RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
ATG4B-208ENST00000419606 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
ATG4B-208ENST00000419606 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
ATG4B-208ENST00000419606 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-208ENST00000419606 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-208ENST00000419606 IP6K1Q92551 441 aa17.29■□□□□ 0.36
ATG4B-208ENST00000419606 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
ATG4B-208ENST00000419606 FLT4P35916 1363 aa17.28■□□□□ 0.36
ATG4B-208ENST00000419606 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
ATG4B-208ENST00000419606 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
ATG4B-208ENST00000419606 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-208ENST00000419606 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
ATG4B-208ENST00000419606 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
ATG4B-208ENST00000419606 INSRP06213 1382 aa17.26■□□□□ 0.35
ATG4B-208ENST00000419606 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
ATG4B-208ENST00000419606 EIF4A2Q14240 407 aaKnown RBP17.25■□□□□ 0.35
ATG4B-208ENST00000419606 C8orf37Q96NL8 207 aa17.25■□□□□ 0.35
ATG4B-208ENST00000419606 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
ATG4B-208ENST00000419606 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
ATG4B-208ENST00000419606 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
ATG4B-208ENST00000419606 BTG4Q9NY30 223 aa17.24■□□□□ 0.35
ATG4B-208ENST00000419606 ABCC6O95255 1503 aa17.24■□□□□ 0.35
ATG4B-208ENST00000419606 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-208ENST00000419606 IL13P35225 146 aa17.23■□□□□ 0.35
ATG4B-208ENST00000419606 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
ATG4B-208ENST00000419606 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
ATG4B-208ENST00000419606 NRAPQ86VF7 1730 aa17.23■□□□□ 0.35
ATG4B-208ENST00000419606 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
ATG4B-208ENST00000419606 NGLY1Q96IV0 654 aa17.22■□□□□ 0.35
ATG4B-208ENST00000419606 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-208ENST00000419606 SLIT2O94813 1529 aa17.21■□□□□ 0.35
ATG4B-208ENST00000419606 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
ATG4B-208ENST00000419606 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
ATG4B-208ENST00000419606 ERBB3P21860 1342 aa17.21■□□□□ 0.34
ATG4B-208ENST00000419606 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
ATG4B-208ENST00000419606 NWD2Q9ULI1 1742 aa17.2■□□□□ 0.34
ATG4B-208ENST00000419606 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
ATG4B-208ENST00000419606 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
ATG4B-208ENST00000419606 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
ATG4B-208ENST00000419606 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
ATG4B-208ENST00000419606 EYA1Q99502 592 aa17.19■□□□□ 0.34
ATG4B-208ENST00000419606 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
ATG4B-208ENST00000419606 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
ATG4B-208ENST00000419606 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
ATG4B-208ENST00000419606 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
ATG4B-208ENST00000419606 EVA1CP58658 441 aa17.17■□□□□ 0.34
ATG4B-208ENST00000419606 FNBP4Q8N3X1 1017 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-208ENST00000419606 AFF2P51816 1311 aa17.17■□□□□ 0.34
ATG4B-208ENST00000419606 HMOX1P09601 288 aa17.16■□□□□ 0.34
ATG4B-208ENST00000419606 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
ATG4B-208ENST00000419606 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
ATG4B-208ENST00000419606 NLRP2Q9NX02 1062 aa17.16■□□□□ 0.34
ATG4B-208ENST00000419606 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
ATG4B-208ENST00000419606 WDR17Q8IZU2 1322 aa17.16■□□□□ 0.34
ATG4B-208ENST00000419606 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-208ENST00000419606 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATG4B-208ENST00000419606 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
ATG4B-208ENST00000419606 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
ATG4B-208ENST00000419606 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
ATG4B-208ENST00000419606 SOCS7O14512 581 aa17.14■□□□□ 0.33
ATG4B-208ENST00000419606 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
ATG4B-208ENST00000419606 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
ATG4B-208ENST00000419606 USP21Q9UK80 565 aa17.14■□□□□ 0.33
ATG4B-208ENST00000419606 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
ATG4B-208ENST00000419606 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATG4B-208ENST00000419606 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
ATG4B-208ENST00000419606 CRB1P82279 1406 aa17.13■□□□□ 0.33
ATG4B-208ENST00000419606 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
ATG4B-208ENST00000419606 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
ATG4B-208ENST00000419606 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
ATG4B-208ENST00000419606 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
ATG4B-208ENST00000419606 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
ATG4B-208ENST00000419606 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
ATG4B-208ENST00000419606 VPS72Q15906 364 aa17.09■□□□□ 0.33
ATG4B-208ENST00000419606 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
ATG4B-208ENST00000419606 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
ATG4B-208ENST00000419606 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
ATG4B-208ENST00000419606 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
ATG4B-208ENST00000419606 KDRP35968 1356 aa17.09■□□□□ 0.33
ATG4B-208ENST00000419606 ATRNO75882 1429 aa17.08■□□□□ 0.32
ATG4B-208ENST00000419606 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
ATG4B-208ENST00000419606 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-208ENST00000419606 GLI3P10071 1580 aa17.07■□□□□ 0.32
ATG4B-208ENST00000419606 MEGF6O75095 1541 aa17.07■□□□□ 0.32
ATG4B-208ENST00000419606 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
ATG4B-208ENST00000419606 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
ATG4B-208ENST00000419606 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
ATG4B-208ENST00000419606 FCHSD2O94868 740 aa17.06■□□□□ 0.32
ATG4B-208ENST00000419606 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
ATG4B-208ENST00000419606 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
ATG4B-208ENST00000419606 TRPC5Q9UL62 973 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-208ENST00000419606 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
ATG4B-208ENST00000419606 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
ATG4B-208ENST00000419606 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-208ENST00000419606 PARP4Q9UKK3 1724 aaKnown RBP17.03■□□□□ 0.32
ATG4B-208ENST00000419606 IL2RBP14784 551 aa17.02■□□□□ 0.32
ATG4B-208ENST00000419606 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-208ENST00000419606 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
ATG4B-208ENST00000419606 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-208ENST00000419606 RAPGEF4Q8WZA2 1011 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms