RNA–Protein interactions for RNA: ENST00000420006.5

SNHG11-204, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3 BASIC

Gene SNHG11, Length 720 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-204ENST00000420006 STRN4Q9NRL3 753 aa23.81■■□□□ 1.4
SNHG11-204ENST00000420006 EVA1CP58658 441 aa23.8■■□□□ 1.4
SNHG11-204ENST00000420006 COL5A2P05997 1499 aaPredicted RBP23.8■■□□□ 1.4
SNHG11-204ENST00000420006 RGS12O14924 1447 aa23.79■■□□□ 1.4
SNHG11-204ENST00000420006 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
SNHG11-204ENST00000420006 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
SNHG11-204ENST00000420006 NSD2O96028 1365 aa23.76■■□□□ 1.39
SNHG11-204ENST00000420006 KNSTRNQ9Y448 316 aa23.75■■□□□ 1.39
SNHG11-204ENST00000420006 SPATA31A5Q5VU36 1347 aa23.75■■□□□ 1.39
SNHG11-204ENST00000420006 SPATA31A7Q8IWB4 1347 aa23.75■■□□□ 1.39
SNHG11-204ENST00000420006 RTL1A6NKG5 1358 aa23.72■■□□□ 1.39
SNHG11-204ENST00000420006 BLMP54132 1417 aaPredicted RBP23.72■■□□□ 1.39
SNHG11-204ENST00000420006 CRB1P82279 1406 aa23.72■■□□□ 1.39
SNHG11-204ENST00000420006 SPATA31A1Q5TZJ5 1347 aa23.71■■□□□ 1.39
SNHG11-204ENST00000420006 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
SNHG11-204ENST00000420006 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
SNHG11-204ENST00000420006 MAP3K19Q56UN5 1328 aa23.7■■□□□ 1.38
SNHG11-204ENST00000420006 A0A0G2JS52 829 aa23.7■■□□□ 1.38
SNHG11-204ENST00000420006 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.38
SNHG11-204ENST00000420006 AMPHP49418 695 aa23.7■■□□□ 1.38
SNHG11-204ENST00000420006 MYT1Q01538 1121 aa23.7■■□□□ 1.38
SNHG11-204ENST00000420006 FAM208AQ9UK61 1670 aaKnown RBP23.7■■□□□ 1.38
SNHG11-204ENST00000420006 WDR17Q8IZU2 1322 aa23.69■■□□□ 1.38
SNHG11-204ENST00000420006 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
SNHG11-204ENST00000420006 TOM1L2Q6ZVM7 507 aa23.68■■□□□ 1.38
SNHG11-204ENST00000420006 USP35Q9P2H5 1018 aa23.68■■□□□ 1.38
SNHG11-204ENST00000420006 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
SNHG11-204ENST00000420006 RRS1Q15050 365 aaKnown RBP23.67■■□□□ 1.38
SNHG11-204ENST00000420006 IP6K1Q92551 441 aa23.67■■□□□ 1.38
SNHG11-204ENST00000420006 MAP2P11137 1827 aaKnown RBP23.67■■□□□ 1.38
SNHG11-204ENST00000420006 BRWD3Q6RI45 1802 aa23.67■■□□□ 1.38
SNHG11-204ENST00000420006 ERBB3P21860 1342 aa23.66■■□□□ 1.38
SNHG11-204ENST00000420006 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
SNHG11-204ENST00000420006 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
SNHG11-204ENST00000420006 WNK3Q9BYP7 1800 aa23.66■■□□□ 1.38
SNHG11-204ENST00000420006 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
SNHG11-204ENST00000420006 HOXC9P31274 260 aa23.65■■□□□ 1.38
SNHG11-204ENST00000420006 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
SNHG11-204ENST00000420006 ONECUT3O60422 494 aaPredicted RBP23.64■■□□□ 1.37
SNHG11-204ENST00000420006 FBLN1P23142 703 aa23.64■■□□□ 1.37
SNHG11-204ENST00000420006 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
SNHG11-204ENST00000420006 FLT4P35916 1363 aa23.64■■□□□ 1.37
SNHG11-204ENST00000420006 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
SNHG11-204ENST00000420006 SMG6Q86US8 1419 aaKnown RBP23.63■■□□□ 1.37
SNHG11-204ENST00000420006 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
SNHG11-204ENST00000420006 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
SNHG11-204ENST00000420006 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
SNHG11-204ENST00000420006 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
SNHG11-204ENST00000420006 PARP4Q9UKK3 1724 aaKnown RBP23.61■■□□□ 1.37
SNHG11-204ENST00000420006 PER1O15534 1290 aaPredicted RBP23.6■■□□□ 1.37
SNHG11-204ENST00000420006 CARD10Q9BWT7 1032 aa23.6■■□□□ 1.37
SNHG11-204ENST00000420006 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
SNHG11-204ENST00000420006 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
SNHG11-204ENST00000420006 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
SNHG11-204ENST00000420006 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
SNHG11-204ENST00000420006 INSRP06213 1382 aa23.58■■□□□ 1.37
SNHG11-204ENST00000420006 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
SNHG11-204ENST00000420006 LRRC37A3O60309 1634 aa23.56■■□□□ 1.36
SNHG11-204ENST00000420006 CC2D1BQ5T0F9 858 aaKnown RBP23.56■■□□□ 1.36
SNHG11-204ENST00000420006 KRT27Q7Z3Y8 459 aa23.56■■□□□ 1.36
SNHG11-204ENST00000420006 CDCA7Q9BWT1 371 aaPredicted RBP23.56■■□□□ 1.36
SNHG11-204ENST00000420006 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
SNHG11-204ENST00000420006 POLKQ9UBT6 870 aa23.55■■□□□ 1.36
SNHG11-204ENST00000420006 HSP90AB2PQ58FF8 381 aa23.54■■□□□ 1.36
SNHG11-204ENST00000420006 DISP2A7MBM2 1401 aa23.51■■□□□ 1.35
SNHG11-204ENST00000420006 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
SNHG11-204ENST00000420006 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
SNHG11-204ENST00000420006 IL2RBP14784 551 aa23.48■■□□□ 1.35
SNHG11-204ENST00000420006 DDB1Q16531 1140 aa23.48■■□□□ 1.35
SNHG11-204ENST00000420006 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
SNHG11-204ENST00000420006 EP400Q96L91 3159 aa23.47■■□□□ 1.35
SNHG11-204ENST00000420006 UPF1Q92900 1129 aaKnown RBP eCLIP23.46■■□□□ 1.35
SNHG11-204ENST00000420006 NBPF6Q5VWK0 638 aa23.44■■□□□ 1.34
SNHG11-204ENST00000420006 NBPF4Q96M43 638 aa23.44■■□□□ 1.34
SNHG11-204ENST00000420006 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
SNHG11-204ENST00000420006 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
SNHG11-204ENST00000420006 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
SNHG11-204ENST00000420006 EXOC5O00471 708 aa23.42■■□□□ 1.34
SNHG11-204ENST00000420006 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
SNHG11-204ENST00000420006 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
SNHG11-204ENST00000420006 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
SNHG11-204ENST00000420006 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
SNHG11-204ENST00000420006 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
SNHG11-204ENST00000420006 MEGF6O75095 1541 aa23.4■■□□□ 1.34
SNHG11-204ENST00000420006 MTHFSP49914 203 aa23.4■■□□□ 1.34
SNHG11-204ENST00000420006 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
SNHG11-204ENST00000420006 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
SNHG11-204ENST00000420006 SF3B2Q13435 895 aaKnown RBP23.38■■□□□ 1.33
SNHG11-204ENST00000420006 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
SNHG11-204ENST00000420006 TATP17735 454 aaPredicted RBP23.37■■□□□ 1.33
SNHG11-204ENST00000420006 EYA1Q99502 592 aa23.37■■□□□ 1.33
SNHG11-204ENST00000420006 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
SNHG11-204ENST00000420006 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
SNHG11-204ENST00000420006 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
SNHG11-204ENST00000420006 SBF2Q86WG5 1849 aa23.35■■□□□ 1.33
SNHG11-204ENST00000420006 PKD1L3Q7Z443 1732 aa23.34■■□□□ 1.33
SNHG11-204ENST00000420006 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
SNHG11-204ENST00000420006 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
SNHG11-204ENST00000420006 BCL9O00512 1426 aa23.33■■□□□ 1.33
SNHG11-204ENST00000420006 CFAP53Q96M91 514 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms