RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GLI3P10071 1580 aa14.87□□□□□ -0.03
HDAC6-211ENST00000443563 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
HDAC6-211ENST00000443563 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
HDAC6-211ENST00000443563 RGPD5Q99666 1765 aa14.87□□□□□ -0.03
HDAC6-211ENST00000443563 NSD2O96028 1365 aa14.86□□□□□ -0.03
HDAC6-211ENST00000443563 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-211ENST00000443563 SPATA31A5Q5VU36 1347 aa14.84□□□□□ -0.03
HDAC6-211ENST00000443563 SPATA31A7Q8IWB4 1347 aa14.84□□□□□ -0.03
HDAC6-211ENST00000443563 RGS12O14924 1447 aa14.83□□□□□ -0.03
HDAC6-211ENST00000443563 BLMP54132 1417 aaPredicted RBP14.83□□□□□ -0.03
HDAC6-211ENST00000443563 RTL1A6NKG5 1358 aa14.83□□□□□ -0.04
HDAC6-211ENST00000443563 KIF24Q5T7B8 1368 aa14.83□□□□□ -0.04
HDAC6-211ENST00000443563 CRB1P82279 1406 aa14.83□□□□□ -0.04
HDAC6-211ENST00000443563 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
HDAC6-211ENST00000443563 AMPHP49418 695 aa14.82□□□□□ -0.04
HDAC6-211ENST00000443563 IP6K1Q92551 441 aa14.82□□□□□ -0.04
HDAC6-211ENST00000443563 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
HDAC6-211ENST00000443563 THRAP3Q9Y2W1 955 aaKnown RBP14.82□□□□□ -0.04
HDAC6-211ENST00000443563 SPATA31A1Q5TZJ5 1347 aa14.82□□□□□ -0.04
HDAC6-211ENST00000443563 WDR17Q8IZU2 1322 aa14.82□□□□□ -0.04
HDAC6-211ENST00000443563 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
HDAC6-211ENST00000443563 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-211ENST00000443563 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
HDAC6-211ENST00000443563 LARP1Q6PKG0 1096 aaKnown RBP14.81□□□□□ -0.04
HDAC6-211ENST00000443563 MAP3K19Q56UN5 1328 aa14.81□□□□□ -0.04
HDAC6-211ENST00000443563 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
HDAC6-211ENST00000443563 A0A0G2JS52 829 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 SOCS7O14512 581 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 PER1O15534 1290 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-211ENST00000443563 HOXC9P31274 260 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 MYT1Q01538 1121 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
HDAC6-211ENST00000443563 BARGINQ6ZT62 677 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 MORC1Q86VD1 984 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 TCP11L2Q8N4U5 519 aa14.79□□□□□ -0.04
HDAC6-211ENST00000443563 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 THSD7AQ9UPZ6 1657 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
HDAC6-211ENST00000443563 FLT4P35916 1363 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 ERBB3P21860 1342 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 RRS1Q15050 365 aaKnown RBP14.78□□□□□ -0.04
HDAC6-211ENST00000443563 AMER1Q5JTC6 1135 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-211ENST00000443563 SEPT12Q8IYM1 358 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 ANKRD24Q8TF21 1146 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 CARD10Q9BWT7 1032 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 WNK3Q9BYP7 1800 aa14.78□□□□□ -0.04
HDAC6-211ENST00000443563 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.04
HDAC6-211ENST00000443563 EP400Q96L91 3159 aa14.77□□□□□ -0.05
HDAC6-211ENST00000443563 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
HDAC6-211ENST00000443563 FBLN1P23142 703 aa14.76□□□□□ -0.05
HDAC6-211ENST00000443563 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-211ENST00000443563 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
HDAC6-211ENST00000443563 INSRP06213 1382 aa14.75□□□□□ -0.05
HDAC6-211ENST00000443563 NLRP2Q9NX02 1062 aa14.75□□□□□ -0.05
HDAC6-211ENST00000443563 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-211ENST00000443563 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-211ENST00000443563 KRT27Q7Z3Y8 459 aa14.74□□□□□ -0.05
HDAC6-211ENST00000443563 LTV1Q96GA3 475 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-211ENST00000443563 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
HDAC6-211ENST00000443563 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
HDAC6-211ENST00000443563 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
HDAC6-211ENST00000443563 RGPD2P0DJD1 1756 aa14.72□□□□□ -0.05
HDAC6-211ENST00000443563 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
HDAC6-211ENST00000443563 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.05
HDAC6-211ENST00000443563 LRRC37A3O60309 1634 aa14.7□□□□□ -0.06
HDAC6-211ENST00000443563 DISP2A7MBM2 1401 aa14.69□□□□□ -0.06
HDAC6-211ENST00000443563 IL2RBP14784 551 aa14.69□□□□□ -0.06
HDAC6-211ENST00000443563 DDB1Q16531 1140 aa14.69□□□□□ -0.06
HDAC6-211ENST00000443563 EXOC5O00471 708 aa14.67□□□□□ -0.06
HDAC6-211ENST00000443563 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
HDAC6-211ENST00000443563 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
HDAC6-211ENST00000443563 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-211ENST00000443563 NBPF6Q5VWK0 638 aa14.66□□□□□ -0.06
HDAC6-211ENST00000443563 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.06
HDAC6-211ENST00000443563 NBPF4Q96M43 638 aa14.66□□□□□ -0.06
HDAC6-211ENST00000443563 TNS2Q63HR2 1409 aa14.66□□□□□ -0.06
HDAC6-211ENST00000443563 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-211ENST00000443563 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
HDAC6-211ENST00000443563 RAPGEF4Q8WZA2 1011 aa14.65□□□□□ -0.06
HDAC6-211ENST00000443563 RGPD1P0DJD0 1748 aa14.64□□□□□ -0.07
HDAC6-211ENST00000443563 MTHFSP49914 203 aa14.64□□□□□ -0.07
HDAC6-211ENST00000443563 EIF4A2Q14240 407 aaKnown RBP14.64□□□□□ -0.07
HDAC6-211ENST00000443563 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
HDAC6-211ENST00000443563 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-211ENST00000443563 SF3B2Q13435 895 aaKnown RBP14.63□□□□□ -0.07
HDAC6-211ENST00000443563 NCAPD2Q15021 1401 aa14.63□□□□□ -0.07
HDAC6-211ENST00000443563 USHBP1Q8N6Y0 703 aa14.62□□□□□ -0.07
HDAC6-211ENST00000443563 EYA1Q99502 592 aa14.62□□□□□ -0.07
HDAC6-211ENST00000443563 PLEKHG2Q9H7P9 1386 aa14.61□□□□□ -0.07
HDAC6-211ENST00000443563 CFAP53Q96M91 514 aa14.61□□□□□ -0.07
HDAC6-211ENST00000443563 BCL9O00512 1426 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 RALBP1Q15311 655 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 FAM182BQ5T319 152 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
HDAC6-211ENST00000443563 MEGF6O75095 1541 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 IGSF1Q8N6C5 1336 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 PARD3Q8TEW0 1356 aa14.6□□□□□ -0.07
HDAC6-211ENST00000443563 PKD1L3Q7Z443 1732 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms