RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-203ENST00000413184 PHRF1Q9P1Y6 1649 aaKnown RBP11.38□□□□□ -0.59
CPSF7-203ENST00000413184 DDB1Q16531 1140 aa11.37□□□□□ -0.59
CPSF7-203ENST00000413184 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
CPSF7-203ENST00000413184 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
CPSF7-203ENST00000413184 FMN2Q9NZ56 1722 aa11.36□□□□□ -0.59
CPSF7-203ENST00000413184 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
CPSF7-203ENST00000413184 HABP4Q5JVS0 413 aaKnown RBP11.35□□□□□ -0.59
CPSF7-203ENST00000413184 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
CPSF7-203ENST00000413184 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
CPSF7-203ENST00000413184 TNRC6CQ9HCJ0 1690 aaKnown RBP11.35□□□□□ -0.59
CPSF7-203ENST00000413184 LRRC37A3O60309 1634 aa11.35□□□□□ -0.59
CPSF7-203ENST00000413184 RGPD8O14715 1765 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-203ENST00000413184 NRXN1Q9ULB1 1477 aa11.34□□□□□ -0.59
CPSF7-203ENST00000413184 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
CPSF7-203ENST00000413184 MSH5O43196 834 aa11.34□□□□□ -0.59
CPSF7-203ENST00000413184 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
CPSF7-203ENST00000413184 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
CPSF7-203ENST00000413184 AKAP12Q02952 1782 aa11.33□□□□□ -0.6
CPSF7-203ENST00000413184 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
CPSF7-203ENST00000413184 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
CPSF7-203ENST00000413184 BCL9O00512 1426 aa11.32□□□□□ -0.6
CPSF7-203ENST00000413184 BRD4O60885 1362 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-203ENST00000413184 CNTNAP1P78357 1384 aa11.31□□□□□ -0.6
CPSF7-203ENST00000413184 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
CPSF7-203ENST00000413184 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
CPSF7-203ENST00000413184 ZC3H6P61129 1189 aaKnown RBP11.31□□□□□ -0.6
CPSF7-203ENST00000413184 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-203ENST00000413184 MCOLN1Q9GZU1 580 aa11.3□□□□□ -0.6
CPSF7-203ENST00000413184 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
CPSF7-203ENST00000413184 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-203ENST00000413184 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
CPSF7-203ENST00000413184 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
CPSF7-203ENST00000413184 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-203ENST00000413184 SOX10P56693 466 aa11.28□□□□□ -0.6
CPSF7-203ENST00000413184 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
CPSF7-203ENST00000413184 A0A0C4DFX4 3053 aa11.27□□□□□ -0.6
CPSF7-203ENST00000413184 MYOM3Q5VTT5 1437 aa11.27□□□□□ -0.6
CPSF7-203ENST00000413184 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
CPSF7-203ENST00000413184 VEGFBP49765 207 aa11.27□□□□□ -0.61
CPSF7-203ENST00000413184 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
CPSF7-203ENST00000413184 E9PCH4 1651 aa11.26□□□□□ -0.61
CPSF7-203ENST00000413184 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
CPSF7-203ENST00000413184 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-203ENST00000413184 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
CPSF7-203ENST00000413184 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-203ENST00000413184 GPRASP1Q5JY77 1395 aa11.25□□□□□ -0.61
CPSF7-203ENST00000413184 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
CPSF7-203ENST00000413184 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-203ENST00000413184 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
CPSF7-203ENST00000413184 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
CPSF7-203ENST00000413184 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
CPSF7-203ENST00000413184 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
CPSF7-203ENST00000413184 ANKRD30BQ9BXX2 1392 aa11.23□□□□□ -0.61
CPSF7-203ENST00000413184 CRB1P82279 1406 aa11.23□□□□□ -0.61
CPSF7-203ENST00000413184 PIK3C2AO00443 1686 aa11.22□□□□□ -0.61
CPSF7-203ENST00000413184 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-203ENST00000413184 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-203ENST00000413184 ANKRD30AQ9BXX3 1397 aa11.21□□□□□ -0.61
CPSF7-203ENST00000413184 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.61
CPSF7-203ENST00000413184 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
CPSF7-203ENST00000413184 STK26Q9P289 416 aa11.21□□□□□ -0.61
CPSF7-203ENST00000413184 BTAF1O14981 1849 aa11.21□□□□□ -0.62
CPSF7-203ENST00000413184 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
CPSF7-203ENST00000413184 DGKZQ13574 1117 aa11.2□□□□□ -0.62
CPSF7-203ENST00000413184 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
CPSF7-203ENST00000413184 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
CPSF7-203ENST00000413184 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
CPSF7-203ENST00000413184 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
CPSF7-203ENST00000413184 TRPM1Q7Z4N2 1603 aa11.19□□□□□ -0.62
CPSF7-203ENST00000413184 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-203ENST00000413184 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
CPSF7-203ENST00000413184 USP6P35125 1406 aa11.18□□□□□ -0.62
CPSF7-203ENST00000413184 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
CPSF7-203ENST00000413184 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-203ENST00000413184 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-203ENST00000413184 EXOC5O00471 708 aa11.16□□□□□ -0.62
CPSF7-203ENST00000413184 KCNQ4P56696 695 aa11.16□□□□□ -0.62
CPSF7-203ENST00000413184 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
CPSF7-203ENST00000413184 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
CPSF7-203ENST00000413184 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.62
CPSF7-203ENST00000413184 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
CPSF7-203ENST00000413184 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
CPSF7-203ENST00000413184 FCHSD2O94868 740 aa11.14□□□□□ -0.63
CPSF7-203ENST00000413184 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-203ENST00000413184 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
CPSF7-203ENST00000413184 WDR33Q9C0J8 1336 aaKnown RBP11.12□□□□□ -0.63
CPSF7-203ENST00000413184 DAPK1P53355 1430 aa11.12□□□□□ -0.63
CPSF7-203ENST00000413184 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
CPSF7-203ENST00000413184 COL18A1P39060 1754 aa11.12□□□□□ -0.63
CPSF7-203ENST00000413184 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-203ENST00000413184 DEFB115Q30KQ5 88 aa11.11□□□□□ -0.63
CPSF7-203ENST00000413184 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
CPSF7-203ENST00000413184 CPDO75976 1380 aa11.11□□□□□ -0.63
CPSF7-203ENST00000413184 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
CPSF7-203ENST00000413184 PRR36Q9H6K5 1346 aa11.1□□□□□ -0.63
CPSF7-203ENST00000413184 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
CPSF7-203ENST00000413184 GLTPD2A6NH11 291 aa11.1□□□□□ -0.63
CPSF7-203ENST00000413184 NGDNQ8NEJ9 315 aaKnown RBP11.1□□□□□ -0.63
CPSF7-203ENST00000413184 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms