RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 CBLBQ13191 982 aa11.94□□□□□ -0.5
PTPRC-202ENST00000367364 MYSM1Q5VVJ2 828 aa11.94□□□□□ -0.5
PTPRC-202ENST00000367364 Q6ZVU0 165 aa11.93□□□□□ -0.5
PTPRC-202ENST00000367364 CCDC155Q8N6L0 562 aa11.93□□□□□ -0.5
PTPRC-202ENST00000367364 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
PTPRC-202ENST00000367364 TUSC1Q2TAM9 212 aa11.92□□□□□ -0.5
PTPRC-202ENST00000367364 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
PTPRC-202ENST00000367364 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
PTPRC-202ENST00000367364 SPINT1O43278 529 aa11.91□□□□□ -0.5
PTPRC-202ENST00000367364 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
PTPRC-202ENST00000367364 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
PTPRC-202ENST00000367364 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
PTPRC-202ENST00000367364 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
PTPRC-202ENST00000367364 WHAMMQ8TF30 809 aa11.91□□□□□ -0.5
PTPRC-202ENST00000367364 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
PTPRC-202ENST00000367364 SLC35F4A4IF30 521 aa11.9□□□□□ -0.5
PTPRC-202ENST00000367364 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
PTPRC-202ENST00000367364 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
PTPRC-202ENST00000367364 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
PTPRC-202ENST00000367364 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
PTPRC-202ENST00000367364 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
PTPRC-202ENST00000367364 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
PTPRC-202ENST00000367364 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
PTPRC-202ENST00000367364 ITGA6P23229 1130 aa11.85□□□□□ -0.51
PTPRC-202ENST00000367364 VWA5B2Q8N398 1253 aa11.85□□□□□ -0.51
PTPRC-202ENST00000367364 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
PTPRC-202ENST00000367364 AK7Q96M32 723 aa11.83□□□□□ -0.52
PTPRC-202ENST00000367364 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
PTPRC-202ENST00000367364 IRS1P35568 1242 aa11.82□□□□□ -0.52
PTPRC-202ENST00000367364 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
PTPRC-202ENST00000367364 DNMT3AQ9Y6K1 912 aaPredicted RBP11.82□□□□□ -0.52
PTPRC-202ENST00000367364 CDC14CA4D256 554 aa11.81□□□□□ -0.52
PTPRC-202ENST00000367364 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
PTPRC-202ENST00000367364 GPAT2Q6NUI2 795 aa11.8□□□□□ -0.52
PTPRC-202ENST00000367364 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
PTPRC-202ENST00000367364 INSM2Q96T92 566 aaPredicted RBP11.8□□□□□ -0.52
PTPRC-202ENST00000367364 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
PTPRC-202ENST00000367364 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
PTPRC-202ENST00000367364 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
PTPRC-202ENST00000367364 RELBQ01201 579 aa11.78□□□□□ -0.52
PTPRC-202ENST00000367364 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
PTPRC-202ENST00000367364 RNF217Q8TC41 542 aa11.78□□□□□ -0.52
PTPRC-202ENST00000367364 SLC10A4Q96EP9 437 aa11.78□□□□□ -0.52
PTPRC-202ENST00000367364 PDE4DQ08499 809 aa11.77□□□□□ -0.53
PTPRC-202ENST00000367364 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
PTPRC-202ENST00000367364 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.53
PTPRC-202ENST00000367364 DHX9Q08211 1270 aaKnown RBP11.76□□□□□ -0.53
PTPRC-202ENST00000367364 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
PTPRC-202ENST00000367364 CDV3Q9UKY7 258 aaKnown RBP11.76□□□□□ -0.53
PTPRC-202ENST00000367364 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
PTPRC-202ENST00000367364 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
PTPRC-202ENST00000367364 ADAMTS2O95450 1211 aa11.74□□□□□ -0.53
PTPRC-202ENST00000367364 IGHA1P01876 353 aa11.74□□□□□ -0.53
PTPRC-202ENST00000367364 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
PTPRC-202ENST00000367364 ZNF395Q9H8N7 513 aaPredicted RBP11.74□□□□□ -0.53
PTPRC-202ENST00000367364 POLMQ9NP87 494 aaPredicted RBP11.74□□□□□ -0.53
PTPRC-202ENST00000367364 MARSP56192 900 aaKnown RBP11.73□□□□□ -0.53
PTPRC-202ENST00000367364 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
PTPRC-202ENST00000367364 GAS6Q14393 721 aa11.72□□□□□ -0.53
PTPRC-202ENST00000367364 TMPRSS4Q9NRS4 437 aa11.72□□□□□ -0.53
PTPRC-202ENST00000367364 CUEDC1Q9NWM3 386 aaPredicted RBP11.72□□□□□ -0.53
PTPRC-202ENST00000367364 FBXO31Q5XUX0 539 aaPredicted RBP11.71□□□□□ -0.53
PTPRC-202ENST00000367364 ZBTB33Q86T24 672 aa11.71□□□□□ -0.53
PTPRC-202ENST00000367364 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
PTPRC-202ENST00000367364 KDF1Q8NAX2 398 aaPredicted RBP11.7□□□□□ -0.54
PTPRC-202ENST00000367364 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
PTPRC-202ENST00000367364 FOXK2Q01167 660 aa11.69□□□□□ -0.54
PTPRC-202ENST00000367364 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
PTPRC-202ENST00000367364 NR6A1Q15406 480 aa11.69□□□□□ -0.54
PTPRC-202ENST00000367364 ZNF784Q8NCA9 323 aaPredicted RBP11.69□□□□□ -0.54
PTPRC-202ENST00000367364 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
PTPRC-202ENST00000367364 CELA2BP08218 269 aaPredicted RBP11.68□□□□□ -0.54
PTPRC-202ENST00000367364 LILRA1O75019 489 aa11.67□□□□□ -0.54
PTPRC-202ENST00000367364 ADH1AP07327 375 aa11.67□□□□□ -0.54
PTPRC-202ENST00000367364 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
PTPRC-202ENST00000367364 ADAM32Q8TC27 787 aa11.66□□□□□ -0.54
PTPRC-202ENST00000367364 RSPH6AQ9H0K4 717 aa11.65□□□□□ -0.54
PTPRC-202ENST00000367364 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
PTPRC-202ENST00000367364 PTK2Q05397 1052 aa11.64□□□□□ -0.55
PTPRC-202ENST00000367364 PTGIRP43119 386 aa11.63□□□□□ -0.55
PTPRC-202ENST00000367364 GPSM3Q9Y4H4 160 aa11.63□□□□□ -0.55
PTPRC-202ENST00000367364 ERVH48-1M5A8F1 160 aa11.62□□□□□ -0.55
PTPRC-202ENST00000367364 RAB15P59190 212 aa11.62□□□□□ -0.55
PTPRC-202ENST00000367364 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
PTPRC-202ENST00000367364 LYSMD3Q7Z3D4 306 aa11.62□□□□□ -0.55
PTPRC-202ENST00000367364 ITGB2P05107 769 aa11.61□□□□□ -0.55
PTPRC-202ENST00000367364 SLC24A3Q9HC58 644 aa11.61□□□□□ -0.55
PTPRC-202ENST00000367364 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
PTPRC-202ENST00000367364 ZNF837Q96EG3 531 aaPredicted RBP11.6□□□□□ -0.55
PTPRC-202ENST00000367364 PLA2G4EQ3MJ16 856 aa11.59□□□□□ -0.55
PTPRC-202ENST00000367364 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
PTPRC-202ENST00000367364 ESPNB1AK53 854 aa11.58□□□□□ -0.56
PTPRC-202ENST00000367364 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
PTPRC-202ENST00000367364 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
PTPRC-202ENST00000367364 RHOQP17081 205 aa11.57□□□□□ -0.56
PTPRC-202ENST00000367364 PRICKLE2Q7Z3G6 844 aa11.57□□□□□ -0.56
PTPRC-202ENST00000367364 GPR25O00155 361 aa11.56□□□□□ -0.56
PTPRC-202ENST00000367364 RNF144AP50876 292 aaPredicted RBP11.56□□□□□ -0.56
PTPRC-202ENST00000367364 XP32Q5T750 250 aa11.56□□□□□ -0.56
PTPRC-202ENST00000367364 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms