RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 KCNH5Q8NCM2 988 aa22.27■■□□□ 1.15
NELFCD-201ENST00000460601 RSPH6AQ9H0K4 717 aa22.27■■□□□ 1.15
NELFCD-201ENST00000460601 AEBP1Q8IUX7 1158 aa22.26■■□□□ 1.15
NELFCD-201ENST00000460601 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
NELFCD-201ENST00000460601 ROBO1Q9Y6N7 1651 aa22.25■■□□□ 1.15
NELFCD-201ENST00000460601 ZC3H6P61129 1189 aaKnown RBP22.24■■□□□ 1.15
NELFCD-201ENST00000460601 LTV1Q96GA3 475 aaPredicted RBP22.24■■□□□ 1.15
NELFCD-201ENST00000460601 ZNF521Q96K83 1311 aa22.23■■□□□ 1.15
NELFCD-201ENST00000460601 FCHSD2O94868 740 aa22.23■■□□□ 1.15
NELFCD-201ENST00000460601 NHSL1Q5SYE7 1610 aa22.23■■□□□ 1.15
NELFCD-201ENST00000460601 ARHGEF25Q86VW2 580 aa22.22■■□□□ 1.15
NELFCD-201ENST00000460601 PHACTR3Q96KR7 559 aa22.22■■□□□ 1.15
NELFCD-201ENST00000460601 SULT6B1Q6IMI4 303 aa22.22■■□□□ 1.15
NELFCD-201ENST00000460601 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
NELFCD-201ENST00000460601 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
NELFCD-201ENST00000460601 MAPK8IP3Q9UPT6 1336 aa22.21■■□□□ 1.15
NELFCD-201ENST00000460601 IP6K1Q92551 441 aa22.2■■□□□ 1.14
NELFCD-201ENST00000460601 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
NELFCD-201ENST00000460601 KIF24Q5T7B8 1368 aa22.2■■□□□ 1.14
NELFCD-201ENST00000460601 EYA1Q99502 592 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
NELFCD-201ENST00000460601 AXIN2Q9Y2T1 843 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 RTL1A6NKG5 1358 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 WWC1Q8IX03 1113 aa22.19■■□□□ 1.14
NELFCD-201ENST00000460601 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
NELFCD-201ENST00000460601 PIP4K2BP78356 416 aa22.18■■□□□ 1.14
NELFCD-201ENST00000460601 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
NELFCD-201ENST00000460601 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
NELFCD-201ENST00000460601 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
NELFCD-201ENST00000460601 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
NELFCD-201ENST00000460601 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
NELFCD-201ENST00000460601 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
NELFCD-201ENST00000460601 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
NELFCD-201ENST00000460601 SUPT16HQ9Y5B9 1047 aaKnown RBP22.14■■□□□ 1.13
NELFCD-201ENST00000460601 RGPD5Q99666 1765 aa22.14■■□□□ 1.13
NELFCD-201ENST00000460601 RIPK4P57078 832 aa22.13■■□□□ 1.13
NELFCD-201ENST00000460601 PNNQ9H307 717 aaKnown RBP22.13■■□□□ 1.13
NELFCD-201ENST00000460601 KIAA0232Q92628 1395 aa22.13■■□□□ 1.13
NELFCD-201ENST00000460601 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
NELFCD-201ENST00000460601 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
NELFCD-201ENST00000460601 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
NELFCD-201ENST00000460601 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
NELFCD-201ENST00000460601 KDRP35968 1356 aa22.11■■□□□ 1.13
NELFCD-201ENST00000460601 TOM1O60784 492 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 NEFMP07197 916 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 DUSP27Q5VZP5 1158 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 AHDC1Q5TGY3 1603 aaPredicted RBP22.1■■□□□ 1.13
NELFCD-201ENST00000460601 UBAP1LF5GYI3 381 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
NELFCD-201ENST00000460601 ABCA3Q99758 1704 aa22.09■■□□□ 1.13
NELFCD-201ENST00000460601 HAP1P54257 671 aaPredicted RBP22.09■■□□□ 1.13
NELFCD-201ENST00000460601 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
NELFCD-201ENST00000460601 NGEFQ8N5V2 710 aa22.09■■□□□ 1.13
NELFCD-201ENST00000460601 NFE2L2Q16236 605 aa22.08■■□□□ 1.13
NELFCD-201ENST00000460601 COL18A1P39060 1754 aa22.08■■□□□ 1.12
NELFCD-201ENST00000460601 THUMPD2Q9BTF0 503 aaKnown RBP22.07■■□□□ 1.12
NELFCD-201ENST00000460601 ERBB3P21860 1342 aa22.07■■□□□ 1.12
NELFCD-201ENST00000460601 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
NELFCD-201ENST00000460601 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
NELFCD-201ENST00000460601 CPDO75976 1380 aa22.05■■□□□ 1.12
NELFCD-201ENST00000460601 PRDM11Q9NQV5 511 aa22.05■■□□□ 1.12
NELFCD-201ENST00000460601 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
NELFCD-201ENST00000460601 TRMT2AQ8IZ69 625 aaKnown RBP22.04■■□□□ 1.12
NELFCD-201ENST00000460601 E9PSI1 815 aa22.04■■□□□ 1.12
NELFCD-201ENST00000460601 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
NELFCD-201ENST00000460601 MTHFSDQ2M296 383 aaKnown RBP22.04■■□□□ 1.12
NELFCD-201ENST00000460601 IRX6P78412 446 aaPredicted RBP22.03■■□□□ 1.12
NELFCD-201ENST00000460601 COL16A1Q07092 1604 aaPredicted RBP22.03■■□□□ 1.12
NELFCD-201ENST00000460601 WDR63Q8IWG1 891 aa22.03■■□□□ 1.12
NELFCD-201ENST00000460601 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
NELFCD-201ENST00000460601 NCBP3Q53F19 620 aaKnown RBP22.01■■□□□ 1.11
NELFCD-201ENST00000460601 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
NELFCD-201ENST00000460601 CAMTA1Q9Y6Y1 1673 aa22■■□□□ 1.11
NELFCD-201ENST00000460601 RCAN3Q9UKA8 241 aa22■■□□□ 1.11
NELFCD-201ENST00000460601 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
NELFCD-201ENST00000460601 NLRP2Q9NX02 1062 aa21.99■■□□□ 1.11
NELFCD-201ENST00000460601 MCM10Q7L590 875 aa21.98■■□□□ 1.11
NELFCD-201ENST00000460601 LMO7Q8WWI1 1683 aa21.98■■□□□ 1.11
NELFCD-201ENST00000460601 FKBP8Q14318 412 aa21.97■■□□□ 1.11
NELFCD-201ENST00000460601 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
NELFCD-201ENST00000460601 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
NELFCD-201ENST00000460601 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
NELFCD-201ENST00000460601 ABCC6O95255 1503 aa21.96■■□□□ 1.11
NELFCD-201ENST00000460601 COL22A1Q8NFW1 1626 aaPredicted RBP21.96■■□□□ 1.11
NELFCD-201ENST00000460601 COL5A2P05997 1499 aaPredicted RBP21.94■■□□□ 1.1
NELFCD-201ENST00000460601 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
NELFCD-201ENST00000460601 FAM208AQ9UK61 1670 aaKnown RBP21.93■■□□□ 1.1
NELFCD-201ENST00000460601 GAS2L2Q8NHY3 880 aa21.92■■□□□ 1.1
NELFCD-201ENST00000460601 MYH16Q9H6N6 1097 aa21.92■■□□□ 1.1
NELFCD-201ENST00000460601 ADAMTS2O95450 1211 aa21.92■■□□□ 1.1
NELFCD-201ENST00000460601 LMOD3Q0VAK6 560 aa21.92■■□□□ 1.1
NELFCD-201ENST00000460601 MYT1Q01538 1121 aa21.91■■□□□ 1.1
NELFCD-201ENST00000460601 IL16Q14005 1332 aa21.91■■□□□ 1.1
NELFCD-201ENST00000460601 NUTM2BA6NNL0 878 aaPredicted RBP21.91■■□□□ 1.1
NELFCD-201ENST00000460601 NUTM2EB1AL46 878 aaPredicted RBP21.91■■□□□ 1.1
NELFCD-201ENST00000460601 NEFLP07196 543 aa21.91■■□□□ 1.1
NELFCD-201ENST00000460601 NUTM2AQ8IVF1 878 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms