RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 RALBP1Q15311 655 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 BCS1LQ9Y276 419 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 BRD4O60885 1362 aaPredicted RBP12.66□□□□□ -0.38
EPB41-208ENST00000460378 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
EPB41-208ENST00000460378 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
EPB41-208ENST00000460378 JDP2Q8WYK2 163 aa12.65□□□□□ -0.38
EPB41-208ENST00000460378 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
EPB41-208ENST00000460378 GRM1Q13255 1194 aa12.65□□□□□ -0.38
EPB41-208ENST00000460378 CHMP4BQ9H444 224 aaKnown RBP12.65□□□□□ -0.38
EPB41-208ENST00000460378 FCHSD2O94868 740 aa12.65□□□□□ -0.38
EPB41-208ENST00000460378 YY1P25490 414 aa12.65□□□□□ -0.38
EPB41-208ENST00000460378 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
EPB41-208ENST00000460378 ADGRB3O60242 1522 aa12.64□□□□□ -0.39
EPB41-208ENST00000460378 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
EPB41-208ENST00000460378 ZBTB7AO95365 584 aa12.64□□□□□ -0.39
EPB41-208ENST00000460378 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
EPB41-208ENST00000460378 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 ROBO2Q9HCK4 1378 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
EPB41-208ENST00000460378 IP6K1Q92551 441 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
EPB41-208ENST00000460378 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
EPB41-208ENST00000460378 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
EPB41-208ENST00000460378 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 AIDAQ96BJ3 306 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
EPB41-208ENST00000460378 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
EPB41-208ENST00000460378 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
EPB41-208ENST00000460378 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
EPB41-208ENST00000460378 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
EPB41-208ENST00000460378 BTBD11A6QL63 1104 aa12.61□□□□□ -0.39
EPB41-208ENST00000460378 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
EPB41-208ENST00000460378 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
EPB41-208ENST00000460378 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
EPB41-208ENST00000460378 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
EPB41-208ENST00000460378 RNF17Q9BXT8 1623 aaKnown RBP12.6□□□□□ -0.39
EPB41-208ENST00000460378 NBPF6Q5VWK0 638 aa12.6□□□□□ -0.39
EPB41-208ENST00000460378 NBPF5PQ86XG9 351 aaPredicted RBP12.6□□□□□ -0.39
EPB41-208ENST00000460378 NBPF4Q96M43 638 aa12.6□□□□□ -0.39
EPB41-208ENST00000460378 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
EPB41-208ENST00000460378 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
EPB41-208ENST00000460378 DCCP43146 1447 aa12.59□□□□□ -0.39
EPB41-208ENST00000460378 H0YIN7 160 aa12.59□□□□□ -0.39
EPB41-208ENST00000460378 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
EPB41-208ENST00000460378 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.39
EPB41-208ENST00000460378 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
EPB41-208ENST00000460378 MS4A1P11836 297 aa12.58□□□□□ -0.4
EPB41-208ENST00000460378 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
EPB41-208ENST00000460378 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
EPB41-208ENST00000460378 ANKARQ7Z5J8 1434 aa12.57□□□□□ -0.4
EPB41-208ENST00000460378 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
EPB41-208ENST00000460378 WDR17Q8IZU2 1322 aa12.57□□□□□ -0.4
EPB41-208ENST00000460378 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
EPB41-208ENST00000460378 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
EPB41-208ENST00000460378 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
EPB41-208ENST00000460378 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
EPB41-208ENST00000460378 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
EPB41-208ENST00000460378 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
EPB41-208ENST00000460378 NF2P35240 595 aa12.56□□□□□ -0.4
EPB41-208ENST00000460378 CTDP1Q9Y5B0 961 aaPredicted RBP12.56□□□□□ -0.4
EPB41-208ENST00000460378 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
EPB41-208ENST00000460378 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
EPB41-208ENST00000460378 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.41e-14■■■■□ 19.3
EPB41-208ENST00000460378 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 RIPK4P57078 832 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 DCAF5Q96JK2 942 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 INO80Q9ULG1 1556 aaPredicted RBP12.55□□□□□ -0.4
EPB41-208ENST00000460378 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
EPB41-208ENST00000460378 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
EPB41-208ENST00000460378 KCNQ2O43526 872 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
EPB41-208ENST00000460378 TPTE2Q6XPS3 522 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
EPB41-208ENST00000460378 FLT4P35916 1363 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
EPB41-208ENST00000460378 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
EPB41-208ENST00000460378 RBM5P52756 815 aaKnown RBP eCLIP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms