RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SOCS7O14512 581 aa13.48□□□□□ -0.25
H3F3A-201ENST00000366813 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
H3F3A-201ENST00000366813 SENP2Q9HC62 589 aa13.48□□□□□ -0.25
H3F3A-201ENST00000366813 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
H3F3A-201ENST00000366813 AGERQ15109 404 aa13.47□□□□□ -0.25
H3F3A-201ENST00000366813 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
H3F3A-201ENST00000366813 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
H3F3A-201ENST00000366813 DIP2BQ9P265 1576 aa13.45□□□□□ -0.26
H3F3A-201ENST00000366813 F12P00748 615 aaPredicted RBP13.45□□□□□ -0.26
H3F3A-201ENST00000366813 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
H3F3A-201ENST00000366813 CAPN5O15484 640 aaPredicted RBP13.44□□□□□ -0.26
H3F3A-201ENST00000366813 FAM174AQ8TBP5 190 aa13.44□□□□□ -0.26
H3F3A-201ENST00000366813 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
H3F3A-201ENST00000366813 TSPOAP1O95153 1857 aa13.43□□□□□ -0.26
H3F3A-201ENST00000366813 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
H3F3A-201ENST00000366813 ARMC2Q8NEN0 867 aa13.42□□□□□ -0.26
H3F3A-201ENST00000366813 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
H3F3A-201ENST00000366813 ARID5BQ14865 1188 aa13.41□□□□□ -0.26
H3F3A-201ENST00000366813 FOXJ1Q92949 421 aa13.41□□□□□ -0.26
H3F3A-201ENST00000366813 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
H3F3A-201ENST00000366813 KDM4CQ9H3R0 1056 aa13.41□□□□□ -0.26
H3F3A-201ENST00000366813 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
H3F3A-201ENST00000366813 MPNDQ8N594 471 aa13.4□□□□□ -0.26
H3F3A-201ENST00000366813 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
H3F3A-201ENST00000366813 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
H3F3A-201ENST00000366813 MAPKBP1O60336 1514 aa13.4□□□□□ -0.26
H3F3A-201ENST00000366813 NUP160Q12769 1436 aa13.4□□□□□ -0.26
H3F3A-201ENST00000366813 SNRPBP14678 240 aaKnown RBP13.39□□□□□ -0.27
H3F3A-201ENST00000366813 TREML4Q6UXN2 200 aa13.39□□□□□ -0.27
H3F3A-201ENST00000366813 BPHLQ86WA6 291 aaPredicted RBP13.39□□□□□ -0.27
H3F3A-201ENST00000366813 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
H3F3A-201ENST00000366813 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
H3F3A-201ENST00000366813 NNTQ13423 1086 aa13.39□□□□□ -0.27
H3F3A-201ENST00000366813 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
H3F3A-201ENST00000366813 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
H3F3A-201ENST00000366813 FAM117AQ9C073 453 aa13.36□□□□□ -0.27
H3F3A-201ENST00000366813 CUX1P39880 1505 aa13.36□□□□□ -0.27
H3F3A-201ENST00000366813 DISP3Q9P2K9 1392 aa13.34□□□□□ -0.27
H3F3A-201ENST00000366813 WFS1O76024 890 aa13.34□□□□□ -0.27
H3F3A-201ENST00000366813 BMP1P13497 986 aa13.34□□□□□ -0.27
H3F3A-201ENST00000366813 CTDSPL2Q05D32 466 aa13.34□□□□□ -0.27
H3F3A-201ENST00000366813 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
H3F3A-201ENST00000366813 ADH1CP00326 375 aa13.33□□□□□ -0.28
H3F3A-201ENST00000366813 WDR4P57081 412 aaKnown RBP13.33□□□□□ -0.28
H3F3A-201ENST00000366813 SH3D19Q5HYK7 790 aa13.33□□□□□ -0.28
H3F3A-201ENST00000366813 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
H3F3A-201ENST00000366813 CDK15Q96Q40 435 aa13.33□□□□□ -0.28
H3F3A-201ENST00000366813 C4orf48Q5BLP8 95 aa13.31□□□□□ -0.28
H3F3A-201ENST00000366813 TRIM46Q7Z4K8 759 aa13.3□□□□□ -0.28
H3F3A-201ENST00000366813 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
H3F3A-201ENST00000366813 ADCY10Q96PN6 1610 aa13.3□□□□□ -0.28
H3F3A-201ENST00000366813 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
H3F3A-201ENST00000366813 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
H3F3A-201ENST00000366813 NR5A1Q13285 461 aa13.29□□□□□ -0.28
H3F3A-201ENST00000366813 TMEM132AQ24JP5 1023 aa13.29□□□□□ -0.28
H3F3A-201ENST00000366813 SCARF1Q14162 830 aa13.28□□□□□ -0.28
H3F3A-201ENST00000366813 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
H3F3A-201ENST00000366813 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
H3F3A-201ENST00000366813 TIMP2P16035 220 aa13.26□□□□□ -0.29
H3F3A-201ENST00000366813 GPKOWQ92917 476 aaPredicted RBP eCLIP13.26□□□□□ -0.292e-8■■□□□ 11.7
H3F3A-201ENST00000366813 ZFP42Q96MM3 310 aa13.26□□□□□ -0.29
H3F3A-201ENST00000366813 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
H3F3A-201ENST00000366813 AP1G2O75843 785 aa13.25□□□□□ -0.29
H3F3A-201ENST00000366813 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
H3F3A-201ENST00000366813 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
H3F3A-201ENST00000366813 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
H3F3A-201ENST00000366813 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
H3F3A-201ENST00000366813 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
H3F3A-201ENST00000366813 GRM5P41594 1212 aa13.24□□□□□ -0.29
H3F3A-201ENST00000366813 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
H3F3A-201ENST00000366813 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
H3F3A-201ENST00000366813 SH3BP5LQ7L8J4 393 aa13.24□□□□□ -0.29
H3F3A-201ENST00000366813 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
H3F3A-201ENST00000366813 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
H3F3A-201ENST00000366813 LCE2AQ5TA79 106 aaPredicted RBP13.23□□□□□ -0.29
H3F3A-201ENST00000366813 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
H3F3A-201ENST00000366813 KLF16Q9BXK1 252 aaPredicted RBP13.22□□□□□ -0.29
H3F3A-201ENST00000366813 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.29
H3F3A-201ENST00000366813 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
H3F3A-201ENST00000366813 ITPKCQ96DU7 683 aa13.21□□□□□ -0.29
H3F3A-201ENST00000366813 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.29
H3F3A-201ENST00000366813 C1QTNF2Q9BXJ5 285 aa13.21□□□□□ -0.29
H3F3A-201ENST00000366813 FKBPLQ9UIM3 349 aa13.21□□□□□ -0.29
H3F3A-201ENST00000366813 NR3C2P08235 984 aa13.2□□□□□ -0.3
H3F3A-201ENST00000366813 NR6A1Q15406 480 aa13.2□□□□□ -0.3
H3F3A-201ENST00000366813 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
H3F3A-201ENST00000366813 PDXDC2PQ6P474 469 aa13.2□□□□□ -0.3
H3F3A-201ENST00000366813 ARHGAP9Q9BRR9 750 aa13.2□□□□□ -0.3
H3F3A-201ENST00000366813 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
H3F3A-201ENST00000366813 UPP2O95045 317 aa13.18□□□□□ -0.3
H3F3A-201ENST00000366813 FSHRP23945 695 aa13.18□□□□□ -0.3
H3F3A-201ENST00000366813 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
H3F3A-201ENST00000366813 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
H3F3A-201ENST00000366813 MAP4K5Q9Y4K4 846 aa13.18□□□□□ -0.3
H3F3A-201ENST00000366813 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
H3F3A-201ENST00000366813 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
H3F3A-201ENST00000366813 PNMA1Q8ND90 353 aa13.16□□□□□ -0.3
H3F3A-201ENST00000366813 PCMTD1Q96MG8 357 aaPredicted RBP13.16□□□□□ -0.3
H3F3A-201ENST00000366813 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
H3F3A-201ENST00000366813 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms