RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 USP21Q9UK80 565 aa41.6■■■■■ 4.25
CSNK1E-206ENST00000413574 NRAPQ86VF7 1730 aa41.59■■■■■ 4.25
CSNK1E-206ENST00000413574 POLKQ9UBT6 870 aa41.58■■■■■ 4.25
CSNK1E-206ENST00000413574 RGS17Q9UGC6 210 aaPredicted RBP41.58■■■■■ 4.25
CSNK1E-206ENST00000413574 AMPHP49418 695 aa41.57■■■■■ 4.25
CSNK1E-206ENST00000413574 PPM1GO15355 546 aaPredicted RBP41.56■■■■■ 4.24
CSNK1E-206ENST00000413574 HOXC9P31274 260 aa41.54■■■■■ 4.24
CSNK1E-206ENST00000413574 IP6K1Q92551 441 aa41.54■■■■■ 4.24
CSNK1E-206ENST00000413574 UNC5CLQ8IV45 518 aa41.53■■■■■ 4.24
CSNK1E-206ENST00000413574 STRN4Q9NRL3 753 aa41.53■■■■■ 4.24
CSNK1E-206ENST00000413574 TNKS1BP1Q9C0C2 1729 aaKnown RBP41.52■■■■■ 4.24
CSNK1E-206ENST00000413574 ABCC6O95255 1503 aa41.52■■■■■ 4.24
CSNK1E-206ENST00000413574 COL5A2P05997 1499 aaPredicted RBP41.51■■■■■ 4.24
CSNK1E-206ENST00000413574 PARD3Q8TEW0 1356 aa41.49■■■■■ 4.23
CSNK1E-206ENST00000413574 RTL1A6NKG5 1358 aa41.48■■■■■ 4.23
CSNK1E-206ENST00000413574 FLT4P35916 1363 aa41.48■■■■■ 4.23
CSNK1E-206ENST00000413574 EVA1CP58658 441 aa41.47■■■■■ 4.23
CSNK1E-206ENST00000413574 HSP90AB2PQ58FF8 381 aa41.47■■■■■ 4.23
CSNK1E-206ENST00000413574 ZNF772Q68DY9 489 aaPredicted RBP41.47■■■■■ 4.23
CSNK1E-206ENST00000413574 BLMP54132 1417 aaPredicted RBP41.45■■■■■ 4.23
CSNK1E-206ENST00000413574 SMG6Q86US8 1419 aaKnown RBP41.45■■■■■ 4.23
CSNK1E-206ENST00000413574 LTV1Q96GA3 475 aaPredicted RBP41.44■■■■■ 4.22
CSNK1E-206ENST00000413574 KIF24Q5T7B8 1368 aa41.44■■■■■ 4.22
CSNK1E-206ENST00000413574 MTHFSP49914 203 aa41.44■■■■■ 4.22
CSNK1E-206ENST00000413574 LARP1Q6PKG0 1096 aaKnown RBP41.44■■■■■ 4.22
CSNK1E-206ENST00000413574 QTRT2Q9H974 415 aaKnown RBP41.44■■■■■ 4.22
CSNK1E-206ENST00000413574 PPP2R1AP30153 589 aa41.43■■■■■ 4.22
CSNK1E-206ENST00000413574 ANKRD24Q8TF21 1146 aa41.42■■■■■ 4.22
CSNK1E-206ENST00000413574 ATRNO75882 1429 aa41.41■■■■■ 4.22
CSNK1E-206ENST00000413574 POTEAQ6S8J7 498 aa41.41■■■■■ 4.22
CSNK1E-206ENST00000413574 TRPC5Q9UL62 973 aaPredicted RBP41.4■■■■■ 4.22
CSNK1E-206ENST00000413574 INSRP06213 1382 aa41.4■■■■■ 4.22
CSNK1E-206ENST00000413574 ERBB3P21860 1342 aa41.4■■■■■ 4.22
CSNK1E-206ENST00000413574 CCDC9Q9Y3X0 531 aaKnown RBP41.4■■■■■ 4.22
CSNK1E-206ENST00000413574 RALBP1Q15311 655 aa41.39■■■■■ 4.22
CSNK1E-206ENST00000413574 VPS72Q15906 364 aa41.39■■■■■ 4.22
CSNK1E-206ENST00000413574 CSB-PGBD3P0DP91 1061 aa41.38■■■■■ 4.21
CSNK1E-206ENST00000413574 PRKRIP1Q9H875 184 aaPredicted RBP41.38■■■■■ 4.21
CSNK1E-206ENST00000413574 RGPD2P0DJD1 1756 aa41.38■■■■■ 4.21
CSNK1E-206ENST00000413574 WDR17Q8IZU2 1322 aa41.37■■■■■ 4.21
CSNK1E-206ENST00000413574 CDK12Q9NYV4 1490 aaPredicted RBP41.37■■■■■ 4.21
CSNK1E-206ENST00000413574 TOM1L2Q6ZVM7 507 aa41.33■■■■■ 4.21
CSNK1E-206ENST00000413574 USP35Q9P2H5 1018 aa41.33■■■■■ 4.21
CSNK1E-206ENST00000413574 GLI3P10071 1580 aa41.32■■■■■ 4.2
CSNK1E-206ENST00000413574 CRB1P82279 1406 aa41.31■■■■■ 4.2
CSNK1E-206ENST00000413574 SPATA31A5Q5VU36 1347 aa41.31■■■■■ 4.2
CSNK1E-206ENST00000413574 SPATA31A7Q8IWB4 1347 aa41.31■■■■■ 4.2
CSNK1E-206ENST00000413574 GJD4Q96KN9 370 aaPredicted RBP41.31■■■■■ 4.2
CSNK1E-206ENST00000413574 EIF4A2Q14240 407 aaKnown RBP41.29■■■■■ 4.2
CSNK1E-206ENST00000413574 NLRP2Q9NX02 1062 aa41.29■■■■■ 4.2
CSNK1E-206ENST00000413574 SPATA31A1Q5TZJ5 1347 aa41.28■■■■■ 4.2
CSNK1E-206ENST00000413574 FAM208AQ9UK61 1670 aaKnown RBP41.28■■■■■ 4.2
CSNK1E-206ENST00000413574 MYBBP1AQ9BQG0 1328 aaKnown RBP41.25■■■■■ 4.19
CSNK1E-206ENST00000413574 ANP32CO43423 234 aa41.25■■■■■ 4.19
CSNK1E-206ENST00000413574 RBM6P78332 1123 aaKnown RBP41.23■■■■■ 4.19
CSNK1E-206ENST00000413574 NBPF6Q5VWK0 638 aa41.23■■■■■ 4.19
CSNK1E-206ENST00000413574 NBPF4Q96M43 638 aa41.23■■■■■ 4.19
CSNK1E-206ENST00000413574 CARD10Q9BWT7 1032 aa41.23■■■■■ 4.19
CSNK1E-206ENST00000413574 RXRBP28702 533 aa41.22■■■■■ 4.19
CSNK1E-206ENST00000413574 COL3A1P02461 1466 aaPredicted RBP41.22■■■■■ 4.19
CSNK1E-206ENST00000413574 USHBP1Q8N6Y0 703 aa41.21■■■■■ 4.19
CSNK1E-206ENST00000413574 FAM98CQ17RN3 349 aaKnown RBP41.19■■■■■ 4.18
CSNK1E-206ENST00000413574 IL13P35225 146 aa41.18■■■■■ 4.18
CSNK1E-206ENST00000413574 TCP11L2Q8N4U5 519 aa41.18■■■■■ 4.18
CSNK1E-206ENST00000413574 EYA1Q99502 592 aa41.18■■■■■ 4.18
CSNK1E-206ENST00000413574 CFAP53Q96M91 514 aa41.17■■■■■ 4.18
CSNK1E-206ENST00000413574 DIEXFQ68CQ4 756 aaKnown RBP41.16■■■■■ 4.18
CSNK1E-206ENST00000413574 DIAPH1O60610 1272 aaKnown RBP41.15■■■■■ 4.18
CSNK1E-206ENST00000413574 WNK3Q9BYP7 1800 aa41.14■■■■■ 4.18
CSNK1E-206ENST00000413574 RGPD1P0DJD0 1748 aa41.12■■■■■ 4.17
CSNK1E-206ENST00000413574 THRAP3Q9Y2W1 955 aaKnown RBP41.12■■■■■ 4.17
CSNK1E-206ENST00000413574 BARGINQ6ZT62 677 aa41.1■■■■■ 4.17
CSNK1E-206ENST00000413574 IGSF1Q8N6C5 1336 aa41.07■■■■■ 4.17
CSNK1E-206ENST00000413574 A0A0G2JS52 829 aa41.07■■■■■ 4.16
CSNK1E-206ENST00000413574 ONECUT3O60422 494 aaPredicted RBP41.07■■■■■ 4.16
CSNK1E-206ENST00000413574 MYT1Q01538 1121 aa41.07■■■■■ 4.16
CSNK1E-206ENST00000413574 THSD7AQ9UPZ6 1657 aa41.07■■■■■ 4.16
CSNK1E-206ENST00000413574 RGS12O14924 1447 aa41.06■■■■■ 4.16
CSNK1E-206ENST00000413574 NCAPD2Q15021 1401 aa41.05■■■■■ 4.16
CSNK1E-206ENST00000413574 U2SURPO15042 1029 aaKnown RBP41.04■■■■■ 4.16
CSNK1E-206ENST00000413574 SEPT12Q8IYM1 358 aa41.04■■■■■ 4.16
CSNK1E-206ENST00000413574 DISP2A7MBM2 1401 aa41.04■■■■■ 4.16
CSNK1E-206ENST00000413574 CCDC184Q52MB2 194 aa41.04■■■■■ 4.16
CSNK1E-206ENST00000413574 AEBP1Q8IUX7 1158 aa41.04■■■■■ 4.16
CSNK1E-206ENST00000413574 BRWD3Q6RI45 1802 aa41.02■■■■■ 4.16
CSNK1E-206ENST00000413574 IL2RBP14784 551 aa41.01■■■■■ 4.16
CSNK1E-206ENST00000413574 MEGF6O75095 1541 aa41.01■■■■■ 4.15
CSNK1E-206ENST00000413574 SULT6B1Q6IMI4 303 aa41■■■■■ 4.15
CSNK1E-206ENST00000413574 PARP4Q9UKK3 1724 aaKnown RBP41■■■■■ 4.15
CSNK1E-206ENST00000413574 HMOX1P09601 288 aa40.99■■■■■ 4.15
CSNK1E-206ENST00000413574 NUDCQ9Y266 331 aa40.97■■■■■ 4.15
CSNK1E-206ENST00000413574 LRRC37A3O60309 1634 aa40.97■■■■■ 4.15
CSNK1E-206ENST00000413574 RAPGEF4Q8WZA2 1011 aa40.95■■■■■ 4.15
CSNK1E-206ENST00000413574 CDCA7Q9BWT1 371 aaPredicted RBP40.95■■■■■ 4.15
CSNK1E-206ENST00000413574 U2AF1L5P0DN76 240 aaPredicted RBP40.93■■■■■ 4.14
CSNK1E-206ENST00000413574 U2AF1Q01081 240 aaKnown RBP eCLIP40.93■■■■■ 4.14
CSNK1E-206ENST00000413574 KDRP35968 1356 aa40.92■■■■■ 4.14
CSNK1E-206ENST00000413574 TATP17735 454 aaPredicted RBP40.91■■■■■ 4.14
CSNK1E-206ENST00000413574 DDB1Q16531 1140 aa40.9■■■■■ 4.14
CSNK1E-206ENST00000413574 ILDR2Q71H61 639 aa40.9■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms