RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 USP54Q70EL1 1684 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 IQSEC2Q5JU85 1478 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 MYOM1P52179 1685 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 HMOX1P09601 288 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
KPNA1-204ENST00000466923 USP21Q9UK80 565 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 TOM1L2Q6ZVM7 507 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 FAM9BQ8IZU0 186 aa6.66□□□□□ -1.34
KPNA1-204ENST00000466923 SALL2Q9Y467 1007 aaPredicted RBP6.66□□□□□ -1.34
KPNA1-204ENST00000466923 HOXC9P31274 260 aa6.65□□□□□ -1.35
KPNA1-204ENST00000466923 AFF2P51816 1311 aa6.65□□□□□ -1.35
KPNA1-204ENST00000466923 FAM182BQ5T319 152 aa6.65□□□□□ -1.35
KPNA1-204ENST00000466923 MRS2Q9HD23 443 aa6.65□□□□□ -1.35
KPNA1-204ENST00000466923 ANKRD24Q8TF21 1146 aa6.65□□□□□ -1.35
KPNA1-204ENST00000466923 QTRT2Q9H974 415 aaKnown RBP6.65□□□□□ -1.35
KPNA1-204ENST00000466923 ITSN1Q15811 1721 aa6.64□□□□□ -1.35
KPNA1-204ENST00000466923 TOPAZ1Q8N9V7 1692 aa6.64□□□□□ -1.35
KPNA1-204ENST00000466923 COL16A1Q07092 1604 aaPredicted RBP6.64□□□□□ -1.35
KPNA1-204ENST00000466923 NBPF6Q5VWK0 638 aa6.64□□□□□ -1.35
KPNA1-204ENST00000466923 AEBP1Q8IUX7 1158 aa6.64□□□□□ -1.35
KPNA1-204ENST00000466923 NBPF4Q96M43 638 aa6.64□□□□□ -1.35
KPNA1-204ENST00000466923 USP19O94966 1318 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 SPATA31A6Q5VVP1 1343 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 U2AF1Q01081 240 aaKnown RBP eCLIP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 FAM98CQ17RN3 349 aaKnown RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 IP6K1Q92551 441 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 MED1Q15648 1581 aaPredicted RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 LRP6O75581 1613 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 RALBP1Q15311 655 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 NEUROD2Q15784 382 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 PIK3C2AO00443 1686 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 OVOS2A0A0J9YW53 1432 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 OVOS2Q6IE36 1432 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 SULT6B1Q6IMI4 303 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 CCDC146Q8IYE0 955 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 RGS17Q9UGC6 210 aaPredicted RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 KIF1AQ12756 1690 aa6.63□□□□□ -1.35
KPNA1-204ENST00000466923 AHDC1Q5TGY3 1603 aaPredicted RBP6.63□□□□□ -1.35
KPNA1-204ENST00000466923 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 DIAPH1O60610 1272 aaKnown RBP6.62□□□□□ -1.35
KPNA1-204ENST00000466923 NBR1Q14596 966 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 EYA1Q99502 592 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 NHSL1Q5SYE7 1610 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 MYBBP1AQ9BQG0 1328 aaKnown RBP6.62□□□□□ -1.35
KPNA1-204ENST00000466923 UNC5CLQ8IV45 518 aa6.62□□□□□ -1.35
KPNA1-204ENST00000466923 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
KPNA1-204ENST00000466923 DDX54Q8TDD1 881 aaKnown RBP6.61□□□□□ -1.35
KPNA1-204ENST00000466923 AKAP12Q02952 1782 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 CFAP53Q96M91 514 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 ADAMTS8Q9UP79 889 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 TRPM3Q9HCF6 1732 aaPredicted RBP6.61□□□□□ -1.35
KPNA1-204ENST00000466923 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 GOLGB1Q14789 3259 aaKnown RBP6.61□□□□□ -1.35
KPNA1-204ENST00000466923 ERBB3P21860 1342 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 RRP7AQ9Y3A4 280 aaKnown RBP6.61□□□□□ -1.35
KPNA1-204ENST00000466923 MON2Q7Z3U7 1717 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 PARD3Q8TEW0 1356 aa6.61□□□□□ -1.35
KPNA1-204ENST00000466923 FNBP4Q8N3X1 1017 aaPredicted RBP6.6□□□□□ -1.35
KPNA1-204ENST00000466923 CAMTA1Q9Y6Y1 1673 aa6.6□□□□□ -1.35
KPNA1-204ENST00000466923 BRD4O60885 1362 aaPredicted RBP6.6□□□□□ -1.35
KPNA1-204ENST00000466923 FLT4P35916 1363 aa6.6□□□□□ -1.35
KPNA1-204ENST00000466923 IL13P35225 146 aa6.6□□□□□ -1.35
KPNA1-204ENST00000466923 NSD2O96028 1365 aa6.6□□□□□ -1.35
KPNA1-204ENST00000466923 MAP2P11137 1827 aaKnown RBP6.6□□□□□ -1.35
KPNA1-204ENST00000466923 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
KPNA1-204ENST00000466923 GJD4Q96KN9 370 aaPredicted RBP6.6□□□□□ -1.35
KPNA1-204ENST00000466923 ALS2Q96Q42 1657 aa6.59□□□□□ -1.35
KPNA1-204ENST00000466923 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
KPNA1-204ENST00000466923 PHACTR3Q96KR7 559 aa6.59□□□□□ -1.35
KPNA1-204ENST00000466923 TRPC5Q9UL62 973 aaPredicted RBP6.59□□□□□ -1.35
KPNA1-204ENST00000466923 NUDCQ9Y266 331 aa6.59□□□□□ -1.35
KPNA1-204ENST00000466923 WDR17Q8IZU2 1322 aa6.59□□□□□ -1.36
KPNA1-204ENST00000466923 BCL9LQ86UU0 1499 aa6.59□□□□□ -1.36
KPNA1-204ENST00000466923 EIF5BO60841 1220 aaKnown RBP6.58□□□□□ -1.36
KPNA1-204ENST00000466923 PRKAR2BP31323 418 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 NRKQ7Z2Y5 1582 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 NPC1L1Q9UHC9 1359 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 UTRNP46939 3433 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 RXRBP28702 533 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 TCP11L2Q8N4U5 519 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 RAPGEF4Q8WZA2 1011 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 CPDO75976 1380 aa6.58□□□□□ -1.36
KPNA1-204ENST00000466923 ZNF772Q68DY9 489 aaPredicted RBP6.58□□□□□ -1.36
KPNA1-204ENST00000466923 SYTL4Q96C24 671 aaPredicted RBP6.58□□□□□ -1.36
KPNA1-204ENST00000466923 INSRP06213 1382 aa6.57□□□□□ -1.36
KPNA1-204ENST00000466923 SEPT12Q8IYM1 358 aa6.57□□□□□ -1.36
KPNA1-204ENST00000466923 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
KPNA1-204ENST00000466923 NFAT5O94916 1531 aa6.57□□□□□ -1.36
KPNA1-204ENST00000466923 DCTN1Q14203 1278 aa6.57□□□□□ -1.36
KPNA1-204ENST00000466923 SPATA31A1Q5TZJ5 1347 aa6.57□□□□□ -1.36
KPNA1-204ENST00000466923 VPS72Q15906 364 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 ACSBG1Q96GR2 724 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 SPATA31A5Q5VU36 1347 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 SPATA31A7Q8IWB4 1347 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 RGPD5Q99666 1765 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms