RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 ZKSCAN2Q63HK3 967 aa29.83■■■□□ 2.37
SH2D3A-202ENST00000437152 NME9Q86XW9 330 aa29.83■■■□□ 2.37
SH2D3A-202ENST00000437152 TSR2Q969E8 191 aaKnown RBP29.83■■■□□ 2.37
SH2D3A-202ENST00000437152 COG3Q96JB2 828 aa29.83■■■□□ 2.37
SH2D3A-202ENST00000437152 MSH6P52701 1360 aa29.82■■■□□ 2.36
SH2D3A-202ENST00000437152 RLBP1P12271 317 aa29.82■■■□□ 2.36
SH2D3A-202ENST00000437152 EXOSC9Q06265 439 aaKnown RBP29.82■■■□□ 2.36
SH2D3A-202ENST00000437152 NPM2Q86SE8 214 aaKnown RBP29.81■■■□□ 2.36
SH2D3A-202ENST00000437152 BCL2L13Q9BXK5 485 aa29.81■■■□□ 2.36
SH2D3A-202ENST00000437152 PPM1GO15355 546 aaPredicted RBP29.81■■■□□ 2.36
SH2D3A-202ENST00000437152 PRKAR2BP31323 418 aa29.8■■■□□ 2.36
SH2D3A-202ENST00000437152 TOPAZ1Q8N9V7 1692 aa29.8■■■□□ 2.36
SH2D3A-202ENST00000437152 ATF3P18847 181 aa29.79■■■□□ 2.36
SH2D3A-202ENST00000437152 IL13P35225 146 aa29.79■■■□□ 2.36
SH2D3A-202ENST00000437152 DCCP43146 1447 aa29.78■■■□□ 2.36
SH2D3A-202ENST00000437152 MVPQ14764 893 aaKnown RBP29.78■■■□□ 2.36
SH2D3A-202ENST00000437152 C8orf34Q49A92 452 aa29.78■■■□□ 2.36
SH2D3A-202ENST00000437152 EMILIN1Q9Y6C2 1016 aa29.78■■■□□ 2.36
SH2D3A-202ENST00000437152 FBLN1P23142 703 aa29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 CALD1Q05682 793 aaKnown RBP29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 NFE2L2Q16236 605 aa29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 DZIP1LQ8IYY4 767 aaKnown RBP29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 DDRGK1Q96HY6 314 aa29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 SMC4Q9NTJ3 1288 aa29.76■■■□□ 2.36
SH2D3A-202ENST00000437152 NRKQ7Z2Y5 1582 aa29.76■■■□□ 2.35
SH2D3A-202ENST00000437152 CADPS2Q86UW7 1296 aa29.76■■■□□ 2.35
SH2D3A-202ENST00000437152 ZNF428Q96B54 188 aa29.76■■■□□ 2.35
SH2D3A-202ENST00000437152 ANKARQ7Z5J8 1434 aa29.75■■■□□ 2.35
SH2D3A-202ENST00000437152 PLEKHG3A1L390 1219 aa29.75■■■□□ 2.35
SH2D3A-202ENST00000437152 RGS3P49796 1198 aa29.75■■■□□ 2.35
SH2D3A-202ENST00000437152 FTSJ3Q8IY81 847 aaKnown RBP29.74■■■□□ 2.35
SH2D3A-202ENST00000437152 TNNQ9UQP3 1299 aa29.74■■■□□ 2.35
SH2D3A-202ENST00000437152 SSH1Q8WYL5 1049 aa29.73■■■□□ 2.35
SH2D3A-202ENST00000437152 ALDH1L2Q3SY69 923 aa29.72■■■□□ 2.35
SH2D3A-202ENST00000437152 ZRANB1Q9UGI0 708 aa29.72■■■□□ 2.35
SH2D3A-202ENST00000437152 PCDHB15Q9Y5E8 787 aa29.72■■■□□ 2.35
SH2D3A-202ENST00000437152 VIRMAQ69YN4 1812 aaKnown RBP29.71■■■□□ 2.35
SH2D3A-202ENST00000437152 RWDD1Q9H446 243 aaPredicted RBP29.71■■■□□ 2.35
SH2D3A-202ENST00000437152 KIF16BQ96L93 1317 aa29.71■■■□□ 2.35
SH2D3A-202ENST00000437152 MST1RQ04912 1400 aa29.71■■■□□ 2.35
SH2D3A-202ENST00000437152 ATF7IPQ6VMQ6 1270 aa29.7■■■□□ 2.34
SH2D3A-202ENST00000437152 PHACTR3Q96KR7 559 aa29.69■■■□□ 2.34
SH2D3A-202ENST00000437152 C1orf167Q5SNV9 1468 aa29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 TTC21BQ7Z4L5 1316 aa29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 IPO8O15397 1037 aaKnown RBP29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 HMOX1P09601 288 aa29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 TRIM27P14373 513 aa29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 BRPF1P55201 1214 aaPredicted RBP29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 ESCO1Q5FWF5 840 aa29.68■■■□□ 2.34
SH2D3A-202ENST00000437152 LMOD3Q0VAK6 560 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 DDX19BQ9UMR2 479 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 ORAI2Q96SN7 254 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 OVOS2A0A0J9YW53 1432 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 USP6P35125 1406 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 OVOS2Q6IE36 1432 aa29.67■■■□□ 2.34
SH2D3A-202ENST00000437152 ACEP12821 1306 aa29.66■■■□□ 2.34
SH2D3A-202ENST00000437152 IFT57Q9NWB7 429 aa29.65■■■□□ 2.34
SH2D3A-202ENST00000437152 RRS1Q15050 365 aaKnown RBP29.64■■■□□ 2.34
SH2D3A-202ENST00000437152 GNAI1P63096 354 aa29.64■■■□□ 2.33
SH2D3A-202ENST00000437152 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
SH2D3A-202ENST00000437152 NOB1Q9ULX3 412 aaKnown RBP29.63■■■□□ 2.33
SH2D3A-202ENST00000437152 PHF8Q9UPP1 1060 aa29.63■■■□□ 2.33
SH2D3A-202ENST00000437152 DLG5Q8TDM6 1919 aa29.61■■■□□ 2.33
SH2D3A-202ENST00000437152 ZNF853P0CG23 659 aa29.61■■■□□ 2.33
SH2D3A-202ENST00000437152 SSH2Q76I76 1423 aa29.61■■■□□ 2.33
SH2D3A-202ENST00000437152 NGDNQ8NEJ9 315 aaKnown RBP29.61■■■□□ 2.33
SH2D3A-202ENST00000437152 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
SH2D3A-202ENST00000437152 HDAC1Q13547 482 aaPredicted RBP29.59■■■□□ 2.33
SH2D3A-202ENST00000437152 TTC21AQ8NDW8 1320 aa29.58■■■□□ 2.33
SH2D3A-202ENST00000437152 CERKQ8TCT0 537 aa29.57■■■□□ 2.32
SH2D3A-202ENST00000437152 ITPRIPQ8IWB1 547 aa29.56■■■□□ 2.32
SH2D3A-202ENST00000437152 PDZRN3Q9UPQ7 1066 aa29.56■■■□□ 2.32
SH2D3A-202ENST00000437152 ARHGAP45Q92619 1136 aa29.55■■■□□ 2.32
SH2D3A-202ENST00000437152 CFAP44Q96MT7 982 aa29.55■■■□□ 2.32
SH2D3A-202ENST00000437152 VAMP4O75379 141 aa29.55■■■□□ 2.32
SH2D3A-202ENST00000437152 KIF1AQ12756 1690 aa29.55■■■□□ 2.32
SH2D3A-202ENST00000437152 FOXO3O43524 673 aa29.54■■■□□ 2.32
SH2D3A-202ENST00000437152 LAS1LQ9Y4W2 734 aaKnown RBP29.54■■■□□ 2.32
SH2D3A-202ENST00000437152 EIF4A2Q14240 407 aaKnown RBP29.54■■■□□ 2.32
SH2D3A-202ENST00000437152 BRINP3Q76B58 766 aa29.54■■■□□ 2.32
SH2D3A-202ENST00000437152 TMEM57Q8N5G2 664 aa29.53■■■□□ 2.32
SH2D3A-202ENST00000437152 ZBTB40Q9NUA8 1239 aa29.52■■■□□ 2.32
SH2D3A-202ENST00000437152 RGPD1P0DJD0 1748 aa29.51■■■□□ 2.32
SH2D3A-202ENST00000437152 THUMPD2Q9BTF0 503 aaKnown RBP29.51■■■□□ 2.31
SH2D3A-202ENST00000437152 CHMP4BQ9H444 224 aaKnown RBP29.51■■■□□ 2.31
SH2D3A-202ENST00000437152 MBIPQ9NS73 344 aa29.51■■■□□ 2.31
SH2D3A-202ENST00000437152 PSME1Q06323 249 aa29.49■■■□□ 2.31
SH2D3A-202ENST00000437152 DDX17Q92841 729 aaKnown RBP29.49■■■□□ 2.31
SH2D3A-202ENST00000437152 PEAK1Q9H792 1746 aa29.49■■■□□ 2.31
SH2D3A-202ENST00000437152 TOM1O60784 492 aa29.49■■■□□ 2.31
SH2D3A-202ENST00000437152 MRPL50Q8N5N7 158 aaKnown RBP29.49■■■□□ 2.31
SH2D3A-202ENST00000437152 XPCQ01831 940 aaPredicted RBP29.47■■■□□ 2.31
SH2D3A-202ENST00000437152 NBR1Q14596 966 aa29.47■■■□□ 2.31
SH2D3A-202ENST00000437152 SULT6B1Q6IMI4 303 aa29.46■■■□□ 2.31
SH2D3A-202ENST00000437152 SMC5Q8IY18 1101 aa29.46■■■□□ 2.31
SH2D3A-202ENST00000437152 UBAP1LF5GYI3 381 aa29.45■■■□□ 2.31
SH2D3A-202ENST00000437152 ROBO1Q9Y6N7 1651 aa29.45■■■□□ 2.31
SH2D3A-202ENST00000437152 TWISTNBQ3B726 338 aaPredicted RBP29.45■■■□□ 2.3
SH2D3A-202ENST00000437152 DAXXQ9UER7 740 aaPredicted RBP29.45■■■□□ 2.3
SH2D3A-202ENST00000437152 TSPYL6Q8N831 410 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms