RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 AXIN2Q9Y2T1 843 aa21.94■■□□□ 1.1
GDPD3-202ENST00000406256 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
GDPD3-202ENST00000406256 PER1O15534 1290 aaPredicted RBP21.93■■□□□ 1.1
GDPD3-202ENST00000406256 EP400Q96L91 3159 aa21.93■■□□□ 1.1
GDPD3-202ENST00000406256 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
GDPD3-202ENST00000406256 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
GDPD3-202ENST00000406256 BRWD3Q6RI45 1802 aa21.92■■□□□ 1.1
GDPD3-202ENST00000406256 RXRBP28702 533 aa21.91■■□□□ 1.1
GDPD3-202ENST00000406256 GJD4Q96KN9 370 aaPredicted RBP21.91■■□□□ 1.1
GDPD3-202ENST00000406256 WNK3Q9BYP7 1800 aa21.9■■□□□ 1.1
GDPD3-202ENST00000406256 THSD7AQ9UPZ6 1657 aa21.9■■□□□ 1.1
GDPD3-202ENST00000406256 MAP3K19Q56UN5 1328 aa21.89■■□□□ 1.09
GDPD3-202ENST00000406256 SPATA31A5Q5VU36 1347 aa21.89■■□□□ 1.09
GDPD3-202ENST00000406256 SPATA31A7Q8IWB4 1347 aa21.89■■□□□ 1.09
GDPD3-202ENST00000406256 ZBTB7CA1YPR0 619 aa21.88■■□□□ 1.09
GDPD3-202ENST00000406256 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
GDPD3-202ENST00000406256 NSD2O96028 1365 aa21.87■■□□□ 1.09
GDPD3-202ENST00000406256 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
GDPD3-202ENST00000406256 LARP1Q6PKG0 1096 aaKnown RBP21.87■■□□□ 1.09
GDPD3-202ENST00000406256 STRN4Q9NRL3 753 aa21.86■■□□□ 1.09
GDPD3-202ENST00000406256 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
GDPD3-202ENST00000406256 RRS1Q15050 365 aaKnown RBP21.85■■□□□ 1.09
GDPD3-202ENST00000406256 FAM208AQ9UK61 1670 aaKnown RBP21.85■■□□□ 1.09
GDPD3-202ENST00000406256 ONECUT3O60422 494 aaPredicted RBP21.84■■□□□ 1.09
GDPD3-202ENST00000406256 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
GDPD3-202ENST00000406256 CRB1P82279 1406 aa21.84■■□□□ 1.09
GDPD3-202ENST00000406256 RTL1A6NKG5 1358 aa21.83■■□□□ 1.09
GDPD3-202ENST00000406256 IP6K1Q92551 441 aa21.83■■□□□ 1.08
GDPD3-202ENST00000406256 ERBB3P21860 1342 aa21.83■■□□□ 1.08
GDPD3-202ENST00000406256 WDR17Q8IZU2 1322 aa21.83■■□□□ 1.08
GDPD3-202ENST00000406256 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
GDPD3-202ENST00000406256 NPC1L1Q9UHC9 1359 aa21.81■■□□□ 1.08
GDPD3-202ENST00000406256 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
GDPD3-202ENST00000406256 HOXC9P31274 260 aa21.81■■□□□ 1.08
GDPD3-202ENST00000406256 PARP4Q9UKK3 1724 aaKnown RBP21.81■■□□□ 1.08
GDPD3-202ENST00000406256 CCDC9Q9Y3X0 531 aaKnown RBP21.8■■□□□ 1.08
GDPD3-202ENST00000406256 EMILIN1Q9Y6C2 1016 aa21.8■■□□□ 1.08
GDPD3-202ENST00000406256 EVA1CP58658 441 aa21.79■■□□□ 1.08
GDPD3-202ENST00000406256 KIF24Q5T7B8 1368 aa21.79■■□□□ 1.08
GDPD3-202ENST00000406256 FAM98CQ17RN3 349 aaKnown RBP21.77■■□□□ 1.08
GDPD3-202ENST00000406256 POLKQ9UBT6 870 aa21.77■■□□□ 1.08
GDPD3-202ENST00000406256 FLT4P35916 1363 aa21.77■■□□□ 1.08
GDPD3-202ENST00000406256 LRRC37A3O60309 1634 aa21.77■■□□□ 1.08
GDPD3-202ENST00000406256 ANKRD24Q8TF21 1146 aa21.76■■□□□ 1.07
GDPD3-202ENST00000406256 DISP2A7MBM2 1401 aa21.76■■□□□ 1.07
GDPD3-202ENST00000406256 INSRP06213 1382 aa21.75■■□□□ 1.07
GDPD3-202ENST00000406256 BARGINQ6ZT62 677 aa21.75■■□□□ 1.07
GDPD3-202ENST00000406256 SEPT12Q8IYM1 358 aa21.75■■□□□ 1.07
GDPD3-202ENST00000406256 AMPHP49418 695 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 HSP90AB2PQ58FF8 381 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 USP35Q9P2H5 1018 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 TNNT2P45379 298 aaPredicted RBP21.74■■□□□ 1.07
GDPD3-202ENST00000406256 TOM1L2Q6ZVM7 507 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 CARD10Q9BWT7 1032 aa21.74■■□□□ 1.07
GDPD3-202ENST00000406256 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
GDPD3-202ENST00000406256 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
GDPD3-202ENST00000406256 THRAP3Q9Y2W1 955 aaKnown RBP21.73■■□□□ 1.07
GDPD3-202ENST00000406256 NCAPD2Q15021 1401 aa21.7■■□□□ 1.07
GDPD3-202ENST00000406256 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.06
GDPD3-202ENST00000406256 CSB-PGBD3P0DP91 1061 aa21.7■■□□□ 1.06
GDPD3-202ENST00000406256 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
GDPD3-202ENST00000406256 RGPD1P0DJD0 1748 aa21.69■■□□□ 1.06
GDPD3-202ENST00000406256 NLRP2Q9NX02 1062 aa21.67■■□□□ 1.06
GDPD3-202ENST00000406256 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
GDPD3-202ENST00000406256 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
GDPD3-202ENST00000406256 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
GDPD3-202ENST00000406256 PPM1GO15355 546 aaPredicted RBP21.65■■□□□ 1.06
GDPD3-202ENST00000406256 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
GDPD3-202ENST00000406256 MEGF6O75095 1541 aa21.65■■□□□ 1.06
GDPD3-202ENST00000406256 SBF2Q86WG5 1849 aa21.64■■□□□ 1.06
GDPD3-202ENST00000406256 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.06
GDPD3-202ENST00000406256 TNS2Q63HR2 1409 aa21.63■■□□□ 1.05
GDPD3-202ENST00000406256 A0A0G2JS52 829 aa21.62■■□□□ 1.05
GDPD3-202ENST00000406256 MYT1Q01538 1121 aa21.62■■□□□ 1.05
GDPD3-202ENST00000406256 EIF4A2Q14240 407 aaKnown RBP21.62■■□□□ 1.05
GDPD3-202ENST00000406256 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
GDPD3-202ENST00000406256 CNGB1Q14028 1251 aaPredicted RBP21.61■■□□□ 1.05
GDPD3-202ENST00000406256 USHBP1Q8N6Y0 703 aa21.61■■□□□ 1.05
GDPD3-202ENST00000406256 FAM182BQ5T319 152 aa21.61■■□□□ 1.05
GDPD3-202ENST00000406256 UPF1Q92900 1129 aaKnown RBP eCLIP21.61■■□□□ 1.05
GDPD3-202ENST00000406256 CDCA7Q9BWT1 371 aaPredicted RBP21.61■■□□□ 1.05
GDPD3-202ENST00000406256 PKD1L3Q7Z443 1732 aa21.6■■□□□ 1.05
GDPD3-202ENST00000406256 ZNF316A6NFI3 1004 aaPredicted RBP21.6■■□□□ 1.05
GDPD3-202ENST00000406256 MTHFSP49914 203 aa21.6■■□□□ 1.05
GDPD3-202ENST00000406256 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
GDPD3-202ENST00000406256 OVOS2A0A0G2JMS6 1433 aa21.59■■□□□ 1.05
GDPD3-202ENST00000406256 IL2RBP14784 551 aa21.59■■□□□ 1.05
GDPD3-202ENST00000406256 EYA1Q99502 592 aa21.59■■□□□ 1.05
GDPD3-202ENST00000406256 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.04
GDPD3-202ENST00000406256 DDB1Q16531 1140 aa21.57■■□□□ 1.04
GDPD3-202ENST00000406256 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
GDPD3-202ENST00000406256 IL13P35225 146 aa21.56■■□□□ 1.04
GDPD3-202ENST00000406256 MARCH10Q8NA82 808 aaPredicted RBP21.55■■□□□ 1.04
GDPD3-202ENST00000406256 BCL9O00512 1426 aa21.54■■□□□ 1.04
GDPD3-202ENST00000406256 PDE3BQ13370 1112 aa21.52■■□□□ 1.04
GDPD3-202ENST00000406256 KDRP35968 1356 aa21.51■■□□□ 1.03
GDPD3-202ENST00000406256 EXOC5O00471 708 aa21.5■■□□□ 1.03
GDPD3-202ENST00000406256 AEBP1Q8IUX7 1158 aa21.49■■□□□ 1.03
GDPD3-202ENST00000406256 NHSQ6T4R5 1651 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms