RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
HMGB1P31-201ENST00000437242 KDM4CQ9H3R0 1056 aa8.45□□□□□ -1.06
HMGB1P31-201ENST00000437242 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P31-201ENST00000437242 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
HMGB1P31-201ENST00000437242 ZC3H4Q9UPT8 1303 aaKnown RBP8.45□□□□□ -1.06
HMGB1P31-201ENST00000437242 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
HMGB1P31-201ENST00000437242 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
HMGB1P31-201ENST00000437242 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P31-201ENST00000437242 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P31-201ENST00000437242 NR6A1Q15406 480 aa8.43□□□□□ -1.06
HMGB1P31-201ENST00000437242 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P31-201ENST00000437242 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
HMGB1P31-201ENST00000437242 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
HMGB1P31-201ENST00000437242 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P31-201ENST00000437242 KCTD15Q96SI1 283 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P31-201ENST00000437242 FAM117AQ9C073 453 aa8.42□□□□□ -1.06
HMGB1P31-201ENST00000437242 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 AP1G2O75843 785 aa8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 DHX9Q08211 1270 aaKnown RBP8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
HMGB1P31-201ENST00000437242 PTK2Q05397 1052 aa8.4□□□□□ -1.06
HMGB1P31-201ENST00000437242 CBLBQ13191 982 aa8.4□□□□□ -1.06
HMGB1P31-201ENST00000437242 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P31-201ENST00000437242 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
HMGB1P31-201ENST00000437242 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
HMGB1P31-201ENST00000437242 INTS6LQ5JSJ4 861 aaKnown RBP8.38□□□□□ -1.07
HMGB1P31-201ENST00000437242 Q6ZVU0 165 aa8.38□□□□□ -1.07
HMGB1P31-201ENST00000437242 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
HMGB1P31-201ENST00000437242 SPINT1O43278 529 aa8.37□□□□□ -1.07
HMGB1P31-201ENST00000437242 NBPF20Q3BBV1 942 aa8.37□□□□□ -1.07
HMGB1P31-201ENST00000437242 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
HMGB1P31-201ENST00000437242 USP17L8P0C7I0 530 aa8.36□□□□□ -1.07
HMGB1P31-201ENST00000437242 PTSQ03393 145 aa8.36□□□□□ -1.07
HMGB1P31-201ENST00000437242 BCANQ96GW7 911 aa8.36□□□□□ -1.07
HMGB1P31-201ENST00000437242 OCSTAMPQ9BR26 566 aa8.35□□□□□ -1.07
HMGB1P31-201ENST00000437242 RAB15P59190 212 aa8.34□□□□□ -1.07
HMGB1P31-201ENST00000437242 RELBQ01201 579 aa8.34□□□□□ -1.07
HMGB1P31-201ENST00000437242 EPS8L1Q8TE68 723 aa8.34□□□□□ -1.07
HMGB1P31-201ENST00000437242 AGBL1Q96MI9 1066 aa8.34□□□□□ -1.07
HMGB1P31-201ENST00000437242 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P31-201ENST00000437242 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
HMGB1P31-201ENST00000437242 RFC5P40937 340 aa8.32□□□□□ -1.08
HMGB1P31-201ENST00000437242 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P31-201ENST00000437242 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P31-201ENST00000437242 CTSOP43234 321 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P31-201ENST00000437242 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
HMGB1P31-201ENST00000437242 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
HMGB1P31-201ENST00000437242 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P31-201ENST00000437242 ADH1AP07327 375 aa8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 GPR161Q8N6U8 529 aaKnown RBP8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 CNTNAP3BQ96NU0 1288 aa8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 ZNF395Q9H8N7 513 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P31-201ENST00000437242 SLC35F4A4IF30 521 aa8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 KRT76Q01546 638 aa8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 RNF217Q8TC41 542 aa8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 NANOS1Q8WY41 292 aaKnown RBP8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P31-201ENST00000437242 CDC14CA4D256 554 aa8.27□□□□□ -1.09
HMGB1P31-201ENST00000437242 ITGA6P23229 1130 aa8.27□□□□□ -1.09
HMGB1P31-201ENST00000437242 ESPNB1AK53 854 aa8.26□□□□□ -1.09
HMGB1P31-201ENST00000437242 TMEM259Q4ZIN3 620 aa8.26□□□□□ -1.09
HMGB1P31-201ENST00000437242 TRIM52Q96A61 297 aa8.26□□□□□ -1.09
HMGB1P31-201ENST00000437242 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
HMGB1P31-201ENST00000437242 LILRA1O75019 489 aa8.25□□□□□ -1.09
HMGB1P31-201ENST00000437242 PTGIRP43119 386 aa8.25□□□□□ -1.09
HMGB1P31-201ENST00000437242 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
HMGB1P31-201ENST00000437242 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
HMGB1P31-201ENST00000437242 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
HMGB1P31-201ENST00000437242 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P31-201ENST00000437242 VWA5B2Q8N398 1253 aa8.24□□□□□ -1.09
HMGB1P31-201ENST00000437242 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
HMGB1P31-201ENST00000437242 PCDHB9Q9Y5E1 797 aa8.24□□□□□ -1.09
HMGB1P31-201ENST00000437242 ZBBXA8MT70 800 aa8.23□□□□□ -1.09
HMGB1P31-201ENST00000437242 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
HMGB1P31-201ENST00000437242 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
HMGB1P31-201ENST00000437242 RNFT1Q5M7Z0 435 aa8.23□□□□□ -1.09
HMGB1P31-201ENST00000437242 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
HMGB1P31-201ENST00000437242 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
HMGB1P31-201ENST00000437242 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
HMGB1P31-201ENST00000437242 RNF225M0QZC1 329 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P31-201ENST00000437242 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
HMGB1P31-201ENST00000437242 KDF1Q8NAX2 398 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P31-201ENST00000437242 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
HMGB1P31-201ENST00000437242 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
HMGB1P31-201ENST00000437242 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P31-201ENST00000437242 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P31-201ENST00000437242 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
HMGB1P31-201ENST00000437242 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
HMGB1P31-201ENST00000437242 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
HMGB1P31-201ENST00000437242 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P31-201ENST00000437242 MEN1O00255 615 aa8.17□□□□□ -1.1
HMGB1P31-201ENST00000437242 SLURP2P0DP57 97 aa8.17□□□□□ -1.1
HMGB1P31-201ENST00000437242 RHOQP17081 205 aa8.17□□□□□ -1.1
HMGB1P31-201ENST00000437242 RNF144AP50876 292 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P31-201ENST00000437242 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms