RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
PTPRM-202ENST00000400053 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
PTPRM-202ENST00000400053 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
PTPRM-202ENST00000400053 CCP110O43303 1012 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 PIP4K2AP48426 406 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-202ENST00000400053 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
PTPRM-202ENST00000400053 ATF7IPQ6VMQ6 1270 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 LETM1O95202 739 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-202ENST00000400053 SMC2O95347 1197 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 RALGAPBQ86X10 1494 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 NOB1Q9ULX3 412 aaKnown RBP10.57□□□□□ -0.72
PTPRM-202ENST00000400053 ERC2O15083 957 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 EPS15P42566 896 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 NFXL1Q6ZNB6 911 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 ANKRD18AQ8IVF6 992 aa10.57□□□□□ -0.72
PTPRM-202ENST00000400053 RAPGEF3O95398 923 aa10.56□□□□□ -0.72
PTPRM-202ENST00000400053 CEBPZQ03701 1054 aaKnown RBP10.56□□□□□ -0.72
PTPRM-202ENST00000400053 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
PTPRM-202ENST00000400053 KINO60870 393 aaKnown RBP10.56□□□□□ -0.72
PTPRM-202ENST00000400053 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
PTPRM-202ENST00000400053 MCM2P49736 904 aa10.56□□□□□ -0.72
PTPRM-202ENST00000400053 SURF6O75683 361 aaKnown RBP10.56□□□□□ -0.72
PTPRM-202ENST00000400053 RALYLQ86SE5 291 aaKnown RBP10.56□□□□□ -0.72
PTPRM-202ENST00000400053 ATP10BO94823 1461 aa10.56□□□□□ -0.72
PTPRM-202ENST00000400053 SCAF11Q99590 1463 aaKnown RBP10.55□□□□□ -0.72
PTPRM-202ENST00000400053 RAD21O60216 631 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 ZNF692Q9BU19 519 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-202ENST00000400053 UBTFL1P0CB47 393 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-202ENST00000400053 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 C20orf194Q5TEA3 1177 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 KDM4AO75164 1064 aa10.55□□□□□ -0.72
PTPRM-202ENST00000400053 FCHSD2O94868 740 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 ERLIN2O94905 339 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 DUSP27Q5VZP5 1158 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
PTPRM-202ENST00000400053 DISP3Q9P2K9 1392 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 GOLGA6L7A0A1B0GV03 622 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 TXLNBQ8N3L3 684 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 ADGRF5Q8IZF2 1346 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 LUC7LQ9NQ29 371 aaKnown RBP10.54□□□□□ -0.72
PTPRM-202ENST00000400053 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
PTPRM-202ENST00000400053 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
PTPRM-202ENST00000400053 SYCE3A1L190 88 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 PDCP20941 246 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 EVA1CP58658 441 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 ATP2B1P20020 1258 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 XPCQ01831 940 aaPredicted RBP10.53□□□□□ -0.72
PTPRM-202ENST00000400053 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 NLRP6P59044 892 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 FILIP1LQ4L180 1135 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 WDR62O43379 1518 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 NKTRP30414 1462 aaKnown RBP10.53□□□□□ -0.72
PTPRM-202ENST00000400053 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 CLASRPQ8N2M8 674 aaKnown RBP10.53□□□□□ -0.72
PTPRM-202ENST00000400053 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
PTPRM-202ENST00000400053 ERICH4A6NGS2 130 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 GNAI3P08754 354 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 PSMA5P28066 241 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 CBX1P83916 185 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 PSME1Q06323 249 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 CNTROBQ8N137 903 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 PDCL2Q8N4E4 241 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 FSD1Q9BTV5 496 aa10.52□□□□□ -0.72
PTPRM-202ENST00000400053 ADGRL1O94910 1474 aa10.52□□□□□ -0.73
PTPRM-202ENST00000400053 EZRP15311 586 aaKnown RBP10.52□□□□□ -0.73
PTPRM-202ENST00000400053 RARSP54136 660 aaKnown RBP10.52□□□□□ -0.73
PTPRM-202ENST00000400053 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.73
PTPRM-202ENST00000400053 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
PTPRM-202ENST00000400053 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
PTPRM-202ENST00000400053 WDR33Q9C0J8 1336 aaKnown RBP10.52□□□□□ -0.73
PTPRM-202ENST00000400053 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
PTPRM-202ENST00000400053 CHD1LQ86WJ1 897 aa10.52□□□□□ -0.73
PTPRM-202ENST00000400053 TNMDQ9H2S6 317 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 AIMP1Q12904 312 aaKnown RBP10.51□□□□□ -0.73
PTPRM-202ENST00000400053 SART3Q15020 963 aaKnown RBP10.51□□□□□ -0.73
PTPRM-202ENST00000400053 WASHC4Q2M389 1173 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 AXDND1Q5T1B0 1012 aaPredicted RBP10.51□□□□□ -0.73
PTPRM-202ENST00000400053 SYCP1Q15431 976 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 SULT6B1Q6IMI4 303 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 NUP160Q12769 1436 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 PRAG1Q86YV5 1406 aa10.51□□□□□ -0.73
PTPRM-202ENST00000400053 TXLNAP40222 546 aa10.5□□□□□ -0.73
PTPRM-202ENST00000400053 BRPF1P55201 1214 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-202ENST00000400053 CCDC30Q5VVM6 783 aa10.5□□□□□ -0.73
PTPRM-202ENST00000400053 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
PTPRM-202ENST00000400053 ADAMTS12P58397 1594 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms