RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
CLTC-202ENST00000393043 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
CLTC-202ENST00000393043 ANKRD20A12PQ8NF67 263 aa15.18■□□□□ 0.02
CLTC-202ENST00000393043 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
CLTC-202ENST00000393043 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
CLTC-202ENST00000393043 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
CLTC-202ENST00000393043 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
CLTC-202ENST00000393043 PES1O00541 588 aaKnown RBP15.17■□□□□ 0.02
CLTC-202ENST00000393043 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
CLTC-202ENST00000393043 DNAJC2Q99543 621 aaKnown RBP15.17■□□□□ 0.02
CLTC-202ENST00000393043 K7ELQ4 463 aaPredicted RBP15.17■□□□□ 0.02
CLTC-202ENST00000393043 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
CLTC-202ENST00000393043 DUSP27Q5VZP5 1158 aa15.17■□□□□ 0.02
CLTC-202ENST00000393043 NME9Q86XW9 330 aa15.17■□□□□ 0.02
CLTC-202ENST00000393043 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
CLTC-202ENST00000393043 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 SHANK2Q9UPX8 1470 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 STRN4Q9NRL3 753 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
CLTC-202ENST00000393043 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 SART3Q15020 963 aaKnown RBP15.16■□□□□ 0.02
CLTC-202ENST00000393043 ANKRD1Q15327 319 aa15.16■□□□□ 0.02
CLTC-202ENST00000393043 NOC3LQ8WTT2 800 aaKnown RBP15.16■□□□□ 0.02
CLTC-202ENST00000393043 DHX16O60231 1041 aaKnown RBP15.15■□□□□ 0.02
CLTC-202ENST00000393043 XBP1P17861 261 aa15.15■□□□□ 0.02
CLTC-202ENST00000393043 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
CLTC-202ENST00000393043 NASPP49321 788 aaPredicted RBP15.14■□□□□ 0.01
CLTC-202ENST00000393043 PRDM11Q9NQV5 511 aa15.14■□□□□ 0.01
CLTC-202ENST00000393043 GOLGA6L1Q8N7Z2 621 aa15.14■□□□□ 0.01
CLTC-202ENST00000393043 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
CLTC-202ENST00000393043 IL16Q14005 1332 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 EMILIN1Q9Y6C2 1016 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 TTC21BQ7Z4L5 1316 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 A2MP01023 1474 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 C20orf194Q5TEA3 1177 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■□□□ 14.5
CLTC-202ENST00000393043 BRMS1Q9HCU9 246 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 AMOTL2Q9Y2J4 779 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 MCM10Q7L590 875 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 NAT10Q9H0A0 1025 aaKnown RBP15.13■□□□□ 0.01
CLTC-202ENST00000393043 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 AEBP1Q8IUX7 1158 aa15.13■□□□□ 0.01
CLTC-202ENST00000393043 TAF7Q15545 349 aaPredicted RBP15.12■□□□□ 0.01
CLTC-202ENST00000393043 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
CLTC-202ENST00000393043 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.12■□□□□ 0.01
CLTC-202ENST00000393043 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
CLTC-202ENST00000393043 TTC39AQ5SRH9 613 aa15.12■□□□□ 0.01
CLTC-202ENST00000393043 ASXL2Q76L83 1435 aa15.12■□□□□ 0.01
CLTC-202ENST00000393043 CNNM1Q9NRU3 951 aa15.12■□□□□ 0.01
CLTC-202ENST00000393043 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
CLTC-202ENST00000393043 WDR33Q9C0J8 1336 aaKnown RBP15.11■□□□□ 0.01
CLTC-202ENST00000393043 EIF2AK4Q9P2K8 1649 aaKnown RBP15.11■□□□□ 0.01
CLTC-202ENST00000393043 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
CLTC-202ENST00000393043 ARID3AQ99856 593 aa15.11■□□□□ 0.01
CLTC-202ENST00000393043 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
CLTC-202ENST00000393043 IPO7O95373 1038 aaKnown RBP15.11■□□□□ 0.01
CLTC-202ENST00000393043 MYL6BP14649 208 aa15.11■□□□□ 0.01
CLTC-202ENST00000393043 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
CLTC-202ENST00000393043 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
CLTC-202ENST00000393043 PRPF40AO75400 957 aaKnown RBP15.11■□□□□ 0.01
CLTC-202ENST00000393043 FOSBP53539 338 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 AACSQ86V21 672 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 DDX54Q8TDD1 881 aaKnown RBP15.1■□□□□ 0.01
CLTC-202ENST00000393043 PUS7Q96PZ0 661 aaKnown RBP15.1■□□□□ 0.01
CLTC-202ENST00000393043 FAM43AQ8N2R8 423 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 SIL1Q9H173 461 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 CEP89Q96ST8 783 aa15.1■□□□□ 0.01
CLTC-202ENST00000393043 GNL3LQ9NVN8 582 aaKnown RBP15.1■□□□□ 0.01
CLTC-202ENST00000393043 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
CLTC-202ENST00000393043 ZNF396Q96N95 335 aaPredicted RBP15.09■□□□□ 0.01
CLTC-202ENST00000393043 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
CLTC-202ENST00000393043 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
CLTC-202ENST00000393043 PTPRCP08575 1304 aa15.09■□□□□ 0.01
CLTC-202ENST00000393043 DCTN1Q14203 1278 aa15.09■□□□□ 0.01
CLTC-202ENST00000393043 HSP90AA2PQ14568 343 aaPredicted RBP15.09■□□□□ 0.01
CLTC-202ENST00000393043 ZSCAN25Q6NSZ9 544 aa15.09■□□□□ 0.01
CLTC-202ENST00000393043 ZSCAN31Q96LW9 406 aaPredicted RBP15.09■□□□□ 0.01
CLTC-202ENST00000393043 RAD21O60216 631 aa15.08■□□□□ 0
CLTC-202ENST00000393043 SLC3A2P08195 630 aaKnown RBP15.08■□□□□ 0
CLTC-202ENST00000393043 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
CLTC-202ENST00000393043 KINO60870 393 aaKnown RBP15.08■□□□□ 0
CLTC-202ENST00000393043 TRIM27P14373 513 aa15.08■□□□□ 0
CLTC-202ENST00000393043 FBXW7Q969H0 707 aa15.08■□□□□ 0
CLTC-202ENST00000393043 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
CLTC-202ENST00000393043 KRT32Q14532 448 aa15.07■□□□□ 0
CLTC-202ENST00000393043 OLFM4Q6UX06 510 aa15.07■□□□□ 0
CLTC-202ENST00000393043 TSPY26PQ9H489 355 aa15.07■□□□□ 0
CLTC-202ENST00000393043 IL1RAPL2Q9NP60 686 aa15.07■□□□□ 0
CLTC-202ENST00000393043 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
CLTC-202ENST00000393043 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
CLTC-202ENST00000393043 KIF21AQ7Z4S6 1674 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms