RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
YIPF3-205ENST00000460547 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
YIPF3-205ENST00000460547 COL22A1Q8NFW1 1626 aaPredicted RBP22.1■■□□□ 1.13
YIPF3-205ENST00000460547 TCP11L2Q8N4U5 519 aa22.1■■□□□ 1.13
YIPF3-205ENST00000460547 CABLES1Q8TDN4 633 aa22.09■■□□□ 1.13
YIPF3-205ENST00000460547 NRKQ7Z2Y5 1582 aa22.08■■□□□ 1.12
YIPF3-205ENST00000460547 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
YIPF3-205ENST00000460547 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
YIPF3-205ENST00000460547 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
YIPF3-205ENST00000460547 AATKQ6ZMQ8 1374 aa22.07■■□□□ 1.12
YIPF3-205ENST00000460547 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
YIPF3-205ENST00000460547 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
YIPF3-205ENST00000460547 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
YIPF3-205ENST00000460547 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
YIPF3-205ENST00000460547 USP21Q9UK80 565 aa22.07■■□□□ 1.12
YIPF3-205ENST00000460547 RXRBP28702 533 aa22.06■■□□□ 1.12
YIPF3-205ENST00000460547 FNBP4Q8N3X1 1017 aaPredicted RBP22.05■■□□□ 1.12
YIPF3-205ENST00000460547 CDK12Q9NYV4 1490 aaPredicted RBP22.05■■□□□ 1.12
YIPF3-205ENST00000460547 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
YIPF3-205ENST00000460547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
YIPF3-205ENST00000460547 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
YIPF3-205ENST00000460547 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
YIPF3-205ENST00000460547 ABTB2Q8N961 1025 aa22.01■■□□□ 1.11
YIPF3-205ENST00000460547 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
YIPF3-205ENST00000460547 PLIN1O60240 522 aa22.01■■□□□ 1.11
YIPF3-205ENST00000460547 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
YIPF3-205ENST00000460547 RBM6P78332 1123 aaKnown RBP22■■□□□ 1.11
YIPF3-205ENST00000460547 NUTM2GQ5VZR2 741 aa22■■□□□ 1.11
YIPF3-205ENST00000460547 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
YIPF3-205ENST00000460547 TRPM3Q9HCF6 1732 aaPredicted RBP21.99■■□□□ 1.11
YIPF3-205ENST00000460547 NME9Q86XW9 330 aa21.99■■□□□ 1.11
YIPF3-205ENST00000460547 U2SURPO15042 1029 aaKnown RBP21.98■■□□□ 1.11
YIPF3-205ENST00000460547 CRBNQ96SW2 442 aa21.98■■□□□ 1.11
YIPF3-205ENST00000460547 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
YIPF3-205ENST00000460547 RBM19Q9Y4C8 960 aaKnown RBP21.98■■□□□ 1.11
YIPF3-205ENST00000460547 USP6P35125 1406 aa21.98■■□□□ 1.11
YIPF3-205ENST00000460547 COG3Q96JB2 828 aa21.97■■□□□ 1.11
YIPF3-205ENST00000460547 OVOS2A0A0J9YW53 1432 aa21.96■■□□□ 1.11
YIPF3-205ENST00000460547 OVOS2Q6IE36 1432 aa21.96■■□□□ 1.11
YIPF3-205ENST00000460547 UNC5CLQ8IV45 518 aa21.96■■□□□ 1.11
YIPF3-205ENST00000460547 MAPK8IP3Q9UPT6 1336 aa21.96■■□□□ 1.11
YIPF3-205ENST00000460547 MAP2P11137 1827 aaKnown RBP21.96■■□□□ 1.11
YIPF3-205ENST00000460547 SSH2Q76I76 1423 aa21.96■■□□□ 1.11
YIPF3-205ENST00000460547 FCHSD2O94868 740 aa21.95■■□□□ 1.1
YIPF3-205ENST00000460547 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
YIPF3-205ENST00000460547 FAM83GA6ND36 823 aa21.95■■□□□ 1.1
YIPF3-205ENST00000460547 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
YIPF3-205ENST00000460547 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
YIPF3-205ENST00000460547 TMPOP42166 694 aaKnown RBP21.94■■□□□ 1.1
YIPF3-205ENST00000460547 C20orf194Q5TEA3 1177 aa21.94■■□□□ 1.1
YIPF3-205ENST00000460547 TTC21BQ7Z4L5 1316 aa21.94■■□□□ 1.1
YIPF3-205ENST00000460547 BCL9LQ86UU0 1499 aa21.93■■□□□ 1.1
YIPF3-205ENST00000460547 IL16Q14005 1332 aa21.93■■□□□ 1.1
YIPF3-205ENST00000460547 NLRP6P59044 892 aa21.91■■□□□ 1.1
YIPF3-205ENST00000460547 PRDM11Q9NQV5 511 aa21.91■■□□□ 1.1
YIPF3-205ENST00000460547 SLIT2O94813 1529 aa21.91■■□□□ 1.1
YIPF3-205ENST00000460547 MARF1Q9Y4F3 1742 aaKnown RBP21.91■■□□□ 1.1
YIPF3-205ENST00000460547 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
YIPF3-205ENST00000460547 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
YIPF3-205ENST00000460547 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
YIPF3-205ENST00000460547 GJD4Q96KN9 370 aaPredicted RBP21.9■■□□□ 1.1
YIPF3-205ENST00000460547 ZRANB1Q9UGI0 708 aa21.9■■□□□ 1.1
YIPF3-205ENST00000460547 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
YIPF3-205ENST00000460547 ATRNO75882 1429 aa21.9■■□□□ 1.1
YIPF3-205ENST00000460547 USP31Q70CQ4 1352 aa21.9■■□□□ 1.1
YIPF3-205ENST00000460547 TTC21AQ8NDW8 1320 aa21.89■■□□□ 1.1
YIPF3-205ENST00000460547 IL13P35225 146 aa21.89■■□□□ 1.1
YIPF3-205ENST00000460547 BTG4Q9NY30 223 aa21.89■■□□□ 1.1
YIPF3-205ENST00000460547 TRIM35Q9UPQ4 493 aa21.89■■□□□ 1.1
YIPF3-205ENST00000460547 CCDC9Q9Y3X0 531 aaKnown RBP21.89■■□□□ 1.1
YIPF3-205ENST00000460547 PDE3AQ14432 1141 aa21.88■■□□□ 1.09
YIPF3-205ENST00000460547 BCAR3O75815 825 aa21.88■■□□□ 1.09
YIPF3-205ENST00000460547 GCP02774 474 aa21.88■■□□□ 1.09
YIPF3-205ENST00000460547 RARSP54136 660 aaKnown RBP21.86■■□□□ 1.09
YIPF3-205ENST00000460547 KIAA0232Q92628 1395 aa21.86■■□□□ 1.09
YIPF3-205ENST00000460547 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
YIPF3-205ENST00000460547 PPM1GO15355 546 aaPredicted RBP21.85■■□□□ 1.09
YIPF3-205ENST00000460547 FBLN1P23142 703 aa21.85■■□□□ 1.09
YIPF3-205ENST00000460547 CHRNA2Q15822 529 aa21.85■■□□□ 1.09
YIPF3-205ENST00000460547 VPS72Q15906 364 aa21.85■■□□□ 1.09
YIPF3-205ENST00000460547 USP19O94966 1318 aa21.85■■□□□ 1.09
YIPF3-205ENST00000460547 FANCIQ9NVI1 1328 aa21.84■■□□□ 1.09
YIPF3-205ENST00000460547 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
YIPF3-205ENST00000460547 USP54Q70EL1 1684 aa21.84■■□□□ 1.09
YIPF3-205ENST00000460547 NEFMP07197 916 aa21.83■■□□□ 1.09
YIPF3-205ENST00000460547 RIPK4P57078 832 aa21.83■■□□□ 1.09
YIPF3-205ENST00000460547 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.08
YIPF3-205ENST00000460547 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
YIPF3-205ENST00000460547 RGS12O14924 1447 aa21.81■■□□□ 1.08
YIPF3-205ENST00000460547 EVA1CP58658 441 aa21.81■■□□□ 1.08
YIPF3-205ENST00000460547 RRS1Q15050 365 aaKnown RBP21.81■■□□□ 1.08
YIPF3-205ENST00000460547 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
YIPF3-205ENST00000460547 KCNH5Q8NCM2 988 aa21.81■■□□□ 1.08
YIPF3-205ENST00000460547 TCERG1O14776 1098 aaKnown RBP21.8■■□□□ 1.08
YIPF3-205ENST00000460547 COL14A1Q05707 1796 aaKnown RBP21.8■■□□□ 1.08
YIPF3-205ENST00000460547 PIK3C2AO00443 1686 aa21.8■■□□□ 1.08
YIPF3-205ENST00000460547 PEAK1Q9H792 1746 aa21.8■■□□□ 1.08
YIPF3-205ENST00000460547 STRN4Q9NRL3 753 aa21.79■■□□□ 1.08
YIPF3-205ENST00000460547 RGPD1P0DJD0 1748 aa21.79■■□□□ 1.08
YIPF3-205ENST00000460547 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms