RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 EVA1CP58658 441 aa17.89■□□□□ 0.45
ERGIC3-209ENST00000447986 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
ERGIC3-209ENST00000447986 RXRBP28702 533 aa17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 MYCNP04198 464 aaPredicted RBP17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 VPS72Q15906 364 aa17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
ERGIC3-209ENST00000447986 ATRNO75882 1429 aa17.86■□□□□ 0.45
ERGIC3-209ENST00000447986 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
ERGIC3-209ENST00000447986 ABCC6O95255 1503 aa17.86■□□□□ 0.45
ERGIC3-209ENST00000447986 GJD4Q96KN9 370 aaPredicted RBP17.85■□□□□ 0.45
ERGIC3-209ENST00000447986 AMPHP49418 695 aa17.84■□□□□ 0.45
ERGIC3-209ENST00000447986 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
ERGIC3-209ENST00000447986 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
ERGIC3-209ENST00000447986 CAMTA1Q9Y6Y1 1673 aa17.84■□□□□ 0.45
ERGIC3-209ENST00000447986 MAP3K19Q56UN5 1328 aa17.83■□□□□ 0.45
ERGIC3-209ENST00000447986 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
ERGIC3-209ENST00000447986 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 LTN1O94822 1766 aa17.82■□□□□ 0.44
ERGIC3-209ENST00000447986 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 FBLN1P23142 703 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 IP6K1Q92551 441 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 RTL1A6NKG5 1358 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 KIF24Q5T7B8 1368 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
ERGIC3-209ENST00000447986 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
ERGIC3-209ENST00000447986 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
ERGIC3-209ENST00000447986 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
ERGIC3-209ENST00000447986 TOM1L2Q6ZVM7 507 aa17.8■□□□□ 0.44
ERGIC3-209ENST00000447986 COL18A1P39060 1754 aa17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 WDR17Q8IZU2 1322 aa17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 HOXC9P31274 260 aa17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
ERGIC3-209ENST00000447986 CRB1P82279 1406 aa17.78■□□□□ 0.44
ERGIC3-209ENST00000447986 FLT4P35916 1363 aa17.78■□□□□ 0.44
ERGIC3-209ENST00000447986 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
ERGIC3-209ENST00000447986 ATXN8OSP0DMR3 200 aa17.78■□□□□ 0.44
ERGIC3-209ENST00000447986 ERBB3P21860 1342 aa17.77■□□□□ 0.44
ERGIC3-209ENST00000447986 SPATA31A1Q5TZJ5 1347 aa17.77■□□□□ 0.44
ERGIC3-209ENST00000447986 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
ERGIC3-209ENST00000447986 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
ERGIC3-209ENST00000447986 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 SMG6Q86US8 1419 aaKnown RBP17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 A0A0G2JS52 829 aa17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 MYT1Q01538 1121 aa17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
ERGIC3-209ENST00000447986 GLI3P10071 1580 aa17.75■□□□□ 0.43
ERGIC3-209ENST00000447986 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
ERGIC3-209ENST00000447986 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
ERGIC3-209ENST00000447986 INSRP06213 1382 aa17.75■□□□□ 0.43
ERGIC3-209ENST00000447986 FAM98CQ17RN3 349 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-209ENST00000447986 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
ERGIC3-209ENST00000447986 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
ERGIC3-209ENST00000447986 CARD10Q9BWT7 1032 aa17.73■□□□□ 0.43
ERGIC3-209ENST00000447986 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
ERGIC3-209ENST00000447986 RGS12O14924 1447 aa17.73■□□□□ 0.43
ERGIC3-209ENST00000447986 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
ERGIC3-209ENST00000447986 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
ERGIC3-209ENST00000447986 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
ERGIC3-209ENST00000447986 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
ERGIC3-209ENST00000447986 MAP2P11137 1827 aaKnown RBP17.71■□□□□ 0.42
ERGIC3-209ENST00000447986 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-209ENST00000447986 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
ERGIC3-209ENST00000447986 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-209ENST00000447986 MTHFSP49914 203 aa17.68■□□□□ 0.42
ERGIC3-209ENST00000447986 IL2RBP14784 551 aa17.65■□□□□ 0.42
ERGIC3-209ENST00000447986 RALBP1Q15311 655 aa17.65■□□□□ 0.42
ERGIC3-209ENST00000447986 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
ERGIC3-209ENST00000447986 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 DDB1Q16531 1140 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 PARD3Q8TEW0 1356 aa17.64■□□□□ 0.41
ERGIC3-209ENST00000447986 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
ERGIC3-209ENST00000447986 EXOC5O00471 708 aa17.61■□□□□ 0.41
ERGIC3-209ENST00000447986 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
ERGIC3-209ENST00000447986 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
ERGIC3-209ENST00000447986 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
ERGIC3-209ENST00000447986 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
ERGIC3-209ENST00000447986 DIAPH1O60610 1272 aaKnown RBP17.6■□□□□ 0.41
ERGIC3-209ENST00000447986 EYA1Q99502 592 aa17.6■□□□□ 0.41
ERGIC3-209ENST00000447986 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
ERGIC3-209ENST00000447986 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.41
ERGIC3-209ENST00000447986 IGSF1Q8N6C5 1336 aa17.58■□□□□ 0.4
ERGIC3-209ENST00000447986 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms