RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LMO7Q8WWI1 1683 aa24.29■■□□□ 1.48
TRAPPC4-203ENST00000447216 FAM83GA6ND36 823 aa24.28■■□□□ 1.48
TRAPPC4-203ENST00000447216 HOXC9P31274 260 aa24.27■■□□□ 1.48
TRAPPC4-203ENST00000447216 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC4-203ENST00000447216 IP6K1Q92551 441 aa24.26■■□□□ 1.47
TRAPPC4-203ENST00000447216 RTL1A6NKG5 1358 aa24.26■■□□□ 1.47
TRAPPC4-203ENST00000447216 FLT4P35916 1363 aa24.26■■□□□ 1.47
TRAPPC4-203ENST00000447216 RGPD2P0DJD1 1756 aa24.25■■□□□ 1.47
TRAPPC4-203ENST00000447216 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
TRAPPC4-203ENST00000447216 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
TRAPPC4-203ENST00000447216 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
TRAPPC4-203ENST00000447216 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
TRAPPC4-203ENST00000447216 MEX3CQ5U5Q3 659 aaKnown RBP24.24■■□□□ 1.47
TRAPPC4-203ENST00000447216 ABCC6O95255 1503 aa24.24■■□□□ 1.47
TRAPPC4-203ENST00000447216 C8orf37Q96NL8 207 aa24.23■■□□□ 1.47
TRAPPC4-203ENST00000447216 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
TRAPPC4-203ENST00000447216 COL3A1P02461 1466 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC4-203ENST00000447216 LTV1Q96GA3 475 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC4-203ENST00000447216 NRAPQ86VF7 1730 aa24.21■■□□□ 1.47
TRAPPC4-203ENST00000447216 NWD2Q9ULI1 1742 aa24.21■■□□□ 1.47
TRAPPC4-203ENST00000447216 INSRP06213 1382 aa24.2■■□□□ 1.46
TRAPPC4-203ENST00000447216 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
TRAPPC4-203ENST00000447216 BLMP54132 1417 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-203ENST00000447216 NGLY1Q96IV0 654 aa24.19■■□□□ 1.46
TRAPPC4-203ENST00000447216 BTG4Q9NY30 223 aa24.19■■□□□ 1.46
TRAPPC4-203ENST00000447216 SLIT2O94813 1529 aa24.17■■□□□ 1.46
TRAPPC4-203ENST00000447216 EIF4A2Q14240 407 aaKnown RBP24.17■■□□□ 1.46
TRAPPC4-203ENST00000447216 ANKRD24Q8TF21 1146 aa24.17■■□□□ 1.46
TRAPPC4-203ENST00000447216 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
TRAPPC4-203ENST00000447216 COL5A2P05997 1499 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC4-203ENST00000447216 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
TRAPPC4-203ENST00000447216 DIAPH1O60610 1272 aaKnown RBP24.15■■□□□ 1.46
TRAPPC4-203ENST00000447216 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
TRAPPC4-203ENST00000447216 ERBB3P21860 1342 aa24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 CCER2I3L3R5 266 aa24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 IL13P35225 146 aa24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 EVA1CP58658 441 aa24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.13■■□□□ 1.45
TRAPPC4-203ENST00000447216 AFF2P51816 1311 aa24.12■■□□□ 1.45
TRAPPC4-203ENST00000447216 CSB-PGBD3P0DP91 1061 aa24.12■■□□□ 1.45
TRAPPC4-203ENST00000447216 FNBP4Q8N3X1 1017 aaPredicted RBP24.11■■□□□ 1.45
TRAPPC4-203ENST00000447216 BCL9LQ86UU0 1499 aa24.11■■□□□ 1.45
TRAPPC4-203ENST00000447216 U2SURPO15042 1029 aaKnown RBP24.1■■□□□ 1.45
TRAPPC4-203ENST00000447216 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
TRAPPC4-203ENST00000447216 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
TRAPPC4-203ENST00000447216 USP21Q9UK80 565 aa24.09■■□□□ 1.45
TRAPPC4-203ENST00000447216 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
TRAPPC4-203ENST00000447216 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
TRAPPC4-203ENST00000447216 EYA1Q99502 592 aa24.08■■□□□ 1.45
TRAPPC4-203ENST00000447216 NLRP2Q9NX02 1062 aa24.08■■□□□ 1.45
TRAPPC4-203ENST00000447216 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
TRAPPC4-203ENST00000447216 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
TRAPPC4-203ENST00000447216 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
TRAPPC4-203ENST00000447216 TOM1L2Q6ZVM7 507 aa24.06■■□□□ 1.44
TRAPPC4-203ENST00000447216 CRB1P82279 1406 aa24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 U2AF1L5P0DN76 240 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 U2AF1Q01081 240 aaKnown RBP eCLIP24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 PNISRQ8TF01 805 aaKnown RBP24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
TRAPPC4-203ENST00000447216 HMOX1P09601 288 aa24.03■■□□□ 1.44
TRAPPC4-203ENST00000447216 AEBP1Q8IUX7 1158 aa24.03■■□□□ 1.44
TRAPPC4-203ENST00000447216 CCDC9Q9Y3X0 531 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-203ENST00000447216 WNK3Q9BYP7 1800 aa24.03■■□□□ 1.44
TRAPPC4-203ENST00000447216 CARD10Q9BWT7 1032 aa24.02■■□□□ 1.44
TRAPPC4-203ENST00000447216 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
TRAPPC4-203ENST00000447216 SULT6B1Q6IMI4 303 aa24.01■■□□□ 1.43
TRAPPC4-203ENST00000447216 FAM9BQ8IZU0 186 aa24.01■■□□□ 1.43
TRAPPC4-203ENST00000447216 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
TRAPPC4-203ENST00000447216 VPS72Q15906 364 aa24■■□□□ 1.43
TRAPPC4-203ENST00000447216 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
TRAPPC4-203ENST00000447216 ATRNO75882 1429 aa24■■□□□ 1.43
TRAPPC4-203ENST00000447216 SPATA31A5Q5VU36 1347 aa23.99■■□□□ 1.43
TRAPPC4-203ENST00000447216 SPATA31A7Q8IWB4 1347 aa23.99■■□□□ 1.43
TRAPPC4-203ENST00000447216 SPATA31A1Q5TZJ5 1347 aa23.98■■□□□ 1.43
TRAPPC4-203ENST00000447216 GLI3P10071 1580 aa23.97■■□□□ 1.43
TRAPPC4-203ENST00000447216 QTRT2Q9H974 415 aaKnown RBP23.97■■□□□ 1.43
TRAPPC4-203ENST00000447216 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-203ENST00000447216 RSPH6AQ9H0K4 717 aa23.96■■□□□ 1.43
TRAPPC4-203ENST00000447216 KDRP35968 1356 aa23.95■■□□□ 1.42
TRAPPC4-203ENST00000447216 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-203ENST00000447216 PARP4Q9UKK3 1724 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-203ENST00000447216 PRKAR2BP31323 418 aa23.94■■□□□ 1.42
TRAPPC4-203ENST00000447216 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
TRAPPC4-203ENST00000447216 TCP11L2Q8N4U5 519 aa23.94■■□□□ 1.42
TRAPPC4-203ENST00000447216 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC4-203ENST00000447216 MEGF6O75095 1541 aa23.94■■□□□ 1.42
TRAPPC4-203ENST00000447216 FCHSD2O94868 740 aa23.92■■□□□ 1.42
TRAPPC4-203ENST00000447216 GJD4Q96KN9 370 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-203ENST00000447216 RAPGEF4Q8WZA2 1011 aa23.91■■□□□ 1.42
TRAPPC4-203ENST00000447216 FAM98CQ17RN3 349 aaKnown RBP23.9■■□□□ 1.42
TRAPPC4-203ENST00000447216 DISP2A7MBM2 1401 aa23.9■■□□□ 1.42
TRAPPC4-203ENST00000447216 DLG5Q8TDM6 1919 aa23.89■■□□□ 1.42
TRAPPC4-203ENST00000447216 IL2RBP14784 551 aa23.89■■□□□ 1.41
TRAPPC4-203ENST00000447216 TATP17735 454 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC4-203ENST00000447216 THRAP3Q9Y2W1 955 aaKnown RBP23.89■■□□□ 1.41
TRAPPC4-203ENST00000447216 PKD1L3Q7Z443 1732 aa23.89■■□□□ 1.41
TRAPPC4-203ENST00000447216 SHANK3Q9BYB0 1731 aa23.88■■□□□ 1.41
TRAPPC4-203ENST00000447216 POTEAQ6S8J7 498 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms