RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
HNF4A-204ENST00000415691 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
HNF4A-204ENST00000415691 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
HNF4A-204ENST00000415691 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
HNF4A-204ENST00000415691 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
HNF4A-204ENST00000415691 MTHFSP49914 203 aa17.14■□□□□ 0.33
HNF4A-204ENST00000415691 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
HNF4A-204ENST00000415691 NHSL1Q5SYE7 1610 aa17.13■□□□□ 0.33
HNF4A-204ENST00000415691 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
HNF4A-204ENST00000415691 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
HNF4A-204ENST00000415691 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
HNF4A-204ENST00000415691 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
HNF4A-204ENST00000415691 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
HNF4A-204ENST00000415691 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
HNF4A-204ENST00000415691 GCP02774 474 aa17.11■□□□□ 0.33
HNF4A-204ENST00000415691 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
HNF4A-204ENST00000415691 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
HNF4A-204ENST00000415691 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
HNF4A-204ENST00000415691 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-204ENST00000415691 USP19O94966 1318 aa17.09■□□□□ 0.33
HNF4A-204ENST00000415691 ARHGEF10O15013 1369 aa17.09■□□□□ 0.33
HNF4A-204ENST00000415691 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
HNF4A-204ENST00000415691 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.33
HNF4A-204ENST00000415691 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.33
HNF4A-204ENST00000415691 MED1Q15648 1581 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-204ENST00000415691 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
HNF4A-204ENST00000415691 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
HNF4A-204ENST00000415691 PHLPP1O60346 1717 aa17.06■□□□□ 0.32
HNF4A-204ENST00000415691 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
HNF4A-204ENST00000415691 PKNOX2Q96KN3 472 aa17.06■□□□□ 0.32
HNF4A-204ENST00000415691 HSPA1LP34931 641 aa17.05■□□□□ 0.32
HNF4A-204ENST00000415691 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
HNF4A-204ENST00000415691 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
HNF4A-204ENST00000415691 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
HNF4A-204ENST00000415691 COL16A1Q07092 1604 aaPredicted RBP17.04■□□□□ 0.32
HNF4A-204ENST00000415691 SLIT3O75094 1523 aa17.04■□□□□ 0.32
HNF4A-204ENST00000415691 AMPHP49418 695 aa17.04■□□□□ 0.32
HNF4A-204ENST00000415691 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
HNF4A-204ENST00000415691 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
HNF4A-204ENST00000415691 INSRP06213 1382 aa17.03■□□□□ 0.32
HNF4A-204ENST00000415691 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
HNF4A-204ENST00000415691 NFAT5O94916 1531 aa17.03■□□□□ 0.32
HNF4A-204ENST00000415691 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
HNF4A-204ENST00000415691 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
HNF4A-204ENST00000415691 CHRNA2Q15822 529 aa17.02■□□□□ 0.31
HNF4A-204ENST00000415691 HOXC9P31274 260 aa17.01■□□□□ 0.31
HNF4A-204ENST00000415691 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
HNF4A-204ENST00000415691 PEAK1Q9H792 1746 aa17■□□□□ 0.31
HNF4A-204ENST00000415691 NUTM2BA6NNL0 878 aaPredicted RBP16.99■□□□□ 0.31
HNF4A-204ENST00000415691 NUTM2EB1AL46 878 aaPredicted RBP16.99■□□□□ 0.31
HNF4A-204ENST00000415691 NUTM2AQ8IVF1 878 aaPredicted RBP16.99■□□□□ 0.31
HNF4A-204ENST00000415691 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
HNF4A-204ENST00000415691 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
HNF4A-204ENST00000415691 IP6K1Q92551 441 aa16.99■□□□□ 0.31
HNF4A-204ENST00000415691 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
HNF4A-204ENST00000415691 IL13P35225 146 aa16.98■□□□□ 0.31
HNF4A-204ENST00000415691 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
HNF4A-204ENST00000415691 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
HNF4A-204ENST00000415691 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
HNF4A-204ENST00000415691 COL3A1P02461 1466 aaPredicted RBP16.98■□□□□ 0.31
HNF4A-204ENST00000415691 CRYBG1Q9Y4K1 1723 aa16.98■□□□□ 0.31
HNF4A-204ENST00000415691 FLT4P35916 1363 aa16.97■□□□□ 0.31
HNF4A-204ENST00000415691 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
HNF4A-204ENST00000415691 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
HNF4A-204ENST00000415691 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
HNF4A-204ENST00000415691 CDK12Q9NYV4 1490 aaPredicted RBP16.97■□□□□ 0.31
HNF4A-204ENST00000415691 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.313e-15■■□□□ 11.4
HNF4A-204ENST00000415691 PRDM11Q9NQV5 511 aa16.96■□□□□ 0.31
HNF4A-204ENST00000415691 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
HNF4A-204ENST00000415691 ADAMTS2O95450 1211 aa16.96■□□□□ 0.3
HNF4A-204ENST00000415691 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
HNF4A-204ENST00000415691 JCADQ9P266 1359 aa16.95■□□□□ 0.3
HNF4A-204ENST00000415691 LTN1O94822 1766 aa16.95■□□□□ 0.3
HNF4A-204ENST00000415691 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
HNF4A-204ENST00000415691 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
HNF4A-204ENST00000415691 CPDO75976 1380 aa16.94■□□□□ 0.3
HNF4A-204ENST00000415691 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
HNF4A-204ENST00000415691 COL22A1Q8NFW1 1626 aaPredicted RBP16.94■□□□□ 0.3
HNF4A-204ENST00000415691 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
HNF4A-204ENST00000415691 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
HNF4A-204ENST00000415691 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
HNF4A-204ENST00000415691 HMOX1P09601 288 aa16.92■□□□□ 0.3
HNF4A-204ENST00000415691 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
HNF4A-204ENST00000415691 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
HNF4A-204ENST00000415691 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
HNF4A-204ENST00000415691 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
HNF4A-204ENST00000415691 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
HNF4A-204ENST00000415691 EYA1Q99502 592 aa16.91■□□□□ 0.3
HNF4A-204ENST00000415691 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 NBPF6Q5VWK0 638 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 NBPF4Q96M43 638 aa16.9■□□□□ 0.3
HNF4A-204ENST00000415691 COL18A1P39060 1754 aa16.89■□□□□ 0.3
HNF4A-204ENST00000415691 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
HNF4A-204ENST00000415691 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
HNF4A-204ENST00000415691 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
HNF4A-204ENST00000415691 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms