RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
TMEM248-204ENST00000424964 COL18A1P39060 1754 aa20.26■□□□□ 0.83
TMEM248-204ENST00000424964 NSD2O96028 1365 aa20.26■□□□□ 0.83
TMEM248-204ENST00000424964 AMPHP49418 695 aa20.26■□□□□ 0.83
TMEM248-204ENST00000424964 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
TMEM248-204ENST00000424964 MAP3K19Q56UN5 1328 aa20.26■□□□□ 0.83
TMEM248-204ENST00000424964 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
TMEM248-204ENST00000424964 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
TMEM248-204ENST00000424964 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
TMEM248-204ENST00000424964 RGPD5Q99666 1765 aa20.25■□□□□ 0.83
TMEM248-204ENST00000424964 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
TMEM248-204ENST00000424964 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
TMEM248-204ENST00000424964 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
TMEM248-204ENST00000424964 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
TMEM248-204ENST00000424964 IP6K1Q92551 441 aa20.23■□□□□ 0.83
TMEM248-204ENST00000424964 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
TMEM248-204ENST00000424964 SPATA31A5Q5VU36 1347 aa20.23■□□□□ 0.83
TMEM248-204ENST00000424964 SPATA31A7Q8IWB4 1347 aa20.23■□□□□ 0.83
TMEM248-204ENST00000424964 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
TMEM248-204ENST00000424964 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
TMEM248-204ENST00000424964 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
TMEM248-204ENST00000424964 ABCC6O95255 1503 aa20.21■□□□□ 0.83
TMEM248-204ENST00000424964 PPM1GO15355 546 aaPredicted RBP20.2■□□□□ 0.82
TMEM248-204ENST00000424964 HOXC9P31274 260 aa20.2■□□□□ 0.82
TMEM248-204ENST00000424964 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
TMEM248-204ENST00000424964 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
TMEM248-204ENST00000424964 GLI3P10071 1580 aa20.2■□□□□ 0.82
TMEM248-204ENST00000424964 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
TMEM248-204ENST00000424964 FAM98CQ17RN3 349 aaKnown RBP20.19■□□□□ 0.82
TMEM248-204ENST00000424964 ANKRD24Q8TF21 1146 aa20.19■□□□□ 0.82
TMEM248-204ENST00000424964 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
TMEM248-204ENST00000424964 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
TMEM248-204ENST00000424964 WDR17Q8IZU2 1322 aa20.19■□□□□ 0.82
TMEM248-204ENST00000424964 A0A0G2JS52 829 aa20.18■□□□□ 0.82
TMEM248-204ENST00000424964 MYT1Q01538 1121 aa20.18■□□□□ 0.82
TMEM248-204ENST00000424964 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
TMEM248-204ENST00000424964 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
TMEM248-204ENST00000424964 ZNF316A6NFI3 1004 aaPredicted RBP20.17■□□□□ 0.82
TMEM248-204ENST00000424964 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
TMEM248-204ENST00000424964 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
TMEM248-204ENST00000424964 CRB1P82279 1406 aa20.17■□□□□ 0.82
TMEM248-204ENST00000424964 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
TMEM248-204ENST00000424964 ERBB3P21860 1342 aa20.16■□□□□ 0.82
TMEM248-204ENST00000424964 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
TMEM248-204ENST00000424964 RGS12O14924 1447 aa20.16■□□□□ 0.82
TMEM248-204ENST00000424964 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
TMEM248-204ENST00000424964 NLRP2Q9NX02 1062 aa20.15■□□□□ 0.82
TMEM248-204ENST00000424964 FLT4P35916 1363 aa20.15■□□□□ 0.82
TMEM248-204ENST00000424964 KIF24Q5T7B8 1368 aa20.15■□□□□ 0.82
TMEM248-204ENST00000424964 ONECUT3O60422 494 aaPredicted RBP20.14■□□□□ 0.81
TMEM248-204ENST00000424964 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
TMEM248-204ENST00000424964 CARD10Q9BWT7 1032 aa20.14■□□□□ 0.81
TMEM248-204ENST00000424964 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
TMEM248-204ENST00000424964 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
TMEM248-204ENST00000424964 INSRP06213 1382 aa20.12■□□□□ 0.81
TMEM248-204ENST00000424964 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
TMEM248-204ENST00000424964 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
TMEM248-204ENST00000424964 BRWD3Q6RI45 1802 aa20.07■□□□□ 0.8
TMEM248-204ENST00000424964 MTHFSP49914 203 aa20.07■□□□□ 0.8
TMEM248-204ENST00000424964 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
TMEM248-204ENST00000424964 RGPD2P0DJD1 1756 aa20.06■□□□□ 0.8
TMEM248-204ENST00000424964 KRT27Q7Z3Y8 459 aa20.06■□□□□ 0.8
TMEM248-204ENST00000424964 NBPF6Q5VWK0 638 aa20.05■□□□□ 0.8
TMEM248-204ENST00000424964 NBPF4Q96M43 638 aa20.05■□□□□ 0.8
TMEM248-204ENST00000424964 CDCA7Q9BWT1 371 aaPredicted RBP20.05■□□□□ 0.8
TMEM248-204ENST00000424964 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
TMEM248-204ENST00000424964 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
TMEM248-204ENST00000424964 EIF4A2Q14240 407 aaKnown RBP20.04■□□□□ 0.8
TMEM248-204ENST00000424964 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
TMEM248-204ENST00000424964 IL2RBP14784 551 aa20.03■□□□□ 0.8
TMEM248-204ENST00000424964 DDB1Q16531 1140 aa20.02■□□□□ 0.8
TMEM248-204ENST00000424964 EXOC5O00471 708 aa20.01■□□□□ 0.79
TMEM248-204ENST00000424964 SOCS7O14512 581 aa20.01■□□□□ 0.79
TMEM248-204ENST00000424964 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
TMEM248-204ENST00000424964 PPP2R1AP30153 589 aa20■□□□□ 0.79
TMEM248-204ENST00000424964 EYA1Q99502 592 aa20■□□□□ 0.79
TMEM248-204ENST00000424964 DISP2A7MBM2 1401 aa20■□□□□ 0.79
TMEM248-204ENST00000424964 PARP4Q9UKK3 1724 aaKnown RBP19.99■□□□□ 0.79
TMEM248-204ENST00000424964 FAM182BQ5T319 152 aa19.99■□□□□ 0.79
TMEM248-204ENST00000424964 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
TMEM248-204ENST00000424964 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
TMEM248-204ENST00000424964 RALBP1Q15311 655 aa19.97■□□□□ 0.79
TMEM248-204ENST00000424964 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
TMEM248-204ENST00000424964 DIAPH1O60610 1272 aaKnown RBP19.96■□□□□ 0.79
TMEM248-204ENST00000424964 TATP17735 454 aaPredicted RBP19.96■□□□□ 0.79
TMEM248-204ENST00000424964 IL13P35225 146 aa19.96■□□□□ 0.79
TMEM248-204ENST00000424964 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
TMEM248-204ENST00000424964 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
TMEM248-204ENST00000424964 FAM196AQ6ZSG2 479 aa19.93■□□□□ 0.78
TMEM248-204ENST00000424964 ZCRB1Q8TBF4 217 aaKnown RBP19.93■□□□□ 0.78
TMEM248-204ENST00000424964 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
TMEM248-204ENST00000424964 TNS2Q63HR2 1409 aa19.93■□□□□ 0.78
TMEM248-204ENST00000424964 MEGF6O75095 1541 aa19.92■□□□□ 0.78
TMEM248-204ENST00000424964 MARCH10Q8NA82 808 aaPredicted RBP19.92■□□□□ 0.78
TMEM248-204ENST00000424964 DDX54Q8TDD1 881 aaKnown RBP19.92■□□□□ 0.78
TMEM248-204ENST00000424964 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
TMEM248-204ENST00000424964 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
TMEM248-204ENST00000424964 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
TMEM248-204ENST00000424964 OVOS2A0A0G2JMS6 1433 aa19.9■□□□□ 0.78
TMEM248-204ENST00000424964 AEBP1Q8IUX7 1158 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms