RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 CCDC9Q9Y3X0 531 aaKnown RBP31.11■■■□□ 2.57
SDHAP1-204ENST00000427415 STRN4Q9NRL3 753 aa31.09■■■□□ 2.57
SDHAP1-204ENST00000427415 COL5A2P05997 1499 aaPredicted RBP31.08■■■□□ 2.57
SDHAP1-204ENST00000427415 EVA1CP58658 441 aa31.08■■■□□ 2.57
SDHAP1-204ENST00000427415 NSD2O96028 1365 aa31.05■■■□□ 2.56
SDHAP1-204ENST00000427415 KNSTRNQ9Y448 316 aa31.05■■■□□ 2.56
SDHAP1-204ENST00000427415 RGS12O14924 1447 aa31.05■■■□□ 2.56
SDHAP1-204ENST00000427415 SPATA31A5Q5VU36 1347 aa31.03■■■□□ 2.56
SDHAP1-204ENST00000427415 SPATA31A7Q8IWB4 1347 aa31.03■■■□□ 2.56
SDHAP1-204ENST00000427415 AXIN2Q9Y2T1 843 aa31■■■□□ 2.55
SDHAP1-204ENST00000427415 MAP3K19Q56UN5 1328 aa30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 BLMP54132 1417 aaPredicted RBP30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 MAP2P11137 1827 aaKnown RBP30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 RTL1A6NKG5 1358 aa30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 LARP1Q6PKG0 1096 aaKnown RBP30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 CRB1P82279 1406 aa30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 SPATA31A1Q5TZJ5 1347 aa30.98■■■□□ 2.55
SDHAP1-204ENST00000427415 WDR17Q8IZU2 1322 aa30.97■■■□□ 2.55
SDHAP1-204ENST00000427415 FAM208AQ9UK61 1670 aaKnown RBP30.95■■■□□ 2.55
SDHAP1-204ENST00000427415 AMPHP49418 695 aa30.95■■■□□ 2.55
SDHAP1-204ENST00000427415 IP6K1Q92551 441 aa30.95■■■□□ 2.55
SDHAP1-204ENST00000427415 CSB-PGBD3P0DP91 1061 aa30.94■■■□□ 2.54
SDHAP1-204ENST00000427415 FBLN1P23142 703 aa30.93■■■□□ 2.54
SDHAP1-204ENST00000427415 RRS1Q15050 365 aaKnown RBP30.93■■■□□ 2.54
SDHAP1-204ENST00000427415 BRWD3Q6RI45 1802 aa30.93■■■□□ 2.54
SDHAP1-204ENST00000427415 KIF24Q5T7B8 1368 aa30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 FAM98CQ17RN3 349 aaKnown RBP30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 AMER1Q5JTC6 1135 aaPredicted RBP30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 TOM1L2Q6ZVM7 507 aa30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 THSD7AQ9UPZ6 1657 aa30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 ERBB3P21860 1342 aa30.92■■■□□ 2.54
SDHAP1-204ENST00000427415 PEAK1Q9H792 1746 aa30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 PER1O15534 1290 aaPredicted RBP30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 ONECUT3O60422 494 aaPredicted RBP30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 HOXC9P31274 260 aa30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 USP35Q9P2H5 1018 aa30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 WNK3Q9BYP7 1800 aa30.91■■■□□ 2.54
SDHAP1-204ENST00000427415 A0A0G2JS52 829 aa30.9■■■□□ 2.54
SDHAP1-204ENST00000427415 MYT1Q01538 1121 aa30.9■■■□□ 2.54
SDHAP1-204ENST00000427415 TCP11L2Q8N4U5 519 aa30.9■■■□□ 2.54
SDHAP1-204ENST00000427415 THRAP3Q9Y2W1 955 aaKnown RBP30.9■■■□□ 2.54
SDHAP1-204ENST00000427415 MORC1Q86VD1 984 aa30.89■■■□□ 2.54
SDHAP1-204ENST00000427415 FLT4P35916 1363 aa30.89■■■□□ 2.54
SDHAP1-204ENST00000427415 BARGINQ6ZT62 677 aa30.88■■■□□ 2.53
SDHAP1-204ENST00000427415 SEPT12Q8IYM1 358 aa30.88■■■□□ 2.53
SDHAP1-204ENST00000427415 ANKRD24Q8TF21 1146 aa30.88■■■□□ 2.53
SDHAP1-204ENST00000427415 SOCS7O14512 581 aa30.87■■■□□ 2.53
SDHAP1-204ENST00000427415 NPC1L1Q9UHC9 1359 aa30.87■■■□□ 2.53
SDHAP1-204ENST00000427415 TNNT2P45379 298 aaPredicted RBP30.86■■■□□ 2.53
SDHAP1-204ENST00000427415 SMG6Q86US8 1419 aaKnown RBP30.85■■■□□ 2.53
SDHAP1-204ENST00000427415 CARD10Q9BWT7 1032 aa30.85■■■□□ 2.53
SDHAP1-204ENST00000427415 EMILIN1Q9Y6C2 1016 aa30.84■■■□□ 2.53
SDHAP1-204ENST00000427415 INSRP06213 1382 aa30.83■■■□□ 2.53
SDHAP1-204ENST00000427415 PARP4Q9UKK3 1724 aaKnown RBP30.83■■■□□ 2.53
SDHAP1-204ENST00000427415 NLRP2Q9NX02 1062 aa30.82■■■□□ 2.52
SDHAP1-204ENST00000427415 PPM1GO15355 546 aaPredicted RBP30.81■■■□□ 2.52
SDHAP1-204ENST00000427415 LTV1Q96GA3 475 aaPredicted RBP30.81■■■□□ 2.52
SDHAP1-204ENST00000427415 RGPD2P0DJD1 1756 aa30.81■■■□□ 2.52
SDHAP1-204ENST00000427415 CC2D1BQ5T0F9 858 aaKnown RBP30.8■■■□□ 2.52
SDHAP1-204ENST00000427415 POLKQ9UBT6 870 aa30.8■■■□□ 2.52
SDHAP1-204ENST00000427415 HSP90AB2PQ58FF8 381 aa30.77■■■□□ 2.52
SDHAP1-204ENST00000427415 KRT27Q7Z3Y8 459 aa30.77■■■□□ 2.52
SDHAP1-204ENST00000427415 CDCA7Q9BWT1 371 aaPredicted RBP30.77■■■□□ 2.52
SDHAP1-204ENST00000427415 LRRC37A3O60309 1634 aa30.76■■■□□ 2.51
SDHAP1-204ENST00000427415 DISP2A7MBM2 1401 aa30.73■■■□□ 2.51
SDHAP1-204ENST00000427415 CNGB1Q14028 1251 aaPredicted RBP30.71■■■□□ 2.51
SDHAP1-204ENST00000427415 DDX10Q13206 875 aaKnown RBP30.68■■■□□ 2.5
SDHAP1-204ENST00000427415 PDE3BQ13370 1112 aa30.68■■■□□ 2.5
SDHAP1-204ENST00000427415 IL2RBP14784 551 aa30.67■■■□□ 2.5
SDHAP1-204ENST00000427415 DDB1Q16531 1140 aa30.67■■■□□ 2.5
SDHAP1-204ENST00000427415 TNS2Q63HR2 1409 aa30.65■■■□□ 2.5
SDHAP1-204ENST00000427415 EP400Q96L91 3159 aa30.65■■■□□ 2.5
SDHAP1-204ENST00000427415 NBPF6Q5VWK0 638 aa30.65■■■□□ 2.5
SDHAP1-204ENST00000427415 NBPF4Q96M43 638 aa30.65■■■□□ 2.5
SDHAP1-204ENST00000427415 ZNF316A6NFI3 1004 aaPredicted RBP30.62■■■□□ 2.49
SDHAP1-204ENST00000427415 EIF4A2Q14240 407 aaKnown RBP30.62■■■□□ 2.49
SDHAP1-204ENST00000427415 UPF1Q92900 1129 aaKnown RBP eCLIP30.62■■■□□ 2.49
SDHAP1-204ENST00000427415 EXOC5O00471 708 aa30.61■■■□□ 2.49
SDHAP1-204ENST00000427415 MTHFSP49914 203 aa30.61■■■□□ 2.49
SDHAP1-204ENST00000427415 USHBP1Q8N6Y0 703 aa30.61■■■□□ 2.49
SDHAP1-204ENST00000427415 NCAPD2Q15021 1401 aa30.6■■■□□ 2.49
SDHAP1-204ENST00000427415 OVOS2A0A0G2JMS6 1433 aa30.58■■■□□ 2.49
SDHAP1-204ENST00000427415 FAM182BQ5T319 152 aa30.58■■■□□ 2.49
SDHAP1-204ENST00000427415 RAPGEF4Q8WZA2 1011 aa30.58■■■□□ 2.49
SDHAP1-204ENST00000427415 MEGF6O75095 1541 aa30.57■■■□□ 2.49
SDHAP1-204ENST00000427415 RGPD1P0DJD0 1748 aa30.57■■■□□ 2.48
SDHAP1-204ENST00000427415 FAM196AQ6ZSG2 479 aa30.57■■■□□ 2.48
SDHAP1-204ENST00000427415 EYA1Q99502 592 aa30.56■■■□□ 2.48
SDHAP1-204ENST00000427415 CCDC125Q86Z20 511 aa30.55■■■□□ 2.48
SDHAP1-204ENST00000427415 PARD3Q8TEW0 1356 aa30.54■■■□□ 2.48
SDHAP1-204ENST00000427415 TATP17735 454 aaPredicted RBP30.54■■■□□ 2.48
SDHAP1-204ENST00000427415 IGSF1Q8N6C5 1336 aa30.53■■■□□ 2.48
SDHAP1-204ENST00000427415 SHANK3Q9BYB0 1731 aa30.53■■■□□ 2.48
SDHAP1-204ENST00000427415 SBF2Q86WG5 1849 aa30.52■■■□□ 2.48
SDHAP1-204ENST00000427415 PPP2R1AP30153 589 aa30.51■■■□□ 2.47
SDHAP1-204ENST00000427415 MARCH10Q8NA82 808 aaPredicted RBP30.51■■■□□ 2.47
SDHAP1-204ENST00000427415 PKD1L3Q7Z443 1732 aa30.5■■■□□ 2.47
SDHAP1-204ENST00000427415 KAT6BQ8WYB5 2073 aa30.5■■■□□ 2.47
SDHAP1-204ENST00000427415 BCL9O00512 1426 aa30.49■■■□□ 2.47
SDHAP1-204ENST00000427415 IL13P35225 146 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms