RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SH3BP5LQ7L8J4 393 aa4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 TRMT44Q8IYL2 757 aaKnown RBP4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 MAGEB6P1A0A0J9YX57 407 aa4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 ADAMTS2O95450 1211 aa4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 CTSOP43234 321 aaPredicted RBP4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 PLA2G4EQ3MJ16 856 aa4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 GIGYF2Q6Y7W6 1299 aaKnown RBP4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 ZBTB3Q9H5J0 574 aa4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 KDM2AQ9Y2K7 1162 aa4.97□□□□□ -1.61
RNU6-239P-201ENST00000390990 SENP3-EIF4A1A0A087X0R7 540 aa4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 TULP1O00294 542 aaPredicted RBP4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 CELA2BP08218 269 aaPredicted RBP4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 PLCB2Q00722 1185 aa4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 AGBL1Q96MI9 1066 aa4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 SPOCK3Q9BQ16 436 aa4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
RNU6-239P-201ENST00000390990 MSTNO14793 375 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 GAS6Q14393 721 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 AMHR2Q16671 573 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 CSPP1Q1MSJ5 1256 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 PRPF38BQ5VTL8 546 aaKnown RBP4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 RIC3Q7Z5B4 369 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 DCAF5Q96JK2 942 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 INSM2Q96T92 566 aaPredicted RBP4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 CARD14Q9BXL6 1004 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 CNTNAP5Q8WYK1 1306 aa4.95□□□□□ -1.62
RNU6-239P-201ENST00000390990 RELBQ01201 579 aa4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 SRSF11Q05519 484 aaKnown RBP4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 ERFEQ4G0M1 354 aa4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 ARMC2Q8NEN0 867 aa4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 TSC1Q92574 1164 aa4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 CUEDC1Q9NWM3 386 aaPredicted RBP4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 PGPEP1Q9NXJ5 209 aa4.94□□□□□ -1.62
RNU6-239P-201ENST00000390990 PROCP04070 461 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 MAP3K10Q02779 954 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 DIXDC1Q155Q3 683 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 QPCTQ16769 361 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 NBPF14Q5TI25 921 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 RNF217Q8TC41 542 aa4.93□□□□□ -1.62
RNU6-239P-201ENST00000390990 ZNF395Q9H8N7 513 aaPredicted RBP4.92□□□□□ -1.62
RNU6-239P-201ENST00000390990 POLMQ9NP87 494 aaPredicted RBP4.92□□□□□ -1.62
RNU6-239P-201ENST00000390990 LIMD1Q9UGP4 676 aa4.92□□□□□ -1.62
RNU6-239P-201ENST00000390990 BARGINQ6ZT62 677 aa4.91□□□□□ -1.62
RNU6-239P-201ENST00000390990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.91□□□□□ -1.62
RNU6-239P-201ENST00000390990 PARP9Q8IXQ6 854 aa4.91□□□□□ -1.62
RNU6-239P-201ENST00000390990 KCTD15Q96SI1 283 aaPredicted RBP4.91□□□□□ -1.62
RNU6-239P-201ENST00000390990 NUTM2BA6NNL0 878 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 NUTM2EB1AL46 878 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 LILRB3O75022 631 aa4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 RTL5Q5HYW3 569 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 NUTM2DQ5VT03 806 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 NUTM2AQ8IVF1 878 aaPredicted RBP4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 ENAMQ9NRM1 1142 aa4.9□□□□□ -1.63
RNU6-239P-201ENST00000390990 PHF20L1A8MW92 1017 aa4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 ZMYND10O75800 440 aa4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 INTS6LQ5JSJ4 861 aaKnown RBP4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 FOXD4L5Q5VV16 416 aaPredicted RBP4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 BEND7Q8N7W2 519 aaPredicted RBP4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 KDF1Q8NAX2 398 aaPredicted RBP4.89□□□□□ -1.63
RNU6-239P-201ENST00000390990 GPR25O00155 361 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 ADD1P35611 737 aaKnown RBP4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 DHX9Q08211 1270 aaKnown RBP4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 MYSM1Q5VVJ2 828 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 Q8N3U1 123 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 GPKOWQ92917 476 aaPredicted RBP eCLIP4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 ARHGAP9Q9BRR9 750 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 TMPRSS4Q9NRS4 437 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 IGF1RP08069 1367 aa4.88□□□□□ -1.63
RNU6-239P-201ENST00000390990 K7ELQ4 463 aaPredicted RBP4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 BCRP11274 1271 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 HAP1P54257 671 aaPredicted RBP4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 TUSC1Q2TAM9 212 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 PDXDC2PQ6P474 469 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 GALNT6Q8NCL4 622 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 NEDD1Q8NHV4 660 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 ACDQ96AP0 544 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 SLC10A4Q96EP9 437 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 OCSTAMPQ9BR26 566 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 MBIPQ9NS73 344 aa4.87□□□□□ -1.63
RNU6-239P-201ENST00000390990 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 LILRA1O75019 489 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 RHOQP17081 205 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 CTDSPL2Q05D32 466 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 DBN1Q16643 649 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 LYSMD3Q7Z3D4 306 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 PRICKLE2Q7Z3G6 844 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 ZNF784Q8NCA9 323 aaPredicted RBP4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 HELBQ8NG08 1087 aaPredicted RBP4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 ZNF837Q96EG3 531 aaPredicted RBP4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 PSMG3-AS1Q96PY0 264 aa4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 CDV3Q9UKY7 258 aaKnown RBP4.86□□□□□ -1.63
RNU6-239P-201ENST00000390990 KRBA1A5PL33 1030 aa4.85□□□□□ -1.63
RNU6-239P-201ENST00000390990 ADH1AP07327 375 aa4.85□□□□□ -1.63
RNU6-239P-201ENST00000390990 PTGIRP43119 386 aa4.85□□□□□ -1.63
RNU6-239P-201ENST00000390990 PODNQ7Z5L7 613 aa4.85□□□□□ -1.63
RNU6-239P-201ENST00000390990 TRIM66O15016 1216 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 FURINP09958 794 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 BAG6P46379 1132 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms