RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 IL13P35225 146 aa28.19■■■□□ 2.1
CPNE1-204ENST00000397443 LTV1Q96GA3 475 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-204ENST00000397443 ARHGEF25Q86VW2 580 aa28.18■■■□□ 2.1
CPNE1-204ENST00000397443 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
CPNE1-204ENST00000397443 CRYBG1Q9Y4K1 1723 aa28.16■■■□□ 2.1
CPNE1-204ENST00000397443 BLMP54132 1417 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-204ENST00000397443 IP6K1Q92551 441 aa28.15■■■□□ 2.1
CPNE1-204ENST00000397443 HMOX1P09601 288 aa28.14■■■□□ 2.1
CPNE1-204ENST00000397443 CHRNA2Q15822 529 aa28.14■■■□□ 2.1
CPNE1-204ENST00000397443 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.1
CPNE1-204ENST00000397443 RTL1A6NKG5 1358 aa28.14■■■□□ 2.09
CPNE1-204ENST00000397443 KIF24Q5T7B8 1368 aa28.13■■■□□ 2.09
CPNE1-204ENST00000397443 KIAA0232Q92628 1395 aa28.13■■■□□ 2.09
CPNE1-204ENST00000397443 AXIN2Q9Y2T1 843 aa28.11■■■□□ 2.09
CPNE1-204ENST00000397443 ABCA3Q99758 1704 aa28.1■■■□□ 2.09
CPNE1-204ENST00000397443 PRDM11Q9NQV5 511 aa28.08■■■□□ 2.09
CPNE1-204ENST00000397443 APAF1O14727 1248 aa28.08■■■□□ 2.09
CPNE1-204ENST00000397443 AEBP1Q8IUX7 1158 aa28.07■■■□□ 2.08
CPNE1-204ENST00000397443 RUNDC1Q96C34 613 aa28.07■■■□□ 2.08
CPNE1-204ENST00000397443 SULT6B1Q6IMI4 303 aa28.06■■■□□ 2.08
CPNE1-204ENST00000397443 RGPD5Q99666 1765 aa28.06■■■□□ 2.08
CPNE1-204ENST00000397443 PRKAR2BP31323 418 aa28.06■■■□□ 2.08
CPNE1-204ENST00000397443 EYA1Q99502 592 aa28.06■■■□□ 2.08
CPNE1-204ENST00000397443 ANKRD24Q8TF21 1146 aa28.04■■■□□ 2.08
CPNE1-204ENST00000397443 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
CPNE1-204ENST00000397443 CPDO75976 1380 aa28.04■■■□□ 2.08
CPNE1-204ENST00000397443 FCHSD2O94868 740 aa28.04■■■□□ 2.08
CPNE1-204ENST00000397443 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
CPNE1-204ENST00000397443 RRP7AQ9Y3A4 280 aaKnown RBP28.04■■■□□ 2.08
CPNE1-204ENST00000397443 ZBED9Q6R2W3 1325 aa28.03■■■□□ 2.08
CPNE1-204ENST00000397443 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-204ENST00000397443 USHBP1Q8N6Y0 703 aa28.03■■■□□ 2.08
CPNE1-204ENST00000397443 NUTM2BA6NNL0 878 aaPredicted RBP28.02■■■□□ 2.08
CPNE1-204ENST00000397443 NUTM2EB1AL46 878 aaPredicted RBP28.02■■■□□ 2.08
CPNE1-204ENST00000397443 NUTM2AQ8IVF1 878 aaPredicted RBP28.02■■■□□ 2.08
CPNE1-204ENST00000397443 PLEKHF1Q96S99 279 aa28.02■■■□□ 2.08
CPNE1-204ENST00000397443 MAPK8IP3Q9UPT6 1336 aa28.02■■■□□ 2.08
CPNE1-204ENST00000397443 TCP11L2Q8N4U5 519 aa28.02■■■□□ 2.08
CPNE1-204ENST00000397443 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-204ENST00000397443 RGPD1P0DJD0 1748 aa28■■■□□ 2.07
CPNE1-204ENST00000397443 COL18A1P39060 1754 aa28■■■□□ 2.07
CPNE1-204ENST00000397443 HSPA1LP34931 641 aa27.99■■■□□ 2.07
CPNE1-204ENST00000397443 NBPF6Q5VWK0 638 aa27.99■■■□□ 2.07
CPNE1-204ENST00000397443 NBPF4Q96M43 638 aa27.99■■■□□ 2.07
CPNE1-204ENST00000397443 PNNQ9H307 717 aaKnown RBP27.99■■■□□ 2.07
CPNE1-204ENST00000397443 IGSF1Q8N6C5 1336 aa27.99■■■□□ 2.07
CPNE1-204ENST00000397443 RGPD2P0DJD1 1756 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 ADAMTS2O95450 1211 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 ERBB3P21860 1342 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 FAM83GA6ND36 823 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 NEFMP07197 916 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 CSB-PGBD3P0DP91 1061 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 PHACTR3Q96KR7 559 aa27.98■■■□□ 2.07
CPNE1-204ENST00000397443 NLRP2Q9NX02 1062 aa27.94■■■□□ 2.06
CPNE1-204ENST00000397443 JCADQ9P266 1359 aa27.93■■■□□ 2.06
CPNE1-204ENST00000397443 CAMTA1Q9Y6Y1 1673 aa27.93■■■□□ 2.06
CPNE1-204ENST00000397443 STRN4Q9NRL3 753 aa27.92■■■□□ 2.06
CPNE1-204ENST00000397443 TMPOP42166 694 aaKnown RBP27.9■■■□□ 2.06
CPNE1-204ENST00000397443 ABCC6O95255 1503 aa27.9■■■□□ 2.06
CPNE1-204ENST00000397443 KDRP35968 1356 aa27.9■■■□□ 2.06
CPNE1-204ENST00000397443 LMO7Q8WWI1 1683 aa27.9■■■□□ 2.06
CPNE1-204ENST00000397443 BTG4Q9NY30 223 aa27.9■■■□□ 2.06
CPNE1-204ENST00000397443 EVA1CP58658 441 aa27.88■■■□□ 2.05
CPNE1-204ENST00000397443 RIPK4P57078 832 aa27.88■■■□□ 2.05
CPNE1-204ENST00000397443 COL5A2P05997 1499 aaPredicted RBP27.87■■■□□ 2.05
CPNE1-204ENST00000397443 TOM1L2Q6ZVM7 507 aa27.86■■■□□ 2.05
CPNE1-204ENST00000397443 NFE2L2Q16236 605 aa27.85■■■□□ 2.05
CPNE1-204ENST00000397443 WWC1Q8IX03 1113 aa27.84■■■□□ 2.05
CPNE1-204ENST00000397443 CDCA7LQ96GN5 454 aa27.84■■■□□ 2.05
CPNE1-204ENST00000397443 COL14A1Q05707 1796 aaKnown RBP27.84■■■□□ 2.05
CPNE1-204ENST00000397443 WDR17Q8IZU2 1322 aa27.84■■■□□ 2.05
CPNE1-204ENST00000397443 LARP1Q6PKG0 1096 aaKnown RBP27.83■■■□□ 2.05
CPNE1-204ENST00000397443 ZNF521Q96K83 1311 aa27.81■■■□□ 2.04
CPNE1-204ENST00000397443 MTHFSDQ2M296 383 aaKnown RBP27.81■■■□□ 2.04
CPNE1-204ENST00000397443 NGEFQ8N5V2 710 aa27.8■■■□□ 2.04
CPNE1-204ENST00000397443 USP35Q9P2H5 1018 aa27.8■■■□□ 2.04
CPNE1-204ENST00000397443 TRIM35Q9UPQ4 493 aa27.8■■■□□ 2.04
CPNE1-204ENST00000397443 FAM208AQ9UK61 1670 aaKnown RBP27.8■■■□□ 2.04
CPNE1-204ENST00000397443 C8orf37Q96NL8 207 aa27.79■■■□□ 2.04
CPNE1-204ENST00000397443 GOLGA2Q08379 1002 aa27.79■■■□□ 2.04
CPNE1-204ENST00000397443 NCAPD2Q15021 1401 aa27.78■■■□□ 2.04
CPNE1-204ENST00000397443 SPATA31A6Q5VVP1 1343 aa27.78■■■□□ 2.04
CPNE1-204ENST00000397443 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
CPNE1-204ENST00000397443 PLCH1Q4KWH8 1693 aa27.77■■■□□ 2.04
CPNE1-204ENST00000397443 CCDC27Q2M243 656 aa27.77■■■□□ 2.04
CPNE1-204ENST00000397443 RAPGEF4Q8WZA2 1011 aa27.77■■■□□ 2.04
CPNE1-204ENST00000397443 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-204ENST00000397443 LRP6O75581 1613 aa27.76■■■□□ 2.03
CPNE1-204ENST00000397443 THUMPD2Q9BTF0 503 aaKnown RBP27.76■■■□□ 2.03
CPNE1-204ENST00000397443 SPINK5Q9NQ38 1064 aaPredicted RBP27.76■■■□□ 2.03
CPNE1-204ENST00000397443 PDE3BQ13370 1112 aa27.75■■■□□ 2.03
CPNE1-204ENST00000397443 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
CPNE1-204ENST00000397443 NGLY1Q96IV0 654 aa27.75■■■□□ 2.03
CPNE1-204ENST00000397443 GAS2L2Q8NHY3 880 aa27.75■■■□□ 2.03
CPNE1-204ENST00000397443 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
CPNE1-204ENST00000397443 CARD10Q9BWT7 1032 aa27.73■■■□□ 2.03
CPNE1-204ENST00000397443 TATP17735 454 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-204ENST00000397443 CRB1P82279 1406 aa27.72■■■□□ 2.03
CPNE1-204ENST00000397443 MEGF6O75095 1541 aa27.72■■■□□ 2.03
CPNE1-204ENST00000397443 PLEKHO1Q53GL0 409 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms