RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 PPM1GO15355 546 aaPredicted RBP25.84■■□□□ 1.73
SPSB1-203ENST00000377399 FBLN1P23142 703 aa25.84■■□□□ 1.73
SPSB1-203ENST00000377399 SMG6Q86US8 1419 aaKnown RBP25.84■■□□□ 1.73
SPSB1-203ENST00000377399 MTHFSP49914 203 aa25.83■■□□□ 1.73
SPSB1-203ENST00000377399 POLKQ9UBT6 870 aa25.83■■□□□ 1.73
SPSB1-203ENST00000377399 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.73
SPSB1-203ENST00000377399 BCL9LQ86UU0 1499 aa25.83■■□□□ 1.73
SPSB1-203ENST00000377399 MAP3K19Q56UN5 1328 aa25.83■■□□□ 1.73
SPSB1-203ENST00000377399 AMPHP49418 695 aa25.82■■□□□ 1.72
SPSB1-203ENST00000377399 CFAP53Q96M91 514 aa25.82■■□□□ 1.72
SPSB1-203ENST00000377399 CCER2I3L3R5 266 aa25.81■■□□□ 1.72
SPSB1-203ENST00000377399 RTL1A6NKG5 1358 aa25.81■■□□□ 1.72
SPSB1-203ENST00000377399 KIF24Q5T7B8 1368 aa25.81■■□□□ 1.72
SPSB1-203ENST00000377399 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
SPSB1-203ENST00000377399 FLT4P35916 1363 aa25.8■■□□□ 1.72
SPSB1-203ENST00000377399 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
SPSB1-203ENST00000377399 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
SPSB1-203ENST00000377399 CPDO75976 1380 aa25.79■■□□□ 1.72
SPSB1-203ENST00000377399 ARHGEF25Q86VW2 580 aa25.78■■□□□ 1.72
SPSB1-203ENST00000377399 KIAA0232Q92628 1395 aa25.78■■□□□ 1.72
SPSB1-203ENST00000377399 PEAK1Q9H792 1746 aa25.77■■□□□ 1.72
SPSB1-203ENST00000377399 PRDM11Q9NQV5 511 aa25.77■■□□□ 1.72
SPSB1-203ENST00000377399 UNC5CLQ8IV45 518 aa25.76■■□□□ 1.71
SPSB1-203ENST00000377399 ABCC6O95255 1503 aa25.76■■□□□ 1.71
SPSB1-203ENST00000377399 CCDC125Q86Z20 511 aa25.75■■□□□ 1.71
SPSB1-203ENST00000377399 HOXC9P31274 260 aa25.74■■□□□ 1.71
SPSB1-203ENST00000377399 IP6K1Q92551 441 aa25.73■■□□□ 1.71
SPSB1-203ENST00000377399 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.72■■□□□ 1.71
SPSB1-203ENST00000377399 SLIT2O94813 1529 aa25.72■■□□□ 1.71
SPSB1-203ENST00000377399 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
SPSB1-203ENST00000377399 INSRP06213 1382 aa25.71■■□□□ 1.71
SPSB1-203ENST00000377399 CHRNA2Q15822 529 aa25.71■■□□□ 1.71
SPSB1-203ENST00000377399 COL3A1P02461 1466 aaPredicted RBP25.71■■□□□ 1.71
SPSB1-203ENST00000377399 COL14A1Q05707 1796 aaKnown RBP25.7■■□□□ 1.7
SPSB1-203ENST00000377399 CCDC184Q52MB2 194 aa25.7■■□□□ 1.7
SPSB1-203ENST00000377399 DIAPH1O60610 1272 aaKnown RBP25.69■■□□□ 1.7
SPSB1-203ENST00000377399 HSP90AB2PQ58FF8 381 aa25.69■■□□□ 1.7
SPSB1-203ENST00000377399 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
SPSB1-203ENST00000377399 COL18A1P39060 1754 aa25.68■■□□□ 1.7
SPSB1-203ENST00000377399 LMO7Q8WWI1 1683 aa25.67■■□□□ 1.7
SPSB1-203ENST00000377399 WDR43Q15061 677 aaKnown RBP eCLIP25.66■■□□□ 1.7
SPSB1-203ENST00000377399 RGPD5Q99666 1765 aa25.65■■□□□ 1.7
SPSB1-203ENST00000377399 LTV1Q96GA3 475 aaPredicted RBP25.65■■□□□ 1.7
SPSB1-203ENST00000377399 FAM83GA6ND36 823 aa25.64■■□□□ 1.7
SPSB1-203ENST00000377399 EIF4A2Q14240 407 aaKnown RBP25.64■■□□□ 1.7
SPSB1-203ENST00000377399 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.69
SPSB1-203ENST00000377399 VPS72Q15906 364 aa25.63■■□□□ 1.69
SPSB1-203ENST00000377399 GLI3P10071 1580 aa25.63■■□□□ 1.69
SPSB1-203ENST00000377399 U2SURPO15042 1029 aaKnown RBP25.62■■□□□ 1.69
SPSB1-203ENST00000377399 ANKRD24Q8TF21 1146 aa25.62■■□□□ 1.69
SPSB1-203ENST00000377399 AXIN2Q9Y2T1 843 aa25.62■■□□□ 1.69
SPSB1-203ENST00000377399 CSB-PGBD3P0DP91 1061 aa25.61■■□□□ 1.69
SPSB1-203ENST00000377399 CAMTA1Q9Y6Y1 1673 aa25.61■■□□□ 1.69
SPSB1-203ENST00000377399 ERBB3P21860 1342 aa25.61■■□□□ 1.69
SPSB1-203ENST00000377399 IL13P35225 146 aa25.6■■□□□ 1.69
SPSB1-203ENST00000377399 FAM208AQ9UK61 1670 aaKnown RBP25.6■■□□□ 1.69
SPSB1-203ENST00000377399 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
SPSB1-203ENST00000377399 EP400Q96L91 3159 aa25.59■■□□□ 1.69
SPSB1-203ENST00000377399 BTG4Q9NY30 223 aa25.59■■□□□ 1.69
SPSB1-203ENST00000377399 CCDC9Q9Y3X0 531 aaKnown RBP25.59■■□□□ 1.69
SPSB1-203ENST00000377399 NWD2Q9ULI1 1742 aa25.59■■□□□ 1.69
SPSB1-203ENST00000377399 EVA1CP58658 441 aa25.58■■□□□ 1.69
SPSB1-203ENST00000377399 SEPT12Q8IYM1 358 aa25.58■■□□□ 1.69
SPSB1-203ENST00000377399 FAM9BQ8IZU0 186 aa25.58■■□□□ 1.69
SPSB1-203ENST00000377399 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.69
SPSB1-203ENST00000377399 ONECUT3O60422 494 aaPredicted RBP25.57■■□□□ 1.68
SPSB1-203ENST00000377399 U2AF1L5P0DN76 240 aaPredicted RBP25.57■■□□□ 1.68
SPSB1-203ENST00000377399 U2AF1Q01081 240 aaKnown RBP eCLIP25.57■■□□□ 1.68
SPSB1-203ENST00000377399 STRN4Q9NRL3 753 aa25.57■■□□□ 1.68
SPSB1-203ENST00000377399 RGPD1P0DJD0 1748 aa25.55■■□□□ 1.68
SPSB1-203ENST00000377399 WDR17Q8IZU2 1322 aa25.55■■□□□ 1.68
SPSB1-203ENST00000377399 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
SPSB1-203ENST00000377399 SF3B2Q13435 895 aaKnown RBP25.53■■□□□ 1.68
SPSB1-203ENST00000377399 NLRP2Q9NX02 1062 aa25.53■■□□□ 1.68
SPSB1-203ENST00000377399 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
SPSB1-203ENST00000377399 RGPD2P0DJD1 1756 aa25.52■■□□□ 1.68
SPSB1-203ENST00000377399 TOM1L2Q6ZVM7 507 aa25.52■■□□□ 1.68
SPSB1-203ENST00000377399 EYA1Q99502 592 aa25.52■■□□□ 1.68
SPSB1-203ENST00000377399 ADAMTS8Q9UP79 889 aa25.51■■□□□ 1.67
SPSB1-203ENST00000377399 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
SPSB1-203ENST00000377399 KRT27Q7Z3Y8 459 aa25.5■■□□□ 1.67
SPSB1-203ENST00000377399 CRB1P82279 1406 aa25.49■■□□□ 1.67
SPSB1-203ENST00000377399 HMOX1P09601 288 aa25.49■■□□□ 1.67
SPSB1-203ENST00000377399 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
SPSB1-203ENST00000377399 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
SPSB1-203ENST00000377399 PNNQ9H307 717 aaKnown RBP25.49■■□□□ 1.67
SPSB1-203ENST00000377399 SULT6B1Q6IMI4 303 aa25.48■■□□□ 1.67
SPSB1-203ENST00000377399 LARP1Q6PKG0 1096 aaKnown RBP25.48■■□□□ 1.67
SPSB1-203ENST00000377399 USHBP1Q8N6Y0 703 aa25.48■■□□□ 1.67
SPSB1-203ENST00000377399 A0A0G2JS52 829 aa25.46■■□□□ 1.67
SPSB1-203ENST00000377399 FCHSD2O94868 740 aa25.46■■□□□ 1.67
SPSB1-203ENST00000377399 NEFMP07197 916 aa25.46■■□□□ 1.67
SPSB1-203ENST00000377399 MYT1Q01538 1121 aa25.46■■□□□ 1.67
SPSB1-203ENST00000377399 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
SPSB1-203ENST00000377399 KDRP35968 1356 aa25.45■■□□□ 1.67
SPSB1-203ENST00000377399 AEBP1Q8IUX7 1158 aa25.45■■□□□ 1.66
SPSB1-203ENST00000377399 CARD10Q9BWT7 1032 aa25.45■■□□□ 1.66
SPSB1-203ENST00000377399 SRCAPQ6ZRS2 3230 aa25.45■■□□□ 1.66
SPSB1-203ENST00000377399 DEFB132Q7Z7B7 95 aa25.44■■□□□ 1.66
SPSB1-203ENST00000377399 RSPH6AQ9H0K4 717 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms