RNA–Protein interactions for RNA: ENST00000409908.5

MDH1-203, Transcript of malate dehydrogenase 1, humanhuman

TSL 3 BASIC

Gene MDH1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-203ENST00000409908 COG3Q96JB2 828 aa14.88□□□□□ -0.03
MDH1-203ENST00000409908 FNBP4Q8N3X1 1017 aaPredicted RBP14.87□□□□□ -0.03
MDH1-203ENST00000409908 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
MDH1-203ENST00000409908 COL22A1Q8NFW1 1626 aaPredicted RBP14.87□□□□□ -0.03
MDH1-203ENST00000409908 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
MDH1-203ENST00000409908 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
MDH1-203ENST00000409908 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
MDH1-203ENST00000409908 EDC4Q6P2E9 1401 aaKnown RBP14.85□□□□□ -0.03
MDH1-203ENST00000409908 NSD3Q9BZ95 1437 aa14.85□□□□□ -0.03
MDH1-203ENST00000409908 RXRBP28702 533 aa14.85□□□□□ -0.03
MDH1-203ENST00000409908 UNC5CLQ8IV45 518 aa14.85□□□□□ -0.03
MDH1-203ENST00000409908 LTV1Q96GA3 475 aaPredicted RBP14.85□□□□□ -0.03
MDH1-203ENST00000409908 MON2Q7Z3U7 1717 aa14.85□□□□□ -0.03
MDH1-203ENST00000409908 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
MDH1-203ENST00000409908 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
MDH1-203ENST00000409908 PIK3C2AO00443 1686 aa14.84□□□□□ -0.03
MDH1-203ENST00000409908 RRS1Q15050 365 aaKnown RBP14.84□□□□□ -0.03
MDH1-203ENST00000409908 KCNH5Q8NCM2 988 aa14.84□□□□□ -0.03
MDH1-203ENST00000409908 USP19O94966 1318 aa14.84□□□□□ -0.03
MDH1-203ENST00000409908 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
MDH1-203ENST00000409908 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
MDH1-203ENST00000409908 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
MDH1-203ENST00000409908 ARHGEF25Q86VW2 580 aa14.83□□□□□ -0.04
MDH1-203ENST00000409908 TRPC5Q9UL62 973 aaPredicted RBP14.83□□□□□ -0.04
MDH1-203ENST00000409908 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
MDH1-203ENST00000409908 MYOM1P52179 1685 aa14.83□□□□□ -0.04
MDH1-203ENST00000409908 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
MDH1-203ENST00000409908 MARF1Q9Y4F3 1742 aaKnown RBP14.82□□□□□ -0.04
MDH1-203ENST00000409908 BCL9LQ86UU0 1499 aa14.82□□□□□ -0.04
MDH1-203ENST00000409908 ABCA3Q99758 1704 aa14.81□□□□□ -0.04
MDH1-203ENST00000409908 LARP1Q6PKG0 1096 aaKnown RBP14.81□□□□□ -0.04
MDH1-203ENST00000409908 GJD4Q96KN9 370 aaPredicted RBP14.81□□□□□ -0.04
MDH1-203ENST00000409908 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
MDH1-203ENST00000409908 A0A0G2JS52 829 aa14.8□□□□□ -0.04
MDH1-203ENST00000409908 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
MDH1-203ENST00000409908 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
MDH1-203ENST00000409908 AMPHP49418 695 aa14.8□□□□□ -0.04
MDH1-203ENST00000409908 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
MDH1-203ENST00000409908 MYT1Q01538 1121 aa14.8□□□□□ -0.04
MDH1-203ENST00000409908 MORC1Q86VD1 984 aa14.8□□□□□ -0.04
MDH1-203ENST00000409908 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
MDH1-203ENST00000409908 CGNL1Q0VF96 1302 aa14.79□□□□□ -0.04
MDH1-203ENST00000409908 NRKQ7Z2Y5 1582 aa14.79□□□□□ -0.04
MDH1-203ENST00000409908 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
MDH1-203ENST00000409908 RGPD5Q99666 1765 aa14.78□□□□□ -0.04
MDH1-203ENST00000409908 FAM98CQ17RN3 349 aaKnown RBP14.78□□□□□ -0.04
MDH1-203ENST00000409908 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.04
MDH1-203ENST00000409908 SLIT2O94813 1529 aa14.77□□□□□ -0.04
MDH1-203ENST00000409908 MAP3K19Q56UN5 1328 aa14.77□□□□□ -0.04
MDH1-203ENST00000409908 VPS72Q15906 364 aa14.77□□□□□ -0.05
MDH1-203ENST00000409908 TOM1L2Q6ZVM7 507 aa14.77□□□□□ -0.05
MDH1-203ENST00000409908 EMILIN1Q9Y6C2 1016 aa14.77□□□□□ -0.05
MDH1-203ENST00000409908 ZBTB22O15209 634 aa14.76□□□□□ -0.05
MDH1-203ENST00000409908 GABBR2O75899 941 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 HSP90AB2PQ58FF8 381 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
MDH1-203ENST00000409908 FAM182BQ5T319 152 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 IP6K1Q92551 441 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 SLIT3O75094 1523 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 OVOS2A0A0J9YW53 1432 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 OVOS2Q6IE36 1432 aa14.75□□□□□ -0.05
MDH1-203ENST00000409908 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
MDH1-203ENST00000409908 HOXC9P31274 260 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 SEPT12Q8IYM1 358 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 NLRP2Q9NX02 1062 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
MDH1-203ENST00000409908 ATRNO75882 1429 aa14.74□□□□□ -0.05
MDH1-203ENST00000409908 CPDO75976 1380 aa14.73□□□□□ -0.05
MDH1-203ENST00000409908 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
MDH1-203ENST00000409908 LHX8Q68G74 356 aa14.73□□□□□ -0.05
MDH1-203ENST00000409908 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
MDH1-203ENST00000409908 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
MDH1-203ENST00000409908 AATKQ6ZMQ8 1374 aa14.73□□□□□ -0.05
MDH1-203ENST00000409908 SPATA31A5Q5VU36 1347 aa14.72□□□□□ -0.05
MDH1-203ENST00000409908 SPATA31A7Q8IWB4 1347 aa14.72□□□□□ -0.05
MDH1-203ENST00000409908 USHBP1Q8N6Y0 703 aa14.72□□□□□ -0.05
MDH1-203ENST00000409908 SPATA31A1Q5TZJ5 1347 aa14.71□□□□□ -0.05
MDH1-203ENST00000409908 LTN1O94822 1766 aa14.71□□□□□ -0.05
MDH1-203ENST00000409908 COL18A1P39060 1754 aa14.71□□□□□ -0.05
MDH1-203ENST00000409908 NFAT5O94916 1531 aa14.71□□□□□ -0.06
MDH1-203ENST00000409908 SSUH2Q9Y2M2 353 aa14.7□□□□□ -0.06
MDH1-203ENST00000409908 TCP11L2Q8N4U5 519 aa14.69□□□□□ -0.06
MDH1-203ENST00000409908 MTHFSP49914 203 aa14.68□□□□□ -0.06
MDH1-203ENST00000409908 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
MDH1-203ENST00000409908 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
MDH1-203ENST00000409908 GLI3P10071 1580 aa14.68□□□□□ -0.06
MDH1-203ENST00000409908 WDR17Q8IZU2 1322 aa14.67□□□□□ -0.06
MDH1-203ENST00000409908 NRAPQ86VF7 1730 aa14.67□□□□□ -0.06
MDH1-203ENST00000409908 NWD2Q9ULI1 1742 aa14.67□□□□□ -0.06
MDH1-203ENST00000409908 COL5A2P05997 1499 aaPredicted RBP14.67□□□□□ -0.06
MDH1-203ENST00000409908 LMO7Q8WWI1 1683 aa14.66□□□□□ -0.06
MDH1-203ENST00000409908 ONECUT3O60422 494 aaPredicted RBP14.66□□□□□ -0.06
MDH1-203ENST00000409908 CARD10Q9BWT7 1032 aa14.66□□□□□ -0.06
MDH1-203ENST00000409908 RGS12O14924 1447 aa14.66□□□□□ -0.06
MDH1-203ENST00000409908 RGPD2P0DJD1 1756 aa14.65□□□□□ -0.06
MDH1-203ENST00000409908 ERBB3P21860 1342 aa14.65□□□□□ -0.06
MDH1-203ENST00000409908 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
MDH1-203ENST00000409908 EIF4A2Q14240 407 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms