 742 aa9.22□□□□□ -0.93
SCFD1-205ENST00000469043 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
SCFD1-205ENST00000469043 PTGIRP43119 386 aa9.21□□□□□ -0.94
SCFD1-205ENST00000469043 KRT76Q01546 638 aa9.21□□□□□ -0.94
SCFD1-205ENST00000469043 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
SCFD1-205ENST00000469043 RNF217Q8TC41 542 aa9.21□□□□□ -0.94
SCFD1-205ENST00000469043 CDC14CA4D256 554 aa9.2□□□□□ -0.94
SCFD1-205ENST00000469043 ESPNB1AK53 854 aa9.2□□□□□ -0.94
SCFD1-205ENST00000469043 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
SCFD1-205ENST00000469043 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
SCFD1-205ENST00000469043 LILRA1O75019 489 aa9.19□□□□□ -0.94
SCFD1-205ENST00000469043 ZBBXA8MT70 800 aa9.18□□□□□ -0.94
SCFD1-205ENST00000469043 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
SCFD1-205ENST00000469043 LYSMD3Q7Z3D4 306 aa9.18□□□□□ -0.94
SCFD1-205ENST00000469043 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
SCFD1-205ENST00000469043 TRIM34Q9BYJ4 488 aa9.17□□□□□ -0.94
SCFD1-205ENST00000469043 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
SCFD1-205ENST00000469043 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-205ENST00000469043 SVOPQ8N4V2 548 aa9.16□□□□□ -0.94
SCFD1-205ENST00000469043 CYLDQ9NQC7 956 aa9.16□□□□□ -0.94
SCFD1-205ENST00000469043 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
SCFD1-205ENST00000469043 RNFT1Q5M7Z0 435 aa9.15□□□□□ -0.94
SCFD1-205ENST00000469043 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-205ENST00000469043 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-205ENST00000469043 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
SCFD1-205ENST00000469043 RNF144AP50876 292 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-205ENST00000469043 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-205ENST00000469043 NEUROD2Q15784 382 aa9.14□□□□□ -0.95
SCFD1-205ENST00000469043 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
SCFD1-205ENST00000469043 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
SCFD1-205ENST00000469043 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
SCFD1-205ENST00000469043 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-205ENST00000469043 SLURP2P0DP57 97 aa9.13□□□□□ -0.95
SCFD1-205ENST00000469043 ZNF385CQ66K41 422 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-205ENST00000469043 PRICKLE2Q7Z3G6 844 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms