RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 HOXC9P31274 260 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 AMPHP49418 695 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 EVA1CP58658 441 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 POTEAQ6S8J7 498 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
MECP2-206ENST00000460227 SOCS7O14512 581 aa17.46■□□□□ 0.39
MECP2-206ENST00000460227 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
MECP2-206ENST00000460227 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
MECP2-206ENST00000460227 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
MECP2-206ENST00000460227 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
MECP2-206ENST00000460227 VPS72Q15906 364 aa17.45■□□□□ 0.38
MECP2-206ENST00000460227 PHRF1Q9P1Y6 1649 aaKnown RBP17.45■□□□□ 0.38
MECP2-206ENST00000460227 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
MECP2-206ENST00000460227 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
MECP2-206ENST00000460227 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
MECP2-206ENST00000460227 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
MECP2-206ENST00000460227 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
MECP2-206ENST00000460227 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
MECP2-206ENST00000460227 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
MECP2-206ENST00000460227 ABCA3Q99758 1704 aa17.43■□□□□ 0.38
MECP2-206ENST00000460227 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
MECP2-206ENST00000460227 ATRNO75882 1429 aa17.41■□□□□ 0.38
MECP2-206ENST00000460227 MTHFSP49914 203 aa17.41■□□□□ 0.38
MECP2-206ENST00000460227 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
MECP2-206ENST00000460227 ONECUT3O60422 494 aaPredicted RBP17.4■□□□□ 0.38
MECP2-206ENST00000460227 RXRBP28702 533 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
MECP2-206ENST00000460227 RALBP1Q15311 655 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
MECP2-206ENST00000460227 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 INSRP06213 1382 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 FLT4P35916 1363 aa17.4■□□□□ 0.38
MECP2-206ENST00000460227 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
MECP2-206ENST00000460227 ERBB3P21860 1342 aa17.39■□□□□ 0.37
MECP2-206ENST00000460227 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
MECP2-206ENST00000460227 COL5A2P05997 1499 aaPredicted RBP17.38■□□□□ 0.37
MECP2-206ENST00000460227 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
MECP2-206ENST00000460227 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
MECP2-206ENST00000460227 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
MECP2-206ENST00000460227 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
MECP2-206ENST00000460227 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
MECP2-206ENST00000460227 COL18A1P39060 1754 aa17.38■□□□□ 0.37
MECP2-206ENST00000460227 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
MECP2-206ENST00000460227 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
MECP2-206ENST00000460227 TOM1L2Q6ZVM7 507 aa17.37■□□□□ 0.37
MECP2-206ENST00000460227 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
MECP2-206ENST00000460227 ABCC6O95255 1503 aa17.37■□□□□ 0.37
MECP2-206ENST00000460227 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
MECP2-206ENST00000460227 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
MECP2-206ENST00000460227 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
MECP2-206ENST00000460227 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
MECP2-206ENST00000460227 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
MECP2-206ENST00000460227 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
MECP2-206ENST00000460227 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
MECP2-206ENST00000460227 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
MECP2-206ENST00000460227 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
MECP2-206ENST00000460227 IL13P35225 146 aa17.34■□□□□ 0.37
MECP2-206ENST00000460227 CRB1P82279 1406 aa17.34■□□□□ 0.37
MECP2-206ENST00000460227 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
MECP2-206ENST00000460227 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.36
MECP2-206ENST00000460227 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
MECP2-206ENST00000460227 EYA1Q99502 592 aa17.32■□□□□ 0.36
MECP2-206ENST00000460227 ANKRD26Q9UPS8 1709 aa17.31■□□□□ 0.36
MECP2-206ENST00000460227 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
MECP2-206ENST00000460227 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
MECP2-206ENST00000460227 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
MECP2-206ENST00000460227 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
MECP2-206ENST00000460227 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
MECP2-206ENST00000460227 ANP32CO43423 234 aa17.29■□□□□ 0.36
MECP2-206ENST00000460227 NRAPQ86VF7 1730 aa17.29■□□□□ 0.36
MECP2-206ENST00000460227 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
MECP2-206ENST00000460227 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
MECP2-206ENST00000460227 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
MECP2-206ENST00000460227 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
MECP2-206ENST00000460227 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.36
MECP2-206ENST00000460227 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
MECP2-206ENST00000460227 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
MECP2-206ENST00000460227 LTN1O94822 1766 aa17.26■□□□□ 0.35
MECP2-206ENST00000460227 IL2RBP14784 551 aa17.26■□□□□ 0.35
MECP2-206ENST00000460227 GLI3P10071 1580 aa17.26■□□□□ 0.35
MECP2-206ENST00000460227 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
MECP2-206ENST00000460227 EXOC5O00471 708 aa17.23■□□□□ 0.35
MECP2-206ENST00000460227 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
MECP2-206ENST00000460227 DISP2A7MBM2 1401 aa17.22■□□□□ 0.35
MECP2-206ENST00000460227 NCAPD2Q15021 1401 aa17.22■□□□□ 0.35
MECP2-206ENST00000460227 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
MECP2-206ENST00000460227 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
MECP2-206ENST00000460227 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
MECP2-206ENST00000460227 A0A0G2JS52 829 aa17.21■□□□□ 0.35
MECP2-206ENST00000460227 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
MECP2-206ENST00000460227 MYT1Q01538 1121 aa17.21■□□□□ 0.35
MECP2-206ENST00000460227 DDB1Q16531 1140 aa17.21■□□□□ 0.35
MECP2-206ENST00000460227 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
MECP2-206ENST00000460227 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
MECP2-206ENST00000460227 RGS12O14924 1447 aa17.21■□□□□ 0.34
MECP2-206ENST00000460227 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms