RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 PLCH1Q4KWH8 1693 aa15.94■□□□□ 0.14
RNF13-208ENST00000467996 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
RNF13-208ENST00000467996 COL14A1Q05707 1796 aaKnown RBP15.93■□□□□ 0.14
RNF13-208ENST00000467996 INSRP06213 1382 aa15.93■□□□□ 0.14
RNF13-208ENST00000467996 ARHGEF25Q86VW2 580 aa15.93■□□□□ 0.14
RNF13-208ENST00000467996 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
RNF13-208ENST00000467996 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
RNF13-208ENST00000467996 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
RNF13-208ENST00000467996 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
RNF13-208ENST00000467996 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
RNF13-208ENST00000467996 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
RNF13-208ENST00000467996 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
RNF13-208ENST00000467996 HOXC9P31274 260 aa15.91■□□□□ 0.14
RNF13-208ENST00000467996 AMPHP49418 695 aa15.91■□□□□ 0.14
RNF13-208ENST00000467996 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
RNF13-208ENST00000467996 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
RNF13-208ENST00000467996 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
RNF13-208ENST00000467996 LRP6O75581 1613 aa15.88■□□□□ 0.13
RNF13-208ENST00000467996 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
RNF13-208ENST00000467996 IP6K1Q92551 441 aa15.88■□□□□ 0.13
RNF13-208ENST00000467996 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
RNF13-208ENST00000467996 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
RNF13-208ENST00000467996 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
RNF13-208ENST00000467996 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
RNF13-208ENST00000467996 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
RNF13-208ENST00000467996 SPATA31A6Q5VVP1 1343 aa15.87■□□□□ 0.13
RNF13-208ENST00000467996 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
RNF13-208ENST00000467996 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
RNF13-208ENST00000467996 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
RNF13-208ENST00000467996 IL13P35225 146 aa15.85■□□□□ 0.13
RNF13-208ENST00000467996 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
RNF13-208ENST00000467996 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
RNF13-208ENST00000467996 AXIN2Q9Y2T1 843 aa15.85■□□□□ 0.13
RNF13-208ENST00000467996 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
RNF13-208ENST00000467996 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
RNF13-208ENST00000467996 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
RNF13-208ENST00000467996 NUDCQ9Y266 331 aa15.83■□□□□ 0.12
RNF13-208ENST00000467996 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.82■□□□□ 0.12
RNF13-208ENST00000467996 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
RNF13-208ENST00000467996 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
RNF13-208ENST00000467996 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
RNF13-208ENST00000467996 LTV1Q96GA3 475 aaPredicted RBP15.82■□□□□ 0.12
RNF13-208ENST00000467996 ERBB3P21860 1342 aa15.82■□□□□ 0.12
RNF13-208ENST00000467996 WNK3Q9BYP7 1800 aa15.82■□□□□ 0.12
RNF13-208ENST00000467996 SLIT2O94813 1529 aa15.8■□□□□ 0.12
RNF13-208ENST00000467996 NCAPD2Q15021 1401 aa15.8■□□□□ 0.12
RNF13-208ENST00000467996 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
RNF13-208ENST00000467996 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
RNF13-208ENST00000467996 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.12
RNF13-208ENST00000467996 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
RNF13-208ENST00000467996 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
RNF13-208ENST00000467996 EYA1Q99502 592 aa15.78■□□□□ 0.12
RNF13-208ENST00000467996 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.12
RNF13-208ENST00000467996 KDRP35968 1356 aa15.77■□□□□ 0.12
RNF13-208ENST00000467996 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
RNF13-208ENST00000467996 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
RNF13-208ENST00000467996 HMOX1P09601 288 aa15.76■□□□□ 0.11
RNF13-208ENST00000467996 CSB-PGBD3P0DP91 1061 aa15.76■□□□□ 0.11
RNF13-208ENST00000467996 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
RNF13-208ENST00000467996 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
RNF13-208ENST00000467996 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
RNF13-208ENST00000467996 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 AEBP1Q8IUX7 1158 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 STRN4Q9NRL3 753 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 CRB1P82279 1406 aa15.75■□□□□ 0.11
RNF13-208ENST00000467996 MEX3CQ5U5Q3 659 aaKnown RBP15.74■□□□□ 0.11
RNF13-208ENST00000467996 PKD1L3Q7Z443 1732 aa15.74■□□□□ 0.11
RNF13-208ENST00000467996 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 FCHSD2O94868 740 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 EVA1CP58658 441 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 LARP1Q6PKG0 1096 aaKnown RBP15.73■□□□□ 0.11
RNF13-208ENST00000467996 PLEKHF1Q96S99 279 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 NLRP2Q9NX02 1062 aa15.73■□□□□ 0.11
RNF13-208ENST00000467996 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
RNF13-208ENST00000467996 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
RNF13-208ENST00000467996 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
RNF13-208ENST00000467996 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
RNF13-208ENST00000467996 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.11
RNF13-208ENST00000467996 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.11
RNF13-208ENST00000467996 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
RNF13-208ENST00000467996 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
RNF13-208ENST00000467996 MEGF6O75095 1541 aa15.71■□□□□ 0.11
RNF13-208ENST00000467996 VIRMAQ69YN4 1812 aaKnown RBP15.71■□□□□ 0.1
RNF13-208ENST00000467996 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
RNF13-208ENST00000467996 MAPK8IP3Q9UPT6 1336 aa15.69■□□□□ 0.1
RNF13-208ENST00000467996 UNC5CLQ8IV45 518 aa15.69■□□□□ 0.1
RNF13-208ENST00000467996 AFF2P51816 1311 aa15.68■□□□□ 0.1
RNF13-208ENST00000467996 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
RNF13-208ENST00000467996 HNRNPUQ00839 825 aaKnown RBP eCLIP15.68■□□□□ 0.1
RNF13-208ENST00000467996 NEFMP07197 916 aa15.67■□□□□ 0.1
RNF13-208ENST00000467996 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
RNF13-208ENST00000467996 USP21Q9UK80 565 aa15.67■□□□□ 0.1
RNF13-208ENST00000467996 LRRC37A3O60309 1634 aa15.67■□□□□ 0.1
RNF13-208ENST00000467996 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
RNF13-208ENST00000467996 DISP2A7MBM2 1401 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms