RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 API5Q9BZZ5 524 aaKnown RBP11.15□□□□□ -0.62
HDAC3-202ENST00000459727 ZBTB40Q9NUA8 1239 aa11.15□□□□□ -0.62
HDAC3-202ENST00000459727 NOB1Q9ULX3 412 aaKnown RBP11.15□□□□□ -0.62
HDAC3-202ENST00000459727 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.63
HDAC3-202ENST00000459727 C3P01024 1663 aa11.14□□□□□ -0.63
HDAC3-202ENST00000459727 USP19O94966 1318 aa11.14□□□□□ -0.63
HDAC3-202ENST00000459727 IL13P35225 146 aa11.14□□□□□ -0.63
HDAC3-202ENST00000459727 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
HDAC3-202ENST00000459727 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
HDAC3-202ENST00000459727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC3-202ENST00000459727 NUDT16Q96DE0 195 aaKnown RBP11.13□□□□□ -0.63
HDAC3-202ENST00000459727 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 NUCB1Q02818 461 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 METP08581 1390 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
HDAC3-202ENST00000459727 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
HDAC3-202ENST00000459727 BMP2KLQ5H9B9 411 aa11.11□□□□□ -0.63
HDAC3-202ENST00000459727 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
HDAC3-202ENST00000459727 ABCC4O15439 1325 aa11.1□□□□□ -0.63
HDAC3-202ENST00000459727 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
HDAC3-202ENST00000459727 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
HDAC3-202ENST00000459727 PTMSP20962 102 aa11.1□□□□□ -0.63
HDAC3-202ENST00000459727 KIAA0232Q92628 1395 aa11.1□□□□□ -0.63
HDAC3-202ENST00000459727 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 VAMP4O75379 141 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
HDAC3-202ENST00000459727 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
HDAC3-202ENST00000459727 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 USP31Q70CQ4 1352 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
HDAC3-202ENST00000459727 SOCS7O14512 581 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
HDAC3-202ENST00000459727 TWISTNBQ3B726 338 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-202ENST00000459727 NME9Q86XW9 330 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 EID1Q9Y6B2 187 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 NALCNQ8IZF0 1738 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 SLIT1O75093 1534 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 USP6P35125 1406 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 PTPRCP08575 1304 aa11.08□□□□□ -0.64
HDAC3-202ENST00000459727 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-202ENST00000459727 PLPPR3Q6T4P5 718 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 SNX21Q969T3 373 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 CHMP5Q9NZZ3 219 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 EMILIN1Q9Y6C2 1016 aa11.07□□□□□ -0.64
HDAC3-202ENST00000459727 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
HDAC3-202ENST00000459727 ADAMTSL3P82987 1691 aa11.06□□□□□ -0.64
HDAC3-202ENST00000459727 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-202ENST00000459727 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
HDAC3-202ENST00000459727 L1TD1Q5T7N2 865 aaKnown RBP11.06□□□□□ -0.64
HDAC3-202ENST00000459727 MBIPQ9NS73 344 aa11.06□□□□□ -0.64
HDAC3-202ENST00000459727 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-202ENST00000459727 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
HDAC3-202ENST00000459727 SEC24BO95487 1268 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 HMOX1P09601 288 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 MLECQ14165 292 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
HDAC3-202ENST00000459727 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
HDAC3-202ENST00000459727 ROBO2Q9HCK4 1378 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 PTPRUQ92729 1446 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
HDAC3-202ENST00000459727 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
HDAC3-202ENST00000459727 INTS3Q68E01 1043 aaKnown RBP11.04□□□□□ -0.64
HDAC3-202ENST00000459727 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
HDAC3-202ENST00000459727 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
HDAC3-202ENST00000459727 FLT4P35916 1363 aa11.03□□□□□ -0.64
HDAC3-202ENST00000459727 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-202ENST00000459727 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
HDAC3-202ENST00000459727 RPAP2Q8IXW5 612 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-202ENST00000459727 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
HDAC3-202ENST00000459727 SSH2Q76I76 1423 aa11.02□□□□□ -0.64
HDAC3-202ENST00000459727 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.64
HDAC3-202ENST00000459727 CHL1O00533 1208 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 HMMRO75330 724 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 CDC45O75419 566 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 ACEP12821 1306 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 PRR36Q9H6K5 1346 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 RTL1A6NKG5 1358 aa11.02□□□□□ -0.65
HDAC3-202ENST00000459727 EIF4A2Q14240 407 aaKnown RBP11.01□□□□□ -0.65
HDAC3-202ENST00000459727 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
HDAC3-202ENST00000459727 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
HDAC3-202ENST00000459727 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
HDAC3-202ENST00000459727 KDRP35968 1356 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms