RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
SNRPN-204ENST00000400098 THSD7AQ9UPZ6 1657 aa12.37□□□□□ -0.43
SNRPN-204ENST00000400098 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 FYB1O15117 783 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
SNRPN-204ENST00000400098 PANK3Q9H999 370 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
SNRPN-204ENST00000400098 ABCC6O95255 1503 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 WASHC2AQ641Q2 1341 aa12.36□□□□□ -0.43
SNRPN-204ENST00000400098 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
SNRPN-204ENST00000400098 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
SNRPN-204ENST00000400098 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
SNRPN-204ENST00000400098 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
SNRPN-204ENST00000400098 COG3Q96JB2 828 aa12.34□□□□□ -0.43
SNRPN-204ENST00000400098 SPATA31A5Q5VU36 1347 aa12.34□□□□□ -0.43
SNRPN-204ENST00000400098 SPATA31A7Q8IWB4 1347 aa12.34□□□□□ -0.43
SNRPN-204ENST00000400098 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
SNRPN-204ENST00000400098 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
SNRPN-204ENST00000400098 SOCS7O14512 581 aa12.32□□□□□ -0.44
SNRPN-204ENST00000400098 SPATA31A1Q5TZJ5 1347 aa12.32□□□□□ -0.44
SNRPN-204ENST00000400098 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
SNRPN-204ENST00000400098 EVA1CP58658 441 aa12.31□□□□□ -0.44
SNRPN-204ENST00000400098 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
SNRPN-204ENST00000400098 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
SNRPN-204ENST00000400098 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
SNRPN-204ENST00000400098 CRB1P82279 1406 aa12.3□□□□□ -0.44
SNRPN-204ENST00000400098 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
SNRPN-204ENST00000400098 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
SNRPN-204ENST00000400098 SEPT12Q8IYM1 358 aa12.29□□□□□ -0.44
SNRPN-204ENST00000400098 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
SNRPN-204ENST00000400098 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
SNRPN-204ENST00000400098 A0A0G2JS52 829 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
SNRPN-204ENST00000400098 HOXC9P31274 260 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 MYT1Q01538 1121 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 IP6K1Q92551 441 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 LTV1Q96GA3 475 aaPredicted RBP12.27□□□□□ -0.45
SNRPN-204ENST00000400098 EMILIN1Q9Y6C2 1016 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 ERBB3P21860 1342 aa12.27□□□□□ -0.45
SNRPN-204ENST00000400098 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
SNRPN-204ENST00000400098 AMPHP49418 695 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 NSD2O96028 1365 aa12.26□□□□□ -0.45
SNRPN-204ENST00000400098 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
SNRPN-204ENST00000400098 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
SNRPN-204ENST00000400098 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
SNRPN-204ENST00000400098 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
SNRPN-204ENST00000400098 SBF2Q86WG5 1849 aa12.25□□□□□ -0.45
SNRPN-204ENST00000400098 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
SNRPN-204ENST00000400098 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
SNRPN-204ENST00000400098 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
SNRPN-204ENST00000400098 BARGINQ6ZT62 677 aa12.24□□□□□ -0.45
SNRPN-204ENST00000400098 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
SNRPN-204ENST00000400098 FLT4P35916 1363 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
SNRPN-204ENST00000400098 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRPN-204ENST00000400098 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
SNRPN-204ENST00000400098 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
SNRPN-204ENST00000400098 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
SNRPN-204ENST00000400098 CC2D1BQ5T0F9 858 aaKnown RBP12.22□□□□□ -0.45
SNRPN-204ENST00000400098 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
SNRPN-204ENST00000400098 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
SNRPN-204ENST00000400098 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
SNRPN-204ENST00000400098 INSRP06213 1382 aa12.21□□□□□ -0.45
SNRPN-204ENST00000400098 USHBP1Q8N6Y0 703 aa12.21□□□□□ -0.45
SNRPN-204ENST00000400098 EP400Q96L91 3159 aa12.21□□□□□ -0.46
SNRPN-204ENST00000400098 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
SNRPN-204ENST00000400098 MEGF6O75095 1541 aa12.2□□□□□ -0.46
SNRPN-204ENST00000400098 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
SNRPN-204ENST00000400098 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
SNRPN-204ENST00000400098 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
SNRPN-204ENST00000400098 PKD1L3Q7Z443 1732 aa12.18□□□□□ -0.46
SNRPN-204ENST00000400098 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
SNRPN-204ENST00000400098 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
SNRPN-204ENST00000400098 DDB1Q16531 1140 aa12.17□□□□□ -0.46
SNRPN-204ENST00000400098 NCAPD2Q15021 1401 aa12.17□□□□□ -0.46
SNRPN-204ENST00000400098 IL2RBP14784 551 aa12.16□□□□□ -0.46
SNRPN-204ENST00000400098 PDE3BQ13370 1112 aa12.16□□□□□ -0.46
SNRPN-204ENST00000400098 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
SNRPN-204ENST00000400098 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
SNRPN-204ENST00000400098 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
SNRPN-204ENST00000400098 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SNRPN-204ENST00000400098 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
SNRPN-204ENST00000400098 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
SNRPN-204ENST00000400098 OVOS2A0A0G2JMS6 1433 aa12.14□□□□□ -0.47
SNRPN-204ENST00000400098 EYA1Q99502 592 aa12.14□□□□□ -0.47
SNRPN-204ENST00000400098 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
SNRPN-204ENST00000400098 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
SNRPN-204ENST00000400098 MTHFSP49914 203 aa12.13□□□□□ -0.47
SNRPN-204ENST00000400098 BTAF1O14981 1849 aa12.13□□□□□ -0.47
SNRPN-204ENST00000400098 RREB1Q92766 1687 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms