RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 FLT4P35916 1363 aa19.88■□□□□ 0.77
SKA2-202ENST00000437036 HOXC9P31274 260 aa19.88■□□□□ 0.77
SKA2-202ENST00000437036 ZNF772Q68DY9 489 aaPredicted RBP19.88■□□□□ 0.77
SKA2-202ENST00000437036 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
SKA2-202ENST00000437036 SLIT2O94813 1529 aa19.86■□□□□ 0.77
SKA2-202ENST00000437036 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
SKA2-202ENST00000437036 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
SKA2-202ENST00000437036 MTHFSP49914 203 aa19.86■□□□□ 0.77
SKA2-202ENST00000437036 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
SKA2-202ENST00000437036 STRN4Q9NRL3 753 aa19.86■□□□□ 0.77
SKA2-202ENST00000437036 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
SKA2-202ENST00000437036 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
SKA2-202ENST00000437036 LTN1O94822 1766 aa19.85■□□□□ 0.77
SKA2-202ENST00000437036 INSRP06213 1382 aa19.84■□□□□ 0.77
SKA2-202ENST00000437036 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
SKA2-202ENST00000437036 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
SKA2-202ENST00000437036 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
SKA2-202ENST00000437036 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.77
SKA2-202ENST00000437036 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
SKA2-202ENST00000437036 ANKRD24Q8TF21 1146 aa19.83■□□□□ 0.77
SKA2-202ENST00000437036 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.77
SKA2-202ENST00000437036 TRPC5Q9UL62 973 aaPredicted RBP19.83■□□□□ 0.77
SKA2-202ENST00000437036 CCDC9Q9Y3X0 531 aaKnown RBP19.83■□□□□ 0.77
SKA2-202ENST00000437036 MAP2P11137 1827 aaKnown RBP19.83■□□□□ 0.76
SKA2-202ENST00000437036 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
SKA2-202ENST00000437036 PLCH1Q4KWH8 1693 aa19.82■□□□□ 0.76
SKA2-202ENST00000437036 LMO7Q8WWI1 1683 aa19.82■□□□□ 0.76
SKA2-202ENST00000437036 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
SKA2-202ENST00000437036 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
SKA2-202ENST00000437036 COL5A2P05997 1499 aaPredicted RBP19.81■□□□□ 0.76
SKA2-202ENST00000437036 CDK12Q9NYV4 1490 aaPredicted RBP19.81■□□□□ 0.76
SKA2-202ENST00000437036 COL18A1P39060 1754 aa19.81■□□□□ 0.76
SKA2-202ENST00000437036 VPS72Q15906 364 aa19.81■□□□□ 0.76
SKA2-202ENST00000437036 QTRT2Q9H974 415 aaKnown RBP19.81■□□□□ 0.76
SKA2-202ENST00000437036 ERBB3P21860 1342 aa19.8■□□□□ 0.76
SKA2-202ENST00000437036 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
SKA2-202ENST00000437036 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
SKA2-202ENST00000437036 LARP1Q6PKG0 1096 aaKnown RBP19.79■□□□□ 0.76
SKA2-202ENST00000437036 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
SKA2-202ENST00000437036 PEAK1Q9H792 1746 aa19.78■□□□□ 0.76
SKA2-202ENST00000437036 ATRNO75882 1429 aa19.76■□□□□ 0.75
SKA2-202ENST00000437036 CRB1P82279 1406 aa19.76■□□□□ 0.75
SKA2-202ENST00000437036 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
SKA2-202ENST00000437036 EIF4A2Q14240 407 aaKnown RBP19.76■□□□□ 0.75
SKA2-202ENST00000437036 CARD10Q9BWT7 1032 aa19.76■□□□□ 0.75
SKA2-202ENST00000437036 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
SKA2-202ENST00000437036 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
SKA2-202ENST00000437036 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
SKA2-202ENST00000437036 GJD4Q96KN9 370 aaPredicted RBP19.75■□□□□ 0.75
SKA2-202ENST00000437036 RGS17Q9UGC6 210 aaPredicted RBP19.75■□□□□ 0.75
SKA2-202ENST00000437036 NUDCQ9Y266 331 aa19.75■□□□□ 0.75
SKA2-202ENST00000437036 NRAPQ86VF7 1730 aa19.75■□□□□ 0.75
SKA2-202ENST00000437036 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
SKA2-202ENST00000437036 THRAP3Q9Y2W1 955 aaKnown RBP19.74■□□□□ 0.75
SKA2-202ENST00000437036 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
SKA2-202ENST00000437036 SPATA31A1Q5TZJ5 1347 aa19.74■□□□□ 0.75
SKA2-202ENST00000437036 RXRBP28702 533 aa19.73■□□□□ 0.75
SKA2-202ENST00000437036 RBM6P78332 1123 aaKnown RBP19.73■□□□□ 0.75
SKA2-202ENST00000437036 TCP11L2Q8N4U5 519 aa19.73■□□□□ 0.75
SKA2-202ENST00000437036 IL13P35225 146 aa19.72■□□□□ 0.75
SKA2-202ENST00000437036 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
SKA2-202ENST00000437036 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
SKA2-202ENST00000437036 U2SURPO15042 1029 aaKnown RBP19.7■□□□□ 0.74
SKA2-202ENST00000437036 POTEAQ6S8J7 498 aa19.7■□□□□ 0.74
SKA2-202ENST00000437036 EYA1Q99502 592 aa19.7■□□□□ 0.74
SKA2-202ENST00000437036 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
SKA2-202ENST00000437036 BARGINQ6ZT62 677 aa19.69■□□□□ 0.74
SKA2-202ENST00000437036 CDCA7Q9BWT1 371 aaPredicted RBP19.69■□□□□ 0.74
SKA2-202ENST00000437036 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
SKA2-202ENST00000437036 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
SKA2-202ENST00000437036 COL3A1P02461 1466 aaPredicted RBP19.67■□□□□ 0.74
SKA2-202ENST00000437036 A0A0G2JS52 829 aa19.67■□□□□ 0.74
SKA2-202ENST00000437036 MYT1Q01538 1121 aa19.67■□□□□ 0.74
SKA2-202ENST00000437036 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
SKA2-202ENST00000437036 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
SKA2-202ENST00000437036 IL2RBP14784 551 aa19.66■□□□□ 0.74
SKA2-202ENST00000437036 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
SKA2-202ENST00000437036 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.741e-7■□□□□ 9.5
SKA2-202ENST00000437036 SULT6B1Q6IMI4 303 aa19.65■□□□□ 0.74
SKA2-202ENST00000437036 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
SKA2-202ENST00000437036 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
SKA2-202ENST00000437036 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
SKA2-202ENST00000437036 WDR43Q15061 677 aaKnown RBP eCLIP19.64■□□□□ 0.73
SKA2-202ENST00000437036 GLI3P10071 1580 aa19.63■□□□□ 0.73
SKA2-202ENST00000437036 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
SKA2-202ENST00000437036 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
SKA2-202ENST00000437036 CCER2I3L3R5 266 aa19.61■□□□□ 0.73
SKA2-202ENST00000437036 HMOX1P09601 288 aa19.61■□□□□ 0.73
SKA2-202ENST00000437036 SEPT12Q8IYM1 358 aa19.61■□□□□ 0.73
SKA2-202ENST00000437036 EXOC5O00471 708 aa19.6■□□□□ 0.73
SKA2-202ENST00000437036 DDB1Q16531 1140 aa19.6■□□□□ 0.73
SKA2-202ENST00000437036 AEBP1Q8IUX7 1158 aa19.6■□□□□ 0.73
SKA2-202ENST00000437036 MIER1Q8N108 512 aa19.6■□□□□ 0.73
SKA2-202ENST00000437036 RGPD2P0DJD1 1756 aa19.6■□□□□ 0.73
SKA2-202ENST00000437036 KDRP35968 1356 aa19.59■□□□□ 0.73
SKA2-202ENST00000437036 FCHSD2O94868 740 aa19.59■□□□□ 0.73
SKA2-202ENST00000437036 NEFMP07197 916 aa19.59■□□□□ 0.73
SKA2-202ENST00000437036 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
SKA2-202ENST00000437036 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
SKA2-202ENST00000437036 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms