RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 NCOA4Q13772 614 aa7.84□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 PACS2Q86VP3 889 aa7.84□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 TUT1Q9H6E5 874 aaKnown RBP7.84□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 EGFL7Q9UHF1 273 aa7.84□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 COL9A1P20849 921 aa7.83□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 GLYCTKQ8IVS8 523 aa7.83□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 FAM174AQ8TBP5 190 aa7.83□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ZSCAN29Q8IWY8 852 aaPredicted RBP7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ASB16Q96NS5 453 aa7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 MYH16Q9H6N6 1097 aa7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 BICRAQ9NZM4 1560 aa7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 PTMAP06454 111 aaKnown RBP7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 NEFMP07197 916 aa7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 DPYDQ12882 1025 aa7.82□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SLFNL1Q499Z3 407 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 GIMAP6Q6P9H5 292 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 HIRIP3Q9BW71 556 aaPredicted RBP7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 BACH2Q9BYV9 841 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ZNF211Q13398 564 aaPredicted RBP7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 FAM50AQ14320 339 aaKnown RBP7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 DPH6Q7L8W6 267 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SYMPKQ92797 1274 aaKnown RBP7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ANO2Q9NQ90 1003 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SMAPO00193 183 aa7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 MARCH6O60337 910 aa7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ICMTO60725 284 aa7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 CLCN6P51797 869 aa7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 EAPPQ56P03 285 aaPredicted RBP7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 OGFOD1Q8N543 542 aa7.8□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 COL19A1Q14993 1142 aa7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 COLQQ9Y215 455 aaPredicted RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SALL2Q9Y467 1007 aaPredicted RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 PRMT3O60678 531 aa7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SLC10A3P09131 477 aa7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 RNF135Q8IUD6 432 aa7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 LAS1LQ9Y4W2 734 aaKnown RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 EIF4G1Q04637 1599 aaKnown RBP7.79□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 PPP1R3GB7ZBB8 358 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 CCDC88BA6NC98 1476 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 SMARCA2P51531 1590 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 NUDT7P0C024 238 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 FUT2Q10981 343 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 OS9Q13438 667 aaPredicted RBP7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 FKBPLQ9UIM3 349 aa7.78□□□□□ -1.16
ALMS1-IT1-201ENST00000441587 C21orf2O43822 256 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 EML3Q32P44 896 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TAS1R3Q7RTX0 852 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PIK3R5Q8WYR1 880 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TANGO6Q9C0B7 1094 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 CEP126Q9P2H0 1117 aa7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 NAP1L2Q9ULW6 460 aaPredicted RBP7.77□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 POTEMA6NI47 508 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 HDLBPQ00341 1268 aaKnown RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 KCNH2Q12809 1159 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 DESI1Q6ICB0 168 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 FAM43BQ6ZT52 329 aaPredicted RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TRIM50Q86XT4 487 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TPD52L2O43399 206 aaKnown RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 NOP9Q86U38 636 aaKnown RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 RETREG3Q86VR2 466 aa7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 CXXC1Q9P0U4 656 aaPredicted RBP7.76□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PTPREP23469 700 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 CLDN10P78369 228 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TMTC2Q8N394 836 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 BCL2L12Q9HB09 334 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ZC3H4Q9UPT8 1303 aaKnown RBP7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PRIMPOLQ96LW4 560 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PPME1Q9Y570 386 aa7.75□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PEG3Q9GZU2 1588 aa7.74□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ATP6V1AP38606 617 aa7.74□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 MAP7D1Q3KQU3 841 aa7.74□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 HAX1O00165 279 aa7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 FKBP4Q02790 459 aaKnown RBP eCLIP7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 OCLNQ16625 522 aa7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 LYPD8Q6UX82 237 aa7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 GTF3C2Q8WUA4 911 aaPredicted RBP7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SLC4A3P48751 1232 aa7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SWT1Q5T5J6 900 aaKnown RBP7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SECISBP2LQ93073 1101 aaKnown RBP7.73□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 SEC13P55735 322 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 ARHGAP4P98171 946 aa7.72□□□□□ -1.17
ALMS1-IT1-201ENST00000441587 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms