RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PPM1GO15355 546 aaPredicted RBP22.27■■□□□ 1.16
LINC00963-208ENST00000454968 AMPHP49418 695 aa22.27■■□□□ 1.16
LINC00963-208ENST00000454968 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
LINC00963-208ENST00000454968 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
LINC00963-208ENST00000454968 KIAA0232Q92628 1395 aa22.26■■□□□ 1.15
LINC00963-208ENST00000454968 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
LINC00963-208ENST00000454968 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
LINC00963-208ENST00000454968 NUDCQ9Y266 331 aa22.25■■□□□ 1.15
LINC00963-208ENST00000454968 JCADQ9P266 1359 aa22.25■■□□□ 1.15
LINC00963-208ENST00000454968 NCAPD2Q15021 1401 aa22.25■■□□□ 1.15
LINC00963-208ENST00000454968 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
LINC00963-208ENST00000454968 COL14A1Q05707 1796 aaKnown RBP22.23■■□□□ 1.15
LINC00963-208ENST00000454968 KDRP35968 1356 aa22.23■■□□□ 1.15
LINC00963-208ENST00000454968 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
LINC00963-208ENST00000454968 AXIN2Q9Y2T1 843 aa22.22■■□□□ 1.15
LINC00963-208ENST00000454968 IGSF1Q8N6C5 1336 aa22.21■■□□□ 1.15
LINC00963-208ENST00000454968 ERBB3P21860 1342 aa22.2■■□□□ 1.14
LINC00963-208ENST00000454968 FCHSD2O94868 740 aa22.18■■□□□ 1.14
LINC00963-208ENST00000454968 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
LINC00963-208ENST00000454968 HSPA1LP34931 641 aa22.18■■□□□ 1.14
LINC00963-208ENST00000454968 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
LINC00963-208ENST00000454968 PLEKHF1Q96S99 279 aa22.18■■□□□ 1.14
LINC00963-208ENST00000454968 RSPH6AQ9H0K4 717 aa22.17■■□□□ 1.14
LINC00963-208ENST00000454968 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
LINC00963-208ENST00000454968 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
LINC00963-208ENST00000454968 EYA1Q99502 592 aa22.16■■□□□ 1.14
LINC00963-208ENST00000454968 PRDM11Q9NQV5 511 aa22.16■■□□□ 1.14
LINC00963-208ENST00000454968 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
LINC00963-208ENST00000454968 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
LINC00963-208ENST00000454968 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
LINC00963-208ENST00000454968 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
LINC00963-208ENST00000454968 PLEKHG5O94827 1062 aa22.15■■□□□ 1.14
LINC00963-208ENST00000454968 CHRNA2Q15822 529 aa22.14■■□□□ 1.14
LINC00963-208ENST00000454968 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.14
LINC00963-208ENST00000454968 NRAPQ86VF7 1730 aa22.14■■□□□ 1.13
LINC00963-208ENST00000454968 HAP1P54257 671 aaPredicted RBP22.14■■□□□ 1.13
LINC00963-208ENST00000454968 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
LINC00963-208ENST00000454968 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
LINC00963-208ENST00000454968 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
LINC00963-208ENST00000454968 PNNQ9H307 717 aaKnown RBP22.12■■□□□ 1.13
LINC00963-208ENST00000454968 LRP6O75581 1613 aa22.11■■□□□ 1.13
LINC00963-208ENST00000454968 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
LINC00963-208ENST00000454968 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
LINC00963-208ENST00000454968 SLIT2O94813 1529 aa22.11■■□□□ 1.13
LINC00963-208ENST00000454968 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
LINC00963-208ENST00000454968 ZBED9Q6R2W3 1325 aa22.09■■□□□ 1.13
LINC00963-208ENST00000454968 WDR17Q8IZU2 1322 aa22.09■■□□□ 1.13
LINC00963-208ENST00000454968 ZBTB7CA1YPR0 619 aa22.09■■□□□ 1.13
LINC00963-208ENST00000454968 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.132e-9■■■□□ 15
LINC00963-208ENST00000454968 SULT6B1Q6IMI4 303 aa22.09■■□□□ 1.13
LINC00963-208ENST00000454968 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
LINC00963-208ENST00000454968 HMOX1P09601 288 aa22.08■■□□□ 1.13
LINC00963-208ENST00000454968 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
LINC00963-208ENST00000454968 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
LINC00963-208ENST00000454968 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
LINC00963-208ENST00000454968 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
LINC00963-208ENST00000454968 DLG5Q8TDM6 1919 aa22.07■■□□□ 1.12
LINC00963-208ENST00000454968 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
LINC00963-208ENST00000454968 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
LINC00963-208ENST00000454968 APAF1O14727 1248 aa22.06■■□□□ 1.12
LINC00963-208ENST00000454968 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
LINC00963-208ENST00000454968 ZNF521Q96K83 1311 aa22.05■■□□□ 1.12
LINC00963-208ENST00000454968 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
LINC00963-208ENST00000454968 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
LINC00963-208ENST00000454968 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
LINC00963-208ENST00000454968 CRB1P82279 1406 aa22.03■■□□□ 1.12
LINC00963-208ENST00000454968 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
LINC00963-208ENST00000454968 PKD1L3Q7Z443 1732 aa22.02■■□□□ 1.12
LINC00963-208ENST00000454968 ADAMTS2O95450 1211 aa22.02■■□□□ 1.12
LINC00963-208ENST00000454968 CARD10Q9BWT7 1032 aa22.02■■□□□ 1.12
LINC00963-208ENST00000454968 WNK3Q9BYP7 1800 aa22.02■■□□□ 1.11
LINC00963-208ENST00000454968 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 TMPOP42166 694 aaKnown RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
LINC00963-208ENST00000454968 MAPK8IP3Q9UPT6 1336 aa22.01■■□□□ 1.11
LINC00963-208ENST00000454968 BCL9LQ86UU0 1499 aa22■■□□□ 1.11
LINC00963-208ENST00000454968 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
LINC00963-208ENST00000454968 NFE2L2Q16236 605 aa21.98■■□□□ 1.11
LINC00963-208ENST00000454968 LARP1Q6PKG0 1096 aaKnown RBP21.98■■□□□ 1.11
LINC00963-208ENST00000454968 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
LINC00963-208ENST00000454968 MEGF6O75095 1541 aa21.98■■□□□ 1.11
LINC00963-208ENST00000454968 CSB-PGBD3P0DP91 1061 aa21.97■■□□□ 1.11
LINC00963-208ENST00000454968 NEFMP07197 916 aa21.97■■□□□ 1.11
LINC00963-208ENST00000454968 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
LINC00963-208ENST00000454968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
LINC00963-208ENST00000454968 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
LINC00963-208ENST00000454968 OVOS2A0A0G2JMS6 1433 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 EVA1CP58658 441 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 TOM1L2Q6ZVM7 507 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 WWC1Q8IX03 1113 aa21.95■■□□□ 1.1
LINC00963-208ENST00000454968 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
LINC00963-208ENST00000454968 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
LINC00963-208ENST00000454968 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
LINC00963-208ENST00000454968 PDE3BQ13370 1112 aa21.93■■□□□ 1.1
LINC00963-208ENST00000454968 AMOTQ4VCS5 1084 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms