RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 GPS2Q13227 327 aa18.31■□□□□ 0.52
ABCC1-201ENST00000399408 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
ABCC1-201ENST00000399408 OLFM4Q6UX06 510 aa18.31■□□□□ 0.52
ABCC1-201ENST00000399408 SIL1Q9H173 461 aa18.31■□□□□ 0.52
ABCC1-201ENST00000399408 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
ABCC1-201ENST00000399408 CCDC39Q9UFE4 941 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 SRGAP3O43295 1099 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
ABCC1-201ENST00000399408 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
ABCC1-201ENST00000399408 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
ABCC1-201ENST00000399408 DDX54Q8TDD1 881 aaKnown RBP18.29■□□□□ 0.52
ABCC1-201ENST00000399408 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.526e-7■■■■□ 20
ABCC1-201ENST00000399408 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
ABCC1-201ENST00000399408 MYL6BP14649 208 aa18.29■□□□□ 0.52
ABCC1-201ENST00000399408 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
ABCC1-201ENST00000399408 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
ABCC1-201ENST00000399408 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
ABCC1-201ENST00000399408 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
ABCC1-201ENST00000399408 KINO60870 393 aaKnown RBP18.28■□□□□ 0.52
ABCC1-201ENST00000399408 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
ABCC1-201ENST00000399408 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
ABCC1-201ENST00000399408 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.52
ABCC1-201ENST00000399408 FIBPO43427 364 aa18.27■□□□□ 0.52
ABCC1-201ENST00000399408 ZNF396Q96N95 335 aaPredicted RBP18.27■□□□□ 0.52
ABCC1-201ENST00000399408 FAM135AQ9P2D6 1515 aa18.27■□□□□ 0.52
ABCC1-201ENST00000399408 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.52
ABCC1-201ENST00000399408 AACSQ86V21 672 aa18.27■□□□□ 0.51
ABCC1-201ENST00000399408 TSPY26PQ9H489 355 aa18.27■□□□□ 0.51
ABCC1-201ENST00000399408 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
ABCC1-201ENST00000399408 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
ABCC1-201ENST00000399408 SLC3A2P08195 630 aaKnown RBP18.26■□□□□ 0.51
ABCC1-201ENST00000399408 THUMPD2Q9BTF0 503 aaKnown RBP18.26■□□□□ 0.51
ABCC1-201ENST00000399408 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
ABCC1-201ENST00000399408 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
ABCC1-201ENST00000399408 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
ABCC1-201ENST00000399408 KDM4AO75164 1064 aa18.25■□□□□ 0.51
ABCC1-201ENST00000399408 WDR33Q9C0J8 1336 aaKnown RBP18.25■□□□□ 0.51
ABCC1-201ENST00000399408 SCAF11Q99590 1463 aaKnown RBP18.25■□□□□ 0.51
ABCC1-201ENST00000399408 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
ABCC1-201ENST00000399408 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
ABCC1-201ENST00000399408 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
ABCC1-201ENST00000399408 MCM10Q7L590 875 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 STK38Q15208 465 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 SSH1Q8WYL5 1049 aa18.24■□□□□ 0.51
ABCC1-201ENST00000399408 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
ABCC1-201ENST00000399408 NME9Q86XW9 330 aa18.23■□□□□ 0.51
ABCC1-201ENST00000399408 TRIM5Q9C035 493 aa18.23■□□□□ 0.51
ABCC1-201ENST00000399408 FAM13BQ9NYF5 915 aa18.23■□□□□ 0.51
ABCC1-201ENST00000399408 ATP2B1P20020 1258 aa18.23■□□□□ 0.51
ABCC1-201ENST00000399408 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
ABCC1-201ENST00000399408 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
ABCC1-201ENST00000399408 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
ABCC1-201ENST00000399408 IDI1Q13907 227 aa18.21■□□□□ 0.51
ABCC1-201ENST00000399408 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
ABCC1-201ENST00000399408 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
ABCC1-201ENST00000399408 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
ABCC1-201ENST00000399408 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
ABCC1-201ENST00000399408 STK3Q13188 491 aa18.21■□□□□ 0.51
ABCC1-201ENST00000399408 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 CEP126Q9P2H0 1117 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
ABCC1-201ENST00000399408 JMYQ8N9B5 988 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 NOS1P29475 1434 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 NSD2O96028 1365 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
ABCC1-201ENST00000399408 PDILTQ8N807 584 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
ABCC1-201ENST00000399408 CWC27Q6UX04 472 aaKnown RBP18.19■□□□□ 0.5
ABCC1-201ENST00000399408 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
ABCC1-201ENST00000399408 CEBPZQ03701 1054 aaKnown RBP18.19■□□□□ 0.5
ABCC1-201ENST00000399408 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
ABCC1-201ENST00000399408 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
ABCC1-201ENST00000399408 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
ABCC1-201ENST00000399408 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
ABCC1-201ENST00000399408 C14orf93Q9H972 538 aaKnown RBP18.19■□□□□ 0.5
ABCC1-201ENST00000399408 KRT85P78386 507 aa18.18■□□□□ 0.5
ABCC1-201ENST00000399408 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
ABCC1-201ENST00000399408 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
ABCC1-201ENST00000399408 ARGLU1Q9NWB6 273 aaPredicted RBP18.18■□□□□ 0.5
ABCC1-201ENST00000399408 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
ABCC1-201ENST00000399408 FANCAO15360 1455 aa18.18■□□□□ 0.5
ABCC1-201ENST00000399408 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
ABCC1-201ENST00000399408 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
ABCC1-201ENST00000399408 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
ABCC1-201ENST00000399408 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
ABCC1-201ENST00000399408 TXLNAP40222 546 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 KRT32Q14532 448 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms