RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCDC6Q16204 474 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 TNMDQ9H2S6 317 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 RSPH14Q9UHP6 348 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 SCAND2PQ9GZW5 306 aaPredicted RBP7.76□□□□□ -1.17
UBR4-204ENST00000375254 SKILP12757 684 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 SPC24Q8NBT2 197 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 IFT74Q96LB3 600 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 NAA25Q14CX7 972 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 MAGEC2Q9UBF1 373 aaPredicted RBP7.76□□□□□ -1.17
UBR4-204ENST00000375254 LUC7L2Q9Y383 392 aaKnown RBP7.76□□□□□ -1.17
UBR4-204ENST00000375254 MTUS2Q5JR59 1369 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 HSP90AB2PQ58FF8 381 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 MSL1Q68DK7 614 aa7.76□□□□□ -1.17
UBR4-204ENST00000375254 STAMBPO95630 424 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 MAP7Q14244 749 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 FOXD4L5Q5VV16 416 aaPredicted RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 DZIP1LQ8IYY4 767 aaKnown RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 DNAJC8O75937 253 aaPredicted RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 ANO10Q9NW15 660 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 ARFGAP2Q8N6H7 521 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 GCC1Q96CN9 775 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 API5Q9BZZ5 524 aaKnown RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 TAOK3Q9H2K8 898 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 WHAMMP3Q1A5X7 153 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 CLUAP1Q96AJ1 413 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 NBPF8Q3BBV2 869 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 GBP7Q8N8V2 638 aaPredicted RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 STIM2Q9P246 746 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 SATB2Q9UPW6 733 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 MAP3K11Q16584 847 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 ZSCAN31Q96LW9 406 aaPredicted RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 RPUSD2Q8IZ73 545 aaKnown RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 SYCP1Q15431 976 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 ARHGAP29Q52LW3 1261 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 TACC1O75410 805 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 STAC3Q96MF2 364 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 UIMC1Q96RL1 719 aa7.75□□□□□ -1.17
UBR4-204ENST00000375254 LRRFIP2Q9Y608 721 aaKnown RBP7.75□□□□□ -1.17
UBR4-204ENST00000375254 CCDC114Q96M63 670 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 PAFAH1B1P43034 410 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 TTC14Q96N46 770 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 SLMAPQ14BN4 828 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 EPB41L2O43491 1005 aaKnown RBP7.74□□□□□ -1.17
UBR4-204ENST00000375254 ATP8B1O43520 1251 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 PPFIA2O75334 1257 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 URI1O94763 535 aaPredicted RBP7.74□□□□□ -1.17
UBR4-204ENST00000375254 UPF3BQ9BZI7 483 aaKnown RBP7.74□□□□□ -1.17
UBR4-204ENST00000375254 U2AF1L5P0DN76 240 aaPredicted RBP7.74□□□□□ -1.17
UBR4-204ENST00000375254 U2AF1Q01081 240 aaKnown RBP eCLIP7.74□□□□□ -1.173e-8■■■■□ 20.2
UBR4-204ENST00000375254 XPCQ01831 940 aaPredicted RBP7.74□□□□□ -1.17
UBR4-204ENST00000375254 MYRIPQ8NFW9 859 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 KRT85P78386 507 aa7.74□□□□□ -1.17
UBR4-204ENST00000375254 ERC2O15083 957 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 ATP11AP98196 1134 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 VEZTQ9HBM0 779 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 ADCY5O95622 1261 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 CHGAP10645 457 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 CCDC30Q5VVM6 783 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 NBPF11Q86T75 865 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 HSF2BPO75031 334 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 RRP7BPQ9NSQ0 103 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 AIMP1Q12904 312 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 NEBLO76041 1014 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 KIF4BQ2VIQ3 1234 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 TOMM22Q9NS69 142 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 LARSQ9P2J5 1176 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 CCDC150Q8NCX0 1101 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 PSMD7P51665 324 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 CCDC158Q5M9N0 1113 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 BUB1BO60566 1050 aaPredicted RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 BAG4O95429 457 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 INPP5BP32019 993 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 CLNS1AP54105 237 aaKnown RBP7.73□□□□□ -1.17
UBR4-204ENST00000375254 XBP1P17861 261 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 STIM1Q13586 685 aa7.73□□□□□ -1.17
UBR4-204ENST00000375254 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 NUCKS1Q9H1E3 243 aaKnown RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 CCNB3Q8WWL7 1395 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 CKAP4Q07065 602 aaKnown RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 TAF4BQ92750 862 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 ZBTB12Q9Y330 459 aaPredicted RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 CLIP1P30622 1438 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 KRBA2Q6ZNG9 492 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 USO1O60763 962 aaKnown RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 NEK4P51957 841 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 NLRP5P59047 1200 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 IFFO1Q0D2I5 559 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 PPFIBP2Q8ND30 876 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 ANKRD30AQ9BXX3 1397 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 NUP62CLQ9H1M0 184 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 ITGB1BP2Q9UKP3 347 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 CEP162Q5TB80 1403 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 LACTBP83111 547 aaPredicted RBP7.72□□□□□ -1.17
UBR4-204ENST00000375254 MARCH6O60337 910 aa7.72□□□□□ -1.17
UBR4-204ENST00000375254 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms