RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 PYCARDQ9ULZ3 195 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 SYAP1Q96A49 352 aaPredicted RBP20.22■□□□□ 0.83
CTNNB1-210ENST00000453024 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
CTNNB1-210ENST00000453024 ST18O60284 1047 aa20.22■□□□□ 0.83
CTNNB1-210ENST00000453024 FAM184AQ8NB25 1140 aa20.21■□□□□ 0.83
CTNNB1-210ENST00000453024 KCNF1Q9H3M0 494 aa20.2■□□□□ 0.82
CTNNB1-210ENST00000453024 GADD45BO75293 160 aaPredicted RBP20.2■□□□□ 0.82
CTNNB1-210ENST00000453024 MTHFSP49914 203 aa20.2■□□□□ 0.82
CTNNB1-210ENST00000453024 DDX41Q9UJV9 622 aaKnown RBP20.19■□□□□ 0.82
CTNNB1-210ENST00000453024 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
CTNNB1-210ENST00000453024 CCDC66A2RUB6 948 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 PHF14O94880 888 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 TERF2Q15554 542 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 UNC13BO14795 1591 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 SLC20A2Q08357 652 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 ARHGEF5Q12774 1597 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 TIGD1Q96MW7 591 aa20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 DNAJC2Q99543 621 aaKnown RBP20.18■□□□□ 0.82
CTNNB1-210ENST00000453024 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 BRD1O95696 1058 aa20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 SIRT2Q8IXJ6 389 aa20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 ATP10AO60312 1499 aa20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
CTNNB1-210ENST00000453024 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 CAPN2P17655 700 aa20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 RSPH4AQ5TD94 716 aa20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 MORC2Q9Y6X9 1032 aaPredicted RBP20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 ANKRD36BQ8N2N9 1353 aa20.16■□□□□ 0.82
CTNNB1-210ENST00000453024 ZNF518AQ6AHZ1 1483 aa20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 PLCB2Q00722 1185 aa20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 NAA30Q147X3 362 aaPredicted RBP20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 PLEKHM2Q8IWE5 1019 aa20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 KDM4AO75164 1064 aa20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
CTNNB1-210ENST00000453024 PLEKHD1A6NEE1 506 aa20.14■□□□□ 0.82
CTNNB1-210ENST00000453024 TTC37Q6PGP7 1564 aa20.14■□□□□ 0.82
CTNNB1-210ENST00000453024 CLTCL1P53675 1640 aa20.14■□□□□ 0.81
CTNNB1-210ENST00000453024 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
CTNNB1-210ENST00000453024 IQGAP3Q86VI3 1631 aa20.13■□□□□ 0.81
CTNNB1-210ENST00000453024 AP5Z1O43299 807 aa20.13■□□□□ 0.81
CTNNB1-210ENST00000453024 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
CTNNB1-210ENST00000453024 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
CTNNB1-210ENST00000453024 ERICH4A6NGS2 130 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 KIF18AQ8NI77 898 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 TULP2O00295 520 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 SYCP1Q15431 976 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 TTC22Q5TAA0 569 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 INTS3Q68E01 1043 aaKnown RBP20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 TMX3Q96JJ7 454 aa20.12■□□□□ 0.81
CTNNB1-210ENST00000453024 SPC24Q8NBT2 197 aa20.11■□□□□ 0.81
CTNNB1-210ENST00000453024 ADGRB2O60241 1585 aa20.11■□□□□ 0.81
CTNNB1-210ENST00000453024 MED14O60244 1454 aa20.11■□□□□ 0.81
CTNNB1-210ENST00000453024 REREQ9P2R6 1566 aa20.11■□□□□ 0.81
CTNNB1-210ENST00000453024 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
CTNNB1-210ENST00000453024 TPRNQ4KMQ1 711 aa20.1■□□□□ 0.81
CTNNB1-210ENST00000453024 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
CTNNB1-210ENST00000453024 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
CTNNB1-210ENST00000453024 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
CTNNB1-210ENST00000453024 CERS3Q8IU89 383 aa20.09■□□□□ 0.81
CTNNB1-210ENST00000453024 CCDC183Q5T5S1 534 aa20.08■□□□□ 0.81
CTNNB1-210ENST00000453024 KRT222Q8N1A0 295 aa20.08■□□□□ 0.81
CTNNB1-210ENST00000453024 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
CTNNB1-210ENST00000453024 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
CTNNB1-210ENST00000453024 VGFO15240 615 aaPredicted RBP20.08■□□□□ 0.8
CTNNB1-210ENST00000453024 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.8
CTNNB1-210ENST00000453024 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.8
CTNNB1-210ENST00000453024 CALCOCO1Q9P1Z2 691 aa20.08■□□□□ 0.8
CTNNB1-210ENST00000453024 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
CTNNB1-210ENST00000453024 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
CTNNB1-210ENST00000453024 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
CTNNB1-210ENST00000453024 NEK4P51957 841 aa20.07■□□□□ 0.8
CTNNB1-210ENST00000453024 SPHKAPQ2M3C7 1700 aa20.06■□□□□ 0.8
CTNNB1-210ENST00000453024 SMTNL1A8MU46 457 aa20.06■□□□□ 0.8
CTNNB1-210ENST00000453024 TRERF1Q96PN7 1200 aa20.06■□□□□ 0.8
CTNNB1-210ENST00000453024 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
CTNNB1-210ENST00000453024 TPM3P06753 285 aa20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 SDSP20132 328 aa20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 IRX3P78415 501 aaPredicted RBP20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 OTUD7AQ8TE49 926 aaPredicted RBP20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 C16orf45Q96MC5 204 aaPredicted RBP20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 SLC12A5Q9H2X9 1139 aa20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 MX1P20591 662 aa20.05■□□□□ 0.8
CTNNB1-210ENST00000453024 PLEKHF1Q96S99 279 aa20.04■□□□□ 0.8
CTNNB1-210ENST00000453024 CFAP70Q5T0N1 1121 aa20.04■□□□□ 0.8
CTNNB1-210ENST00000453024 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
CTNNB1-210ENST00000453024 PTGS1P23219 599 aa20.03■□□□□ 0.8
CTNNB1-210ENST00000453024 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
CTNNB1-210ENST00000453024 CUL4AQ13619 759 aa20.03■□□□□ 0.8
CTNNB1-210ENST00000453024 ST7Q9NRC1 585 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms