RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 RGS12O14924 1447 aa24.52■■□□□ 1.52
TNFSF13-204ENST00000396542 ZBTB7CA1YPR0 619 aa24.49■■□□□ 1.51
TNFSF13-204ENST00000396542 AXIN2Q9Y2T1 843 aa24.49■■□□□ 1.51
TNFSF13-204ENST00000396542 SPATA31A5Q5VU36 1347 aa24.49■■□□□ 1.51
TNFSF13-204ENST00000396542 SPATA31A7Q8IWB4 1347 aa24.49■■□□□ 1.51
TNFSF13-204ENST00000396542 STRN4Q9NRL3 753 aa24.47■■□□□ 1.51
TNFSF13-204ENST00000396542 NSD2O96028 1365 aa24.46■■□□□ 1.51
TNFSF13-204ENST00000396542 CCDC9Q9Y3X0 531 aaKnown RBP24.46■■□□□ 1.51
TNFSF13-204ENST00000396542 SPATA31A1Q5TZJ5 1347 aa24.45■■□□□ 1.5
TNFSF13-204ENST00000396542 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
TNFSF13-204ENST00000396542 EVA1CP58658 441 aa24.45■■□□□ 1.5
TNFSF13-204ENST00000396542 MAP3K19Q56UN5 1328 aa24.44■■□□□ 1.5
TNFSF13-204ENST00000396542 LARP1Q6PKG0 1096 aaKnown RBP24.44■■□□□ 1.5
TNFSF13-204ENST00000396542 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
TNFSF13-204ENST00000396542 CRB1P82279 1406 aa24.44■■□□□ 1.5
TNFSF13-204ENST00000396542 THSD7AQ9UPZ6 1657 aa24.43■■□□□ 1.5
TNFSF13-204ENST00000396542 PER1O15534 1290 aaPredicted RBP24.43■■□□□ 1.5
TNFSF13-204ENST00000396542 FBLN1P23142 703 aa24.43■■□□□ 1.5
TNFSF13-204ENST00000396542 WDR17Q8IZU2 1322 aa24.42■■□□□ 1.5
TNFSF13-204ENST00000396542 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
TNFSF13-204ENST00000396542 BRWD3Q6RI45 1802 aa24.42■■□□□ 1.5
TNFSF13-204ENST00000396542 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
TNFSF13-204ENST00000396542 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
TNFSF13-204ENST00000396542 IP6K1Q92551 441 aa24.41■■□□□ 1.5
TNFSF13-204ENST00000396542 SOCS7O14512 581 aa24.4■■□□□ 1.5
TNFSF13-204ENST00000396542 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
TNFSF13-204ENST00000396542 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
TNFSF13-204ENST00000396542 AMER1Q5JTC6 1135 aaPredicted RBP24.39■■□□□ 1.49
TNFSF13-204ENST00000396542 WNK3Q9BYP7 1800 aa24.39■■□□□ 1.49
TNFSF13-204ENST00000396542 KIF24Q5T7B8 1368 aa24.39■■□□□ 1.49
TNFSF13-204ENST00000396542 ERBB3P21860 1342 aa24.38■■□□□ 1.49
TNFSF13-204ENST00000396542 RRS1Q15050 365 aaKnown RBP24.38■■□□□ 1.49
TNFSF13-204ENST00000396542 FAM98CQ17RN3 349 aaKnown RBP24.38■■□□□ 1.49
TNFSF13-204ENST00000396542 HOXC9P31274 260 aa24.37■■□□□ 1.49
TNFSF13-204ENST00000396542 BARGINQ6ZT62 677 aa24.37■■□□□ 1.49
TNFSF13-204ENST00000396542 THRAP3Q9Y2W1 955 aaKnown RBP24.37■■□□□ 1.49
TNFSF13-204ENST00000396542 SEPT12Q8IYM1 358 aa24.36■■□□□ 1.49
TNFSF13-204ENST00000396542 AMPHP49418 695 aa24.35■■□□□ 1.49
TNFSF13-204ENST00000396542 TOM1L2Q6ZVM7 507 aa24.35■■□□□ 1.49
TNFSF13-204ENST00000396542 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
TNFSF13-204ENST00000396542 PARP4Q9UKK3 1724 aaKnown RBP24.35■■□□□ 1.49
TNFSF13-204ENST00000396542 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
TNFSF13-204ENST00000396542 ANKRD24Q8TF21 1146 aa24.34■■□□□ 1.49
TNFSF13-204ENST00000396542 CARD10Q9BWT7 1032 aa24.34■■□□□ 1.49
TNFSF13-204ENST00000396542 USP35Q9P2H5 1018 aa24.34■■□□□ 1.49
TNFSF13-204ENST00000396542 FLT4P35916 1363 aa24.33■■□□□ 1.49
TNFSF13-204ENST00000396542 CSB-PGBD3P0DP91 1061 aa24.32■■□□□ 1.48
TNFSF13-204ENST00000396542 INSRP06213 1382 aa24.31■■□□□ 1.48
TNFSF13-204ENST00000396542 SMG6Q86US8 1419 aaKnown RBP24.31■■□□□ 1.48
TNFSF13-204ENST00000396542 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
TNFSF13-204ENST00000396542 RGPD2P0DJD1 1756 aa24.3■■□□□ 1.48
TNFSF13-204ENST00000396542 MORC1Q86VD1 984 aa24.3■■□□□ 1.48
TNFSF13-204ENST00000396542 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
TNFSF13-204ENST00000396542 LRRC37A3O60309 1634 aa24.28■■□□□ 1.48
TNFSF13-204ENST00000396542 DISP2A7MBM2 1401 aa24.28■■□□□ 1.48
TNFSF13-204ENST00000396542 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
TNFSF13-204ENST00000396542 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
TNFSF13-204ENST00000396542 A0A0G2JS52 829 aa24.27■■□□□ 1.48
TNFSF13-204ENST00000396542 MYT1Q01538 1121 aa24.27■■□□□ 1.48
TNFSF13-204ENST00000396542 KRT27Q7Z3Y8 459 aa24.26■■□□□ 1.47
TNFSF13-204ENST00000396542 NLRP2Q9NX02 1062 aa24.26■■□□□ 1.47
TNFSF13-204ENST00000396542 EP400Q96L91 3159 aa24.25■■□□□ 1.47
TNFSF13-204ENST00000396542 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
TNFSF13-204ENST00000396542 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
TNFSF13-204ENST00000396542 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
TNFSF13-204ENST00000396542 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
TNFSF13-204ENST00000396542 UPF1Q92900 1129 aaKnown RBP eCLIP24.2■■□□□ 1.46
TNFSF13-204ENST00000396542 NCAPD2Q15021 1401 aa24.19■■□□□ 1.46
TNFSF13-204ENST00000396542 NBPF6Q5VWK0 638 aa24.19■■□□□ 1.46
TNFSF13-204ENST00000396542 NBPF4Q96M43 638 aa24.19■■□□□ 1.46
TNFSF13-204ENST00000396542 IL2RBP14784 551 aa24.17■■□□□ 1.46
TNFSF13-204ENST00000396542 DDB1Q16531 1140 aa24.17■■□□□ 1.46
TNFSF13-204ENST00000396542 TNS2Q63HR2 1409 aa24.17■■□□□ 1.46
TNFSF13-204ENST00000396542 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
TNFSF13-204ENST00000396542 EIF4A2Q14240 407 aaKnown RBP24.14■■□□□ 1.45
TNFSF13-204ENST00000396542 MEGF6O75095 1541 aa24.14■■□□□ 1.45
TNFSF13-204ENST00000396542 DDX10Q13206 875 aaKnown RBP24.13■■□□□ 1.45
TNFSF13-204ENST00000396542 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
TNFSF13-204ENST00000396542 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
TNFSF13-204ENST00000396542 SHANK3Q9BYB0 1731 aa24.13■■□□□ 1.45
TNFSF13-204ENST00000396542 MTHFSP49914 203 aa24.12■■□□□ 1.45
TNFSF13-204ENST00000396542 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
TNFSF13-204ENST00000396542 USHBP1Q8N6Y0 703 aa24.12■■□□□ 1.45
TNFSF13-204ENST00000396542 OVOS2A0A0G2JMS6 1433 aa24.11■■□□□ 1.45
TNFSF13-204ENST00000396542 EXOC5O00471 708 aa24.11■■□□□ 1.45
TNFSF13-204ENST00000396542 EYA1Q99502 592 aa24.11■■□□□ 1.45
TNFSF13-204ENST00000396542 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
TNFSF13-204ENST00000396542 CCDC125Q86Z20 511 aa24.1■■□□□ 1.45
TNFSF13-204ENST00000396542 SBF2Q86WG5 1849 aa24.1■■□□□ 1.45
TNFSF13-204ENST00000396542 BCL9O00512 1426 aa24.1■■□□□ 1.45
TNFSF13-204ENST00000396542 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
TNFSF13-204ENST00000396542 MARCH10Q8NA82 808 aaPredicted RBP24.09■■□□□ 1.45
TNFSF13-204ENST00000396542 TNS1Q9HBL0 1735 aaKnown RBP24.09■■□□□ 1.45
TNFSF13-204ENST00000396542 COL3A1P02461 1466 aaPredicted RBP24.08■■□□□ 1.45
TNFSF13-204ENST00000396542 PKD1L3Q7Z443 1732 aa24.08■■□□□ 1.45
TNFSF13-204ENST00000396542 IGSF1Q8N6C5 1336 aa24.08■■□□□ 1.44
TNFSF13-204ENST00000396542 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
TNFSF13-204ENST00000396542 IL13P35225 146 aa24.06■■□□□ 1.44
TNFSF13-204ENST00000396542 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
TNFSF13-204ENST00000396542 PPP2R1AP30153 589 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms