RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ARHGAP9Q9BRR9 750 aa6.67□□□□□ -1.34
RNU6-1040P-201ENST00000383974 ATP1B4Q9UN42 357 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1040P-201ENST00000383974 EMILIN1Q9Y6C2 1016 aa6.67□□□□□ -1.34
RNU6-1040P-201ENST00000383974 PPP2R2DQ66LE6 453 aa6.66□□□□□ -1.34
RNU6-1040P-201ENST00000383974 BCANQ96GW7 911 aa6.66□□□□□ -1.34
RNU6-1040P-201ENST00000383974 AP1G2O75843 785 aa6.65□□□□□ -1.34
RNU6-1040P-201ENST00000383974 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
RNU6-1040P-201ENST00000383974 SLC10A4Q96EP9 437 aa6.65□□□□□ -1.34
RNU6-1040P-201ENST00000383974 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.34
RNU6-1040P-201ENST00000383974 VSIG8P0DPA2 414 aa6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 PPP1R26Q5T8A7 1209 aaPredicted RBP6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 KCTD15Q96SI1 283 aaPredicted RBP6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 OCSTAMPQ9BR26 566 aa6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 HMX1Q9NP08 348 aaPredicted RBP6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 SOS2Q07890 1332 aaPredicted RBP6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 ZC3H4Q9UPT8 1303 aaKnown RBP6.64□□□□□ -1.35
RNU6-1040P-201ENST00000383974 CBLBQ13191 982 aa6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 ZBTB33Q86T24 672 aa6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 ZSCAN1Q8NBB4 408 aa6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 TSEN34Q9BSV6 310 aaKnown RBP6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
RNU6-1040P-201ENST00000383974 USP17L8P0C7I0 530 aa6.62□□□□□ -1.35
RNU6-1040P-201ENST00000383974 CDV3Q9UKY7 258 aaKnown RBP6.62□□□□□ -1.35
RNU6-1040P-201ENST00000383974 PPFIA3O75145 1194 aa6.61□□□□□ -1.35
RNU6-1040P-201ENST00000383974 PTK2Q05397 1052 aa6.61□□□□□ -1.35
RNU6-1040P-201ENST00000383974 INTS6LQ5JSJ4 861 aaKnown RBP6.61□□□□□ -1.35
RNU6-1040P-201ENST00000383974 Q6ZVU0 165 aa6.61□□□□□ -1.35
RNU6-1040P-201ENST00000383974 ADAM32Q8TC27 787 aa6.61□□□□□ -1.35
RNU6-1040P-201ENST00000383974 FAM181BA6NEQ2 426 aa6.6□□□□□ -1.35
RNU6-1040P-201ENST00000383974 TTLL8A6PVC2 850 aa6.6□□□□□ -1.35
RNU6-1040P-201ENST00000383974 RFC5P40937 340 aa6.6□□□□□ -1.35
RNU6-1040P-201ENST00000383974 GPSM3Q9Y4H4 160 aa6.6□□□□□ -1.35
RNU6-1040P-201ENST00000383974 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
RNU6-1040P-201ENST00000383974 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.59□□□□□ -1.35
RNU6-1040P-201ENST00000383974 SPINT1O43278 529 aa6.58□□□□□ -1.36
RNU6-1040P-201ENST00000383974 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
RNU6-1040P-201ENST00000383974 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
RNU6-1040P-201ENST00000383974 AGBL1Q96MI9 1066 aa6.58□□□□□ -1.36
RNU6-1040P-201ENST00000383974 FIGNL2A6NMB9 653 aa6.57□□□□□ -1.36
RNU6-1040P-201ENST00000383974 RAB15P59190 212 aa6.57□□□□□ -1.36
RNU6-1040P-201ENST00000383974 PTSQ03393 145 aa6.57□□□□□ -1.36
RNU6-1040P-201ENST00000383974 TMPRSS4Q9NRS4 437 aa6.57□□□□□ -1.36
RNU6-1040P-201ENST00000383974 RELBQ01201 579 aa6.56□□□□□ -1.36
RNU6-1040P-201ENST00000383974 ZNF784Q8NCA9 323 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1040P-201ENST00000383974 TRIM34Q9BYJ4 488 aa6.56□□□□□ -1.36
RNU6-1040P-201ENST00000383974 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1040P-201ENST00000383974 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1040P-201ENST00000383974 GOPCQ9HD26 462 aa6.55□□□□□ -1.36
RNU6-1040P-201ENST00000383974 SLC24A1O60721 1099 aa6.54□□□□□ -1.36
RNU6-1040P-201ENST00000383974 KRT76Q01546 638 aa6.54□□□□□ -1.36
RNU6-1040P-201ENST00000383974 DZIP3Q86Y13 1208 aaKnown RBP6.54□□□□□ -1.36
RNU6-1040P-201ENST00000383974 CCDC155Q8N6L0 562 aa6.54□□□□□ -1.36
RNU6-1040P-201ENST00000383974 PCMTD1Q96MG8 357 aaPredicted RBP6.54□□□□□ -1.36
RNU6-1040P-201ENST00000383974 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 LILRA1O75019 489 aa6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 GPR161Q8N6U8 529 aaKnown RBP6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 ZNF395Q9H8N7 513 aaPredicted RBP6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 POLMQ9NP87 494 aaPredicted RBP6.53□□□□□ -1.36
RNU6-1040P-201ENST00000383974 ESPNB1AK53 854 aa6.52□□□□□ -1.37
RNU6-1040P-201ENST00000383974 ADH1AP07327 375 aa6.52□□□□□ -1.37
RNU6-1040P-201ENST00000383974 RNF217Q8TC41 542 aa6.52□□□□□ -1.37
RNU6-1040P-201ENST00000383974 SLC35F4A4IF30 521 aa6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 TMEM259Q4ZIN3 620 aa6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 NANOS1Q8WY41 292 aaKnown RBP6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 GJD4Q96KN9 370 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 CYLDQ9NQC7 956 aa6.51□□□□□ -1.37
RNU6-1040P-201ENST00000383974 ZBBXA8MT70 800 aa6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 FBXO45P0C2W1 286 aa6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 ADD1P35611 737 aaKnown RBP6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 FOXD4L5Q5VV16 416 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 CNTNAP3BQ96NU0 1288 aa6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 CNTNAP3Q9BZ76 1288 aa6.5□□□□□ -1.37
RNU6-1040P-201ENST00000383974 ITGA6P23229 1130 aa6.49□□□□□ -1.37
RNU6-1040P-201ENST00000383974 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
RNU6-1040P-201ENST00000383974 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
RNU6-1040P-201ENST00000383974 COL25A1Q9BXS0 654 aaPredicted RBP6.49□□□□□ -1.37
RNU6-1040P-201ENST00000383974 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
RNU6-1040P-201ENST00000383974 SENP3-EIF4A1A0A087X0R7 540 aa6.48□□□□□ -1.37
RNU6-1040P-201ENST00000383974 CDC14CA4D256 554 aa6.48□□□□□ -1.37
RNU6-1040P-201ENST00000383974 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
RNU6-1040P-201ENST00000383974 PTGIRP43119 386 aa6.48□□□□□ -1.37
RNU6-1040P-201ENST00000383974 BRPF1P55201 1214 aaPredicted RBP6.47□□□□□ -1.37
RNU6-1040P-201ENST00000383974 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
RNU6-1040P-201ENST00000383974 GPR37L1O60883 481 aa6.45□□□□□ -1.38
RNU6-1040P-201ENST00000383974 SV2AQ7L0J3 742 aa6.45□□□□□ -1.38
RNU6-1040P-201ENST00000383974 LYSMD3Q7Z3D4 306 aa6.45□□□□□ -1.38
RNU6-1040P-201ENST00000383974 ATP5J2-PTCD1G3V325 749 aa6.44□□□□□ -1.38
RNU6-1040P-201ENST00000383974 MTMR14Q8NCE2 650 aa6.44□□□□□ -1.38
RNU6-1040P-201ENST00000383974 RHOQP17081 205 aa6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 RNF144AP50876 292 aaPredicted RBP6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 NR1H3Q13133 447 aa6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 ZNF385CQ66K41 422 aaPredicted RBP6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 CC2D2BQ6DHV5 1058 aa6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 PRICKLE2Q7Z3G6 844 aa6.43□□□□□ -1.38
RNU6-1040P-201ENST00000383974 TRIM52Q96A61 297 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms