RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 ANKRD26Q9UPS8 1709 aa24.66■■□□□ 1.54
MSL3-208ENST00000421368 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
MSL3-208ENST00000421368 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
MSL3-208ENST00000421368 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
MSL3-208ENST00000421368 EVA1CP58658 441 aa24.63■■□□□ 1.53
MSL3-208ENST00000421368 PANK3Q9H999 370 aa24.63■■□□□ 1.53
MSL3-208ENST00000421368 LARP1Q6PKG0 1096 aaKnown RBP24.62■■□□□ 1.53
MSL3-208ENST00000421368 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
MSL3-208ENST00000421368 THSD7AQ9UPZ6 1657 aa24.61■■□□□ 1.53
MSL3-208ENST00000421368 CCDC7Q96M83 1385 aa24.6■■□□□ 1.53
MSL3-208ENST00000421368 ONECUT3O60422 494 aaPredicted RBP24.6■■□□□ 1.53
MSL3-208ENST00000421368 FBLN1P23142 703 aa24.59■■□□□ 1.53
MSL3-208ENST00000421368 CGNL1Q0VF96 1302 aa24.59■■□□□ 1.53
MSL3-208ENST00000421368 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
MSL3-208ENST00000421368 WNK3Q9BYP7 1800 aa24.58■■□□□ 1.53
MSL3-208ENST00000421368 FAM98CQ17RN3 349 aaKnown RBP24.58■■□□□ 1.53
MSL3-208ENST00000421368 MAP2P11137 1827 aaKnown RBP24.58■■□□□ 1.53
MSL3-208ENST00000421368 SEPT12Q8IYM1 358 aa24.57■■□□□ 1.52
MSL3-208ENST00000421368 CRB1P82279 1406 aa24.57■■□□□ 1.52
MSL3-208ENST00000421368 EP400Q96L91 3159 aa24.56■■□□□ 1.52
MSL3-208ENST00000421368 MAP3K19Q56UN5 1328 aa24.56■■□□□ 1.52
MSL3-208ENST00000421368 WDR17Q8IZU2 1322 aa24.56■■□□□ 1.52
MSL3-208ENST00000421368 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
MSL3-208ENST00000421368 PEAK1Q9H792 1746 aa24.55■■□□□ 1.52
MSL3-208ENST00000421368 BLMP54132 1417 aaPredicted RBP24.52■■□□□ 1.52
MSL3-208ENST00000421368 RGPD2P0DJD1 1756 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 A0A0G2JS52 829 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 MYT1Q01538 1121 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 RRS1Q15050 365 aaKnown RBP24.52■■□□□ 1.52
MSL3-208ENST00000421368 TOM1L2Q6ZVM7 507 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 TCP11L2Q8N4U5 519 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 IP6K1Q92551 441 aa24.52■■□□□ 1.52
MSL3-208ENST00000421368 FAM208AQ9UK61 1670 aaKnown RBP24.52■■□□□ 1.52
MSL3-208ENST00000421368 PARP4Q9UKK3 1724 aaKnown RBP24.52■■□□□ 1.52
MSL3-208ENST00000421368 BARGINQ6ZT62 677 aa24.51■■□□□ 1.51
MSL3-208ENST00000421368 ERBB3P21860 1342 aa24.51■■□□□ 1.51
MSL3-208ENST00000421368 CSB-PGBD3P0DP91 1061 aa24.49■■□□□ 1.51
MSL3-208ENST00000421368 HOXC9P31274 260 aa24.49■■□□□ 1.51
MSL3-208ENST00000421368 THRAP3Q9Y2W1 955 aaKnown RBP24.49■■□□□ 1.51
MSL3-208ENST00000421368 RTL1A6NKG5 1358 aa24.49■■□□□ 1.51
MSL3-208ENST00000421368 NSD2O96028 1365 aa24.48■■□□□ 1.51
MSL3-208ENST00000421368 AMPHP49418 695 aa24.48■■□□□ 1.51
MSL3-208ENST00000421368 ANKRD24Q8TF21 1146 aa24.48■■□□□ 1.51
MSL3-208ENST00000421368 KNSTRNQ9Y448 316 aa24.48■■□□□ 1.51
MSL3-208ENST00000421368 CARD10Q9BWT7 1032 aa24.47■■□□□ 1.51
MSL3-208ENST00000421368 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
MSL3-208ENST00000421368 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
MSL3-208ENST00000421368 LRRC37A3O60309 1634 aa24.46■■□□□ 1.51
MSL3-208ENST00000421368 PER1O15534 1290 aaPredicted RBP24.45■■□□□ 1.5
MSL3-208ENST00000421368 ZEB1P37275 1124 aaPredicted RBP24.44■■□□□ 1.5
MSL3-208ENST00000421368 AMER1Q5JTC6 1135 aaPredicted RBP24.44■■□□□ 1.5
MSL3-208ENST00000421368 EMILIN1Q9Y6C2 1016 aa24.44■■□□□ 1.5
MSL3-208ENST00000421368 KIF24Q5T7B8 1368 aa24.43■■□□□ 1.5
MSL3-208ENST00000421368 LTV1Q96GA3 475 aaPredicted RBP24.43■■□□□ 1.5
MSL3-208ENST00000421368 FLT4P35916 1363 aa24.42■■□□□ 1.5
MSL3-208ENST00000421368 NLRP2Q9NX02 1062 aa24.42■■□□□ 1.5
MSL3-208ENST00000421368 DISP2A7MBM2 1401 aa24.42■■□□□ 1.5
MSL3-208ENST00000421368 TNNT2P45379 298 aaPredicted RBP24.41■■□□□ 1.5
MSL3-208ENST00000421368 INSRP06213 1382 aa24.4■■□□□ 1.5
MSL3-208ENST00000421368 HSP90AB2PQ58FF8 381 aa24.39■■□□□ 1.49
MSL3-208ENST00000421368 MORC1Q86VD1 984 aa24.39■■□□□ 1.49
MSL3-208ENST00000421368 POLKQ9UBT6 870 aa24.39■■□□□ 1.49
MSL3-208ENST00000421368 FAM182BQ5T319 152 aa24.38■■□□□ 1.49
MSL3-208ENST00000421368 PPM1GO15355 546 aaPredicted RBP24.36■■□□□ 1.49
MSL3-208ENST00000421368 CDCA7Q9BWT1 371 aaPredicted RBP24.36■■□□□ 1.49
MSL3-208ENST00000421368 SMG6Q86US8 1419 aaKnown RBP24.35■■□□□ 1.49
MSL3-208ENST00000421368 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
MSL3-208ENST00000421368 SBF2Q86WG5 1849 aa24.34■■□□□ 1.49
MSL3-208ENST00000421368 PDE3BQ13370 1112 aa24.34■■□□□ 1.49
MSL3-208ENST00000421368 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.49
MSL3-208ENST00000421368 DDB1Q16531 1140 aa24.33■■□□□ 1.49
MSL3-208ENST00000421368 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.49
MSL3-208ENST00000421368 NBPF6Q5VWK0 638 aa24.32■■□□□ 1.48
MSL3-208ENST00000421368 NBPF4Q96M43 638 aa24.32■■□□□ 1.48
MSL3-208ENST00000421368 TNS1Q9HBL0 1735 aaKnown RBP24.32■■□□□ 1.48
MSL3-208ENST00000421368 TNS2Q63HR2 1409 aa24.31■■□□□ 1.48
MSL3-208ENST00000421368 IL2RBP14784 551 aa24.3■■□□□ 1.48
MSL3-208ENST00000421368 SHANK3Q9BYB0 1731 aa24.3■■□□□ 1.48
MSL3-208ENST00000421368 USHBP1Q8N6Y0 703 aa24.29■■□□□ 1.48
MSL3-208ENST00000421368 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
MSL3-208ENST00000421368 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
MSL3-208ENST00000421368 KAT6BQ8WYB5 2073 aa24.27■■□□□ 1.48
MSL3-208ENST00000421368 MEGF6O75095 1541 aa24.27■■□□□ 1.48
MSL3-208ENST00000421368 EXOC5O00471 708 aa24.27■■□□□ 1.48
MSL3-208ENST00000421368 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
MSL3-208ENST00000421368 OVOS2A0A0G2JMS6 1433 aa24.27■■□□□ 1.48
MSL3-208ENST00000421368 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
MSL3-208ENST00000421368 MARCH10Q8NA82 808 aaPredicted RBP24.26■■□□□ 1.47
MSL3-208ENST00000421368 EIF4A2Q14240 407 aaKnown RBP24.25■■□□□ 1.47
MSL3-208ENST00000421368 EYA1Q99502 592 aa24.22■■□□□ 1.47
MSL3-208ENST00000421368 PKD1L3Q7Z443 1732 aa24.21■■□□□ 1.47
MSL3-208ENST00000421368 BCL9O00512 1426 aa24.2■■□□□ 1.46
MSL3-208ENST00000421368 TRIM37O94972 964 aa24.2■■□□□ 1.46
MSL3-208ENST00000421368 MTHFSP49914 203 aa24.2■■□□□ 1.46
MSL3-208ENST00000421368 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.46
MSL3-208ENST00000421368 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
MSL3-208ENST00000421368 RAPGEF4Q8WZA2 1011 aa24.19■■□□□ 1.46
MSL3-208ENST00000421368 TATP17735 454 aaPredicted RBP24.17■■□□□ 1.46
MSL3-208ENST00000421368 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
MSL3-208ENST00000421368 NHSQ6T4R5 1651 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms