RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
RPE-203ENST00000408981 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
RPE-203ENST00000408981 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
RPE-203ENST00000408981 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
RPE-203ENST00000408981 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
RPE-203ENST00000408981 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
RPE-203ENST00000408981 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
RPE-203ENST00000408981 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
RPE-203ENST00000408981 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
RPE-203ENST00000408981 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
RPE-203ENST00000408981 BCL9O00512 1426 aa13.05□□□□□ -0.32
RPE-203ENST00000408981 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
RPE-203ENST00000408981 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
RPE-203ENST00000408981 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
RPE-203ENST00000408981 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
RPE-203ENST00000408981 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
RPE-203ENST00000408981 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
RPE-203ENST00000408981 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
RPE-203ENST00000408981 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
RPE-203ENST00000408981 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
RPE-203ENST00000408981 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
RPE-203ENST00000408981 RRAGCQ9HB90 399 aa13.01□□□□□ -0.33
RPE-203ENST00000408981 KDM2BQ8NHM5 1336 aa13.01□□□□□ -0.33
RPE-203ENST00000408981 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
RPE-203ENST00000408981 PRPF38BQ5VTL8 546 aaKnown RBP13□□□□□ -0.33
RPE-203ENST00000408981 CRB1P82279 1406 aa12.99□□□□□ -0.33
RPE-203ENST00000408981 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
RPE-203ENST00000408981 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
RPE-203ENST00000408981 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
RPE-203ENST00000408981 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
RPE-203ENST00000408981 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
RPE-203ENST00000408981 ANKRD30BQ9BXX2 1392 aa12.98□□□□□ -0.33
RPE-203ENST00000408981 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
RPE-203ENST00000408981 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
RPE-203ENST00000408981 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
RPE-203ENST00000408981 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
RPE-203ENST00000408981 DLL1O00548 723 aa12.96□□□□□ -0.33
RPE-203ENST00000408981 NUTM2GQ5VZR2 741 aa12.96□□□□□ -0.33
RPE-203ENST00000408981 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
RPE-203ENST00000408981 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
RPE-203ENST00000408981 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
RPE-203ENST00000408981 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
RPE-203ENST00000408981 COL5A2P05997 1499 aaPredicted RBP12.95□□□□□ -0.34
RPE-203ENST00000408981 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
RPE-203ENST00000408981 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
RPE-203ENST00000408981 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
RPE-203ENST00000408981 TOM1L2Q6ZVM7 507 aa12.93□□□□□ -0.34
RPE-203ENST00000408981 NGDNQ8NEJ9 315 aaKnown RBP12.93□□□□□ -0.34
RPE-203ENST00000408981 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
RPE-203ENST00000408981 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
RPE-203ENST00000408981 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
RPE-203ENST00000408981 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
RPE-203ENST00000408981 WBP1LQ9NX94 342 aa12.92□□□□□ -0.34
RPE-203ENST00000408981 NHSQ6T4R5 1651 aa12.92□□□□□ -0.34
RPE-203ENST00000408981 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
RPE-203ENST00000408981 EXOC5O00471 708 aa12.91□□□□□ -0.34
RPE-203ENST00000408981 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
RPE-203ENST00000408981 NUP155O75694 1391 aa12.91□□□□□ -0.34
RPE-203ENST00000408981 USP6P35125 1406 aa12.9□□□□□ -0.34
RPE-203ENST00000408981 KCNQ4P56696 695 aa12.9□□□□□ -0.34
RPE-203ENST00000408981 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
RPE-203ENST00000408981 CPDO75976 1380 aa12.9□□□□□ -0.34
RPE-203ENST00000408981 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
RPE-203ENST00000408981 SAFB2Q14151 953 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPE-203ENST00000408981 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
RPE-203ENST00000408981 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
RPE-203ENST00000408981 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
RPE-203ENST00000408981 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
RPE-203ENST00000408981 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
RPE-203ENST00000408981 BTAF1O14981 1849 aa12.86□□□□□ -0.35
RPE-203ENST00000408981 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
RPE-203ENST00000408981 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
RPE-203ENST00000408981 VEGFBP49765 207 aa12.85□□□□□ -0.35
RPE-203ENST00000408981 KIF1BO60333 1816 aa12.85□□□□□ -0.35
RPE-203ENST00000408981 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
RPE-203ENST00000408981 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
RPE-203ENST00000408981 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
RPE-203ENST00000408981 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
RPE-203ENST00000408981 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.35
RPE-203ENST00000408981 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
RPE-203ENST00000408981 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
RPE-203ENST00000408981 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
RPE-203ENST00000408981 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
RPE-203ENST00000408981 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
RPE-203ENST00000408981 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
RPE-203ENST00000408981 FCHSD2O94868 740 aa12.8□□□□□ -0.36
RPE-203ENST00000408981 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
RPE-203ENST00000408981 HABP4Q5JVS0 413 aaKnown RBP12.8□□□□□ -0.36
RPE-203ENST00000408981 PRAM1Q96QH2 718 aa12.8□□□□□ -0.36
RPE-203ENST00000408981 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
RPE-203ENST00000408981 GCP02774 474 aa12.79□□□□□ -0.36
RPE-203ENST00000408981 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
RPE-203ENST00000408981 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
RPE-203ENST00000408981 SOX10P56693 466 aa12.78□□□□□ -0.36
RPE-203ENST00000408981 POGKQ9P215 609 aa12.78□□□□□ -0.36
RPE-203ENST00000408981 PPLO60437 1756 aa12.78□□□□□ -0.36
RPE-203ENST00000408981 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
RPE-203ENST00000408981 FLAD1Q8NFF5 587 aa12.77□□□□□ -0.37
RPE-203ENST00000408981 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
RPE-203ENST00000408981 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms