RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
PTPN12-203ENST00000415482 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
PTPN12-203ENST00000415482 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
PTPN12-203ENST00000415482 COL16A1Q07092 1604 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-203ENST00000415482 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
PTPN12-203ENST00000415482 IP6K1Q92551 441 aa13.04□□□□□ -0.32
PTPN12-203ENST00000415482 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
PTPN12-203ENST00000415482 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
PTPN12-203ENST00000415482 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
PTPN12-203ENST00000415482 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
PTPN12-203ENST00000415482 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.32
PTPN12-203ENST00000415482 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
PTPN12-203ENST00000415482 COL18A1P39060 1754 aa13.02□□□□□ -0.33
PTPN12-203ENST00000415482 HMOX1P09601 288 aa13.02□□□□□ -0.33
PTPN12-203ENST00000415482 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.33
PTPN12-203ENST00000415482 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
PTPN12-203ENST00000415482 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
PTPN12-203ENST00000415482 CHRNA2Q15822 529 aa13.01□□□□□ -0.33
PTPN12-203ENST00000415482 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
PTPN12-203ENST00000415482 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
PTPN12-203ENST00000415482 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
PTPN12-203ENST00000415482 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 APAF1O14727 1248 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 RUNDC1Q96C34 613 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 CPDO75976 1380 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 EYA1Q99502 592 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
PTPN12-203ENST00000415482 FCHSD2O94868 740 aa12.99□□□□□ -0.33
PTPN12-203ENST00000415482 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
PTPN12-203ENST00000415482 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
PTPN12-203ENST00000415482 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
PTPN12-203ENST00000415482 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
PTPN12-203ENST00000415482 IGSF1Q8N6C5 1336 aa12.98□□□□□ -0.33
PTPN12-203ENST00000415482 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
PTPN12-203ENST00000415482 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
PTPN12-203ENST00000415482 PHACTR3Q96KR7 559 aa12.97□□□□□ -0.33
PTPN12-203ENST00000415482 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
PTPN12-203ENST00000415482 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
PTPN12-203ENST00000415482 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
PTPN12-203ENST00000415482 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
PTPN12-203ENST00000415482 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
PTPN12-203ENST00000415482 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
PTPN12-203ENST00000415482 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 CAMTA1Q9Y6Y1 1673 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 ABCC6O95255 1503 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 ERBB3P21860 1342 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 KDRP35968 1356 aa12.95□□□□□ -0.34
PTPN12-203ENST00000415482 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
PTPN12-203ENST00000415482 HSPA1LP34931 641 aa12.94□□□□□ -0.34
PTPN12-203ENST00000415482 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
PTPN12-203ENST00000415482 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
PTPN12-203ENST00000415482 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
PTPN12-203ENST00000415482 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN12-203ENST00000415482 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN12-203ENST00000415482 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN12-203ENST00000415482 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
PTPN12-203ENST00000415482 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
PTPN12-203ENST00000415482 CDCA7LQ96GN5 454 aa12.91□□□□□ -0.34
PTPN12-203ENST00000415482 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
PTPN12-203ENST00000415482 JCADQ9P266 1359 aa12.91□□□□□ -0.34
PTPN12-203ENST00000415482 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
PTPN12-203ENST00000415482 PHF23Q9BUL5 403 aaPredicted RBP12.91□□□□□ -0.34
PTPN12-203ENST00000415482 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
PTPN12-203ENST00000415482 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
PTPN12-203ENST00000415482 CSB-PGBD3P0DP91 1061 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 FAM208AQ9UK61 1670 aaKnown RBP12.9□□□□□ -0.34
PTPN12-203ENST00000415482 RIPK4P57078 832 aa12.9□□□□□ -0.34
PTPN12-203ENST00000415482 NEFMP07197 916 aa12.89□□□□□ -0.35
PTPN12-203ENST00000415482 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
PTPN12-203ENST00000415482 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
PTPN12-203ENST00000415482 STRN4Q9NRL3 753 aa12.89□□□□□ -0.35
PTPN12-203ENST00000415482 BTG4Q9NY30 223 aa12.89□□□□□ -0.35
PTPN12-203ENST00000415482 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
PTPN12-203ENST00000415482 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
PTPN12-203ENST00000415482 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
PTPN12-203ENST00000415482 PLCH1Q4KWH8 1693 aa12.88□□□□□ -0.35
PTPN12-203ENST00000415482 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
PTPN12-203ENST00000415482 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
PTPN12-203ENST00000415482 LRP6O75581 1613 aa12.87□□□□□ -0.35
PTPN12-203ENST00000415482 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
PTPN12-203ENST00000415482 EVA1CP58658 441 aa12.86□□□□□ -0.35
PTPN12-203ENST00000415482 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
PTPN12-203ENST00000415482 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
PTPN12-203ENST00000415482 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
PTPN12-203ENST00000415482 MEGF6O75095 1541 aa12.85□□□□□ -0.35
PTPN12-203ENST00000415482 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
PTPN12-203ENST00000415482 NRAPQ86VF7 1730 aa12.84□□□□□ -0.35
PTPN12-203ENST00000415482 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
PTPN12-203ENST00000415482 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
PTPN12-203ENST00000415482 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
PTPN12-203ENST00000415482 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
PTPN12-203ENST00000415482 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
PTPN12-203ENST00000415482 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
PTPN12-203ENST00000415482 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms