RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 IL16Q14005 1332 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 CABP4P57796 275 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
NUP188-201ENST00000372577 A2MP01023 1474 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
NUP188-201ENST00000372577 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
NUP188-201ENST00000372577 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 DISP3Q9P2K9 1392 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 NEK4P51957 841 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
NUP188-201ENST00000372577 XBP1P17861 261 aa12.6□□□□□ -0.39
NUP188-201ENST00000372577 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
NUP188-201ENST00000372577 SART3Q15020 963 aaKnown RBP12.59□□□□□ -0.39
NUP188-201ENST00000372577 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
NUP188-201ENST00000372577 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
NUP188-201ENST00000372577 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
NUP188-201ENST00000372577 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
NUP188-201ENST00000372577 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
NUP188-201ENST00000372577 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.39
NUP188-201ENST00000372577 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
NUP188-201ENST00000372577 TRAK2O60296 914 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
NUP188-201ENST00000372577 GOLGA6L1Q8N7Z2 621 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.4
NUP188-201ENST00000372577 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 WAPLQ7Z5K2 1190 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
NUP188-201ENST00000372577 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
NUP188-201ENST00000372577 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.47e-7■■■■□ 24.2
NUP188-201ENST00000372577 RAB11FIP3O75154 756 aa12.57□□□□□ -0.4
NUP188-201ENST00000372577 CREBRFQ8IUR6 639 aa12.57□□□□□ -0.4
NUP188-201ENST00000372577 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
NUP188-201ENST00000372577 CYP46A1Q9Y6A2 500 aa12.57□□□□□ -0.4
NUP188-201ENST00000372577 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
NUP188-201ENST00000372577 DUSP27Q5VZP5 1158 aa12.56□□□□□ -0.4
NUP188-201ENST00000372577 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
NUP188-201ENST00000372577 ZSCAN25Q6NSZ9 544 aa12.56□□□□□ -0.4
NUP188-201ENST00000372577 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
NUP188-201ENST00000372577 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
NUP188-201ENST00000372577 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
NUP188-201ENST00000372577 PTPRCP08575 1304 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
NUP188-201ENST00000372577 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
NUP188-201ENST00000372577 PES1O00541 588 aaKnown RBP12.54□□□□□ -0.4
NUP188-201ENST00000372577 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
NUP188-201ENST00000372577 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
NUP188-201ENST00000372577 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
NUP188-201ENST00000372577 KRT32Q14532 448 aa12.54□□□□□ -0.4
NUP188-201ENST00000372577 NME9Q86XW9 330 aa12.54□□□□□ -0.4
NUP188-201ENST00000372577 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
NUP188-201ENST00000372577 MSH5O43196 834 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 CCDC70Q6NSX1 233 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 CEP89Q96ST8 783 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
NUP188-201ENST00000372577 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 TNRQ92752 1358 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
NUP188-201ENST00000372577 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
NUP188-201ENST00000372577 CNNM1Q9NRU3 951 aa12.53□□□□□ -0.4
NUP188-201ENST00000372577 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.4
NUP188-201ENST00000372577 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
NUP188-201ENST00000372577 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
NUP188-201ENST00000372577 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
NUP188-201ENST00000372577 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
NUP188-201ENST00000372577 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
NUP188-201ENST00000372577 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
NUP188-201ENST00000372577 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 TRAPPC8Q9Y2L5 1435 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 GPS2Q13227 327 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 AACSQ86V21 672 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
NUP188-201ENST00000372577 UHRF1BP1LA0JNW5 1464 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms