RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PRM3Q9NNZ6 103 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 BECN2A8MW95 431 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 A0A087WZG4 1122 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 CDC45O75419 566 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
SCAF11-202ENST00000369367 ZNF287Q9HBT7 754 aa11.86□□□□□ -0.51
SCAF11-202ENST00000369367 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
SCAF11-202ENST00000369367 SMC3Q9UQE7 1217 aa11.85□□□□□ -0.51
SCAF11-202ENST00000369367 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
SCAF11-202ENST00000369367 ABCC11Q96J66 1382 aa11.85□□□□□ -0.51
SCAF11-202ENST00000369367 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
SCAF11-202ENST00000369367 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
SCAF11-202ENST00000369367 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
SCAF11-202ENST00000369367 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-202ENST00000369367 MYL6BP14649 208 aa11.84□□□□□ -0.51
SCAF11-202ENST00000369367 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
SCAF11-202ENST00000369367 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
SCAF11-202ENST00000369367 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
SCAF11-202ENST00000369367 MCM2P49736 904 aa11.84□□□□□ -0.51
SCAF11-202ENST00000369367 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
SCAF11-202ENST00000369367 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-202ENST00000369367 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-202ENST00000369367 ATP10BO94823 1461 aa11.83□□□□□ -0.52
SCAF11-202ENST00000369367 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
SCAF11-202ENST00000369367 PDCP20941 246 aa11.82□□□□□ -0.52
SCAF11-202ENST00000369367 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
SCAF11-202ENST00000369367 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
SCAF11-202ENST00000369367 NUCB2P80303 420 aa11.82□□□□□ -0.52
SCAF11-202ENST00000369367 IFNL2Q8IZJ0 200 aa11.82□□□□□ -0.52
SCAF11-202ENST00000369367 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-202ENST00000369367 CTNNA3Q9UI47 895 aa11.82□□□□□ -0.52
SCAF11-202ENST00000369367 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
SCAF11-202ENST00000369367 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
SCAF11-202ENST00000369367 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
SCAF11-202ENST00000369367 AK7Q96M32 723 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 NBPF8Q3BBV2 869 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 CCDC73Q6ZRK6 1079 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 NOS1P29475 1434 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
SCAF11-202ENST00000369367 TXLNAP40222 546 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 LRRCC1Q9C099 1032 aa11.81□□□□□ -0.52
SCAF11-202ENST00000369367 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-202ENST00000369367 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
SCAF11-202ENST00000369367 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 HYPKQ9NX55 129 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 ABCC2Q92887 1545 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
SCAF11-202ENST00000369367 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
SCAF11-202ENST00000369367 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-202ENST00000369367 CCDC70Q6NSX1 233 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 LRRC59Q96AG4 307 aaKnown RBP11.79□□□□□ -0.52
SCAF11-202ENST00000369367 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-202ENST00000369367 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-202ENST00000369367 PDE4AP27815 886 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
SCAF11-202ENST00000369367 WDR62O43379 1518 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
SCAF11-202ENST00000369367 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-202ENST00000369367 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 RIMS2Q9UQ26 1411 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 UHRF1BP1Q6BDS2 1440 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 A0A0U1RQG5 324 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-202ENST00000369367 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
SCAF11-202ENST00000369367 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
SCAF11-202ENST00000369367 TMPOP42166 694 aaKnown RBP11.78□□□□□ -0.52
SCAF11-202ENST00000369367 ADGRF5Q8IZF2 1346 aa11.77□□□□□ -0.52
SCAF11-202ENST00000369367 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.52
SCAF11-202ENST00000369367 SOGA3Q5TF21 947 aa11.77□□□□□ -0.52
SCAF11-202ENST00000369367 CDK5RAP3Q96JB5 506 aa11.77□□□□□ -0.52
SCAF11-202ENST00000369367 LRP2BPQ9P2M1 347 aa11.77□□□□□ -0.52
SCAF11-202ENST00000369367 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
SCAF11-202ENST00000369367 CTTNBP2Q8WZ74 1663 aa11.77□□□□□ -0.53
SCAF11-202ENST00000369367 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
SCAF11-202ENST00000369367 ATP2B2Q01814 1243 aa11.77□□□□□ -0.53
SCAF11-202ENST00000369367 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
SCAF11-202ENST00000369367 DBF4Q9UBU7 674 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-202ENST00000369367 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
SCAF11-202ENST00000369367 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 CDKL5O76039 1030 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
SCAF11-202ENST00000369367 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-202ENST00000369367 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms