RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 ABCC6O95255 1503 aa19.46■□□□□ 0.7
VAMP2-202ENST00000404970 PEAK1Q9H792 1746 aa19.45■□□□□ 0.7
VAMP2-202ENST00000404970 GJD4Q96KN9 370 aaPredicted RBP19.45■□□□□ 0.7
VAMP2-202ENST00000404970 KCNH5Q8NCM2 988 aa19.44■□□□□ 0.7
VAMP2-202ENST00000404970 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
VAMP2-202ENST00000404970 WNK3Q9BYP7 1800 aa19.43■□□□□ 0.7
VAMP2-202ENST00000404970 COG3Q96JB2 828 aa19.42■□□□□ 0.7
VAMP2-202ENST00000404970 STRN4Q9NRL3 753 aa19.41■□□□□ 0.7
VAMP2-202ENST00000404970 SPATA31A5Q5VU36 1347 aa19.41■□□□□ 0.7
VAMP2-202ENST00000404970 SPATA31A7Q8IWB4 1347 aa19.41■□□□□ 0.7
VAMP2-202ENST00000404970 LARP1Q6PKG0 1096 aaKnown RBP19.41■□□□□ 0.7
VAMP2-202ENST00000404970 RGPD2P0DJD1 1756 aa19.4■□□□□ 0.7
VAMP2-202ENST00000404970 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
VAMP2-202ENST00000404970 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
VAMP2-202ENST00000404970 CGNL1Q0VF96 1302 aa19.38■□□□□ 0.69
VAMP2-202ENST00000404970 MAP3K19Q56UN5 1328 aa19.38■□□□□ 0.69
VAMP2-202ENST00000404970 CCDC9Q9Y3X0 531 aaKnown RBP19.38■□□□□ 0.69
VAMP2-202ENST00000404970 EP400Q96L91 3159 aa19.38■□□□□ 0.69
VAMP2-202ENST00000404970 RRS1Q15050 365 aaKnown RBP19.36■□□□□ 0.69
VAMP2-202ENST00000404970 CRB1P82279 1406 aa19.36■□□□□ 0.69
VAMP2-202ENST00000404970 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
VAMP2-202ENST00000404970 ONECUT3O60422 494 aaPredicted RBP19.35■□□□□ 0.69
VAMP2-202ENST00000404970 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
VAMP2-202ENST00000404970 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
VAMP2-202ENST00000404970 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
VAMP2-202ENST00000404970 WDR17Q8IZU2 1322 aa19.34■□□□□ 0.69
VAMP2-202ENST00000404970 EVA1CP58658 441 aa19.34■□□□□ 0.69
VAMP2-202ENST00000404970 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
VAMP2-202ENST00000404970 LRRC37A3O60309 1634 aa19.33■□□□□ 0.68
VAMP2-202ENST00000404970 USP35Q9P2H5 1018 aa19.33■□□□□ 0.68
VAMP2-202ENST00000404970 BLMP54132 1417 aaPredicted RBP19.33■□□□□ 0.68
VAMP2-202ENST00000404970 ERBB3P21860 1342 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 HOXC9P31274 260 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 IP6K1Q92551 441 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 NSD2O96028 1365 aa19.32■□□□□ 0.68
VAMP2-202ENST00000404970 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
VAMP2-202ENST00000404970 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
VAMP2-202ENST00000404970 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
VAMP2-202ENST00000404970 DISP2A7MBM2 1401 aa19.29■□□□□ 0.68
VAMP2-202ENST00000404970 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
VAMP2-202ENST00000404970 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
VAMP2-202ENST00000404970 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
VAMP2-202ENST00000404970 TOM1L2Q6ZVM7 507 aa19.28■□□□□ 0.68
VAMP2-202ENST00000404970 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
VAMP2-202ENST00000404970 SMG6Q86US8 1419 aaKnown RBP19.27■□□□□ 0.68
VAMP2-202ENST00000404970 AMPHP49418 695 aa19.27■□□□□ 0.67
VAMP2-202ENST00000404970 FLT4P35916 1363 aa19.26■□□□□ 0.67
VAMP2-202ENST00000404970 HSP90AB2PQ58FF8 381 aa19.26■□□□□ 0.67
VAMP2-202ENST00000404970 LTV1Q96GA3 475 aaPredicted RBP19.26■□□□□ 0.67
VAMP2-202ENST00000404970 CARD10Q9BWT7 1032 aa19.26■□□□□ 0.67
VAMP2-202ENST00000404970 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
VAMP2-202ENST00000404970 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
VAMP2-202ENST00000404970 INSRP06213 1382 aa19.25■□□□□ 0.67
VAMP2-202ENST00000404970 SHANK3Q9BYB0 1731 aa19.24■□□□□ 0.67
VAMP2-202ENST00000404970 KIF24Q5T7B8 1368 aa19.24■□□□□ 0.67
VAMP2-202ENST00000404970 A0A0G2JS52 829 aa19.23■□□□□ 0.67
VAMP2-202ENST00000404970 MYT1Q01538 1121 aa19.23■□□□□ 0.67
VAMP2-202ENST00000404970 FAM182BQ5T319 152 aa19.23■□□□□ 0.67
VAMP2-202ENST00000404970 MORC1Q86VD1 984 aa19.23■□□□□ 0.67
VAMP2-202ENST00000404970 THRAP3Q9Y2W1 955 aaKnown RBP19.23■□□□□ 0.67
VAMP2-202ENST00000404970 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
VAMP2-202ENST00000404970 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
VAMP2-202ENST00000404970 NLRP2Q9NX02 1062 aa19.22■□□□□ 0.67
VAMP2-202ENST00000404970 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
VAMP2-202ENST00000404970 KRT27Q7Z3Y8 459 aa19.21■□□□□ 0.67
VAMP2-202ENST00000404970 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
VAMP2-202ENST00000404970 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
VAMP2-202ENST00000404970 MEGF6O75095 1541 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 TNS1Q9HBL0 1735 aaKnown RBP19.19■□□□□ 0.66
VAMP2-202ENST00000404970 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 NCAPD2Q15021 1401 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 SBF2Q86WG5 1849 aa19.19■□□□□ 0.66
VAMP2-202ENST00000404970 USHBP1Q8N6Y0 703 aa19.18■□□□□ 0.66
VAMP2-202ENST00000404970 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
VAMP2-202ENST00000404970 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
VAMP2-202ENST00000404970 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
VAMP2-202ENST00000404970 PKD1L3Q7Z443 1732 aa19.14■□□□□ 0.65
VAMP2-202ENST00000404970 IL2RBP14784 551 aa19.13■□□□□ 0.65
VAMP2-202ENST00000404970 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
VAMP2-202ENST00000404970 OVOS2A0A0G2JMS6 1433 aa19.13■□□□□ 0.65
VAMP2-202ENST00000404970 DDB1Q16531 1140 aa19.12■□□□□ 0.65
VAMP2-202ENST00000404970 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
VAMP2-202ENST00000404970 MTHFSP49914 203 aa19.11■□□□□ 0.65
VAMP2-202ENST00000404970 EYA1Q99502 592 aa19.11■□□□□ 0.65
VAMP2-202ENST00000404970 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
VAMP2-202ENST00000404970 PDE3BQ13370 1112 aa19.09■□□□□ 0.65
VAMP2-202ENST00000404970 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.65
VAMP2-202ENST00000404970 IGSF1Q8N6C5 1336 aa19.08■□□□□ 0.65
VAMP2-202ENST00000404970 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.64
VAMP2-202ENST00000404970 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
VAMP2-202ENST00000404970 IL13P35225 146 aa19.07■□□□□ 0.64
VAMP2-202ENST00000404970 EXOC5O00471 708 aa19.06■□□□□ 0.64
VAMP2-202ENST00000404970 PTF1AQ7RTS3 328 aa19.06■□□□□ 0.64
VAMP2-202ENST00000404970 TOGARAM1Q9Y4F4 1720 aa19.06■□□□□ 0.64
VAMP2-202ENST00000404970 PPP2R1AP30153 589 aa19.05■□□□□ 0.64
VAMP2-202ENST00000404970 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms