RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 DDX41Q9UJV9 622 aaKnown RBP15.54■□□□□ 0.08
HERC3-203ENST00000407637 ERICH4A6NGS2 130 aa15.54■□□□□ 0.08
HERC3-203ENST00000407637 TERF2Q15554 542 aa15.54■□□□□ 0.08
HERC3-203ENST00000407637 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
HERC3-203ENST00000407637 UVSSAQ2YD98 709 aa15.53■□□□□ 0.08
HERC3-203ENST00000407637 C1orf115Q9H7X2 142 aa15.53■□□□□ 0.08
HERC3-203ENST00000407637 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
HERC3-203ENST00000407637 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.08
HERC3-203ENST00000407637 FAM184AQ8NB25 1140 aa15.53■□□□□ 0.08
HERC3-203ENST00000407637 CLTCL1P53675 1640 aa15.53■□□□□ 0.08
HERC3-203ENST00000407637 IRX3P78415 501 aaPredicted RBP15.52■□□□□ 0.08
HERC3-203ENST00000407637 TCHHQ07283 1943 aa15.52■□□□□ 0.08
HERC3-203ENST00000407637 NOS1P29475 1434 aa15.52■□□□□ 0.07
HERC3-203ENST00000407637 ST18O60284 1047 aa15.52■□□□□ 0.07
HERC3-203ENST00000407637 PHF14O94880 888 aa15.52■□□□□ 0.07
HERC3-203ENST00000407637 PLCB2Q00722 1185 aa15.52■□□□□ 0.07
HERC3-203ENST00000407637 ANKRD36BQ8N2N9 1353 aa15.52■□□□□ 0.07
HERC3-203ENST00000407637 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 CT47B1P0C2W7 299 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 FOXD4L6Q3SYB3 417 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 FOXD4L3Q6VB84 417 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 ZFP91Q96JP5 570 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 USP26Q9BXU7 913 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 TRIM34Q9BYJ4 488 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 GDPD2Q9HCC8 539 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 PPRC1Q5VV67 1664 aaKnown RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 UNC13BO14795 1591 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
HERC3-203ENST00000407637 NAA30Q147X3 362 aaPredicted RBP15.51■□□□□ 0.07
HERC3-203ENST00000407637 TULP2O00295 520 aa15.5■□□□□ 0.07
HERC3-203ENST00000407637 AEBP1Q8IUX7 1158 aa15.5■□□□□ 0.07
HERC3-203ENST00000407637 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
HERC3-203ENST00000407637 MORC2Q9Y6X9 1032 aaPredicted RBP15.5■□□□□ 0.07
HERC3-203ENST00000407637 VGFO15240 615 aaPredicted RBP15.49■□□□□ 0.07
HERC3-203ENST00000407637 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
HERC3-203ENST00000407637 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
HERC3-203ENST00000407637 SMARCA5O60264 1052 aaPredicted RBP15.49■□□□□ 0.07
HERC3-203ENST00000407637 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
HERC3-203ENST00000407637 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
HERC3-203ENST00000407637 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
HERC3-203ENST00000407637 ADGRB2O60241 1585 aa15.48■□□□□ 0.07
HERC3-203ENST00000407637 ERVK-7P63135 1459 aa15.48■□□□□ 0.07
HERC3-203ENST00000407637 SPC24Q8NBT2 197 aa15.48■□□□□ 0.07
HERC3-203ENST00000407637 CALCOCO1Q9P1Z2 691 aa15.48■□□□□ 0.07
HERC3-203ENST00000407637 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
HERC3-203ENST00000407637 BRD1O95696 1058 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 TPRNQ4KMQ1 711 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 IQGAP3Q86VI3 1631 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 KDM4AO75164 1064 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 KRT222Q8N1A0 295 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 SYCP1Q15431 976 aa15.47■□□□□ 0.07
HERC3-203ENST00000407637 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
HERC3-203ENST00000407637 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.07
HERC3-203ENST00000407637 ABCC11Q96J66 1382 aa15.46■□□□□ 0.07
HERC3-203ENST00000407637 AP5Z1O43299 807 aa15.46■□□□□ 0.07
HERC3-203ENST00000407637 MED14O60244 1454 aa15.46■□□□□ 0.07
HERC3-203ENST00000407637 ZBTB9Q96C00 473 aa15.46■□□□□ 0.06
HERC3-203ENST00000407637 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
HERC3-203ENST00000407637 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
HERC3-203ENST00000407637 C16orf45Q96MC5 204 aaPredicted RBP15.45■□□□□ 0.06
HERC3-203ENST00000407637 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
HERC3-203ENST00000407637 MTHFSP49914 203 aa15.45■□□□□ 0.06
HERC3-203ENST00000407637 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
HERC3-203ENST00000407637 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
HERC3-203ENST00000407637 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
HERC3-203ENST00000407637 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 CCDC183Q5T5S1 534 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 PLEKHM2Q8IWE5 1019 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 SIRT2Q8IXJ6 389 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 TMX3Q96JJ7 454 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
HERC3-203ENST00000407637 TEX2Q8IWB9 1127 aa15.44■□□□□ 0.06
HERC3-203ENST00000407637 DUOX2Q9NRD8 1548 aa15.43■□□□□ 0.06
HERC3-203ENST00000407637 TTC22Q5TAA0 569 aa15.43■□□□□ 0.06
HERC3-203ENST00000407637 ATP10AO60312 1499 aa15.43■□□□□ 0.06
HERC3-203ENST00000407637 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
HERC3-203ENST00000407637 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
HERC3-203ENST00000407637 CD109Q6YHK3 1445 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 PTGS1P23219 599 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 KMT5BQ4FZB7 885 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 FEZ2Q9UHY8 353 aaPredicted RBP15.41■□□□□ 0.06
HERC3-203ENST00000407637 ADGRL1O94910 1474 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 TPM3P06753 285 aa15.41■□□□□ 0.06
HERC3-203ENST00000407637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.4■□□□□ 0.06
HERC3-203ENST00000407637 NEK4P51957 841 aa15.4■□□□□ 0.06
HERC3-203ENST00000407637 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
HERC3-203ENST00000407637 SECISBP2LQ93073 1101 aaKnown RBP15.4■□□□□ 0.06
HERC3-203ENST00000407637 TSPYL1Q9H0U9 437 aa15.4■□□□□ 0.06
HERC3-203ENST00000407637 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 TNNT1P13805 278 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
HERC3-203ENST00000407637 ZNF397Q8NF99 534 aaPredicted RBP15.39■□□□□ 0.05
HERC3-203ENST00000407637 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms