RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 FKBPLQ9UIM3 349 aa11.63□□□□□ -0.55
RNU4-40P-201ENST00000364351 NR6A1Q15406 480 aa11.62□□□□□ -0.55
RNU4-40P-201ENST00000364351 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
RNU4-40P-201ENST00000364351 LORP23490 312 aaPredicted RBP11.61□□□□□ -0.55
RNU4-40P-201ENST00000364351 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
RNU4-40P-201ENST00000364351 PPP1R26Q5T8A7 1209 aaPredicted RBP11.6□□□□□ -0.55
RNU4-40P-201ENST00000364351 ZBTB33Q86T24 672 aa11.6□□□□□ -0.55
RNU4-40P-201ENST00000364351 DDRGK1Q96HY6 314 aa11.6□□□□□ -0.55
RNU4-40P-201ENST00000364351 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
RNU4-40P-201ENST00000364351 AP1G2O75843 785 aa11.59□□□□□ -0.55
RNU4-40P-201ENST00000364351 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
RNU4-40P-201ENST00000364351 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNU4-40P-201ENST00000364351 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
RNU4-40P-201ENST00000364351 PPFIA3O75145 1194 aa11.58□□□□□ -0.56
RNU4-40P-201ENST00000364351 CBLBQ13191 982 aa11.58□□□□□ -0.56
RNU4-40P-201ENST00000364351 KCTD15Q96SI1 283 aaPredicted RBP11.58□□□□□ -0.56
RNU4-40P-201ENST00000364351 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
RNU4-40P-201ENST00000364351 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
RNU4-40P-201ENST00000364351 VSIG8P0DPA2 414 aa11.56□□□□□ -0.56
RNU4-40P-201ENST00000364351 PTK2Q05397 1052 aa11.55□□□□□ -0.56
RNU4-40P-201ENST00000364351 CDV3Q9UKY7 258 aaKnown RBP11.55□□□□□ -0.56
RNU4-40P-201ENST00000364351 ZC3H4Q9UPT8 1303 aaKnown RBP11.55□□□□□ -0.56
RNU4-40P-201ENST00000364351 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
RNU4-40P-201ENST00000364351 TTLL8A6PVC2 850 aa11.54□□□□□ -0.56
RNU4-40P-201ENST00000364351 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.56
RNU4-40P-201ENST00000364351 Q6ZVU0 165 aa11.53□□□□□ -0.56
RNU4-40P-201ENST00000364351 EPS8L1Q8TE68 723 aa11.53□□□□□ -0.56
RNU4-40P-201ENST00000364351 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
RNU4-40P-201ENST00000364351 ADAM32Q8TC27 787 aa11.52□□□□□ -0.57
RNU4-40P-201ENST00000364351 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
RNU4-40P-201ENST00000364351 INTS6LQ5JSJ4 861 aaKnown RBP11.51□□□□□ -0.57
RNU4-40P-201ENST00000364351 BCANQ96GW7 911 aa11.51□□□□□ -0.57
RNU4-40P-201ENST00000364351 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
RNU4-40P-201ENST00000364351 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
RNU4-40P-201ENST00000364351 SPINT1O43278 529 aa11.49□□□□□ -0.57
RNU4-40P-201ENST00000364351 PTSQ03393 145 aa11.49□□□□□ -0.57
RNU4-40P-201ENST00000364351 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
RNU4-40P-201ENST00000364351 USP17L8P0C7I0 530 aa11.48□□□□□ -0.57
RNU4-40P-201ENST00000364351 RAB15P59190 212 aa11.48□□□□□ -0.57
RNU4-40P-201ENST00000364351 RELBQ01201 579 aa11.48□□□□□ -0.57
RNU4-40P-201ENST00000364351 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
RNU4-40P-201ENST00000364351 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
RNU4-40P-201ENST00000364351 RFC5P40937 340 aa11.45□□□□□ -0.58
RNU4-40P-201ENST00000364351 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
RNU4-40P-201ENST00000364351 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
RNU4-40P-201ENST00000364351 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
RNU4-40P-201ENST00000364351 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
RNU4-40P-201ENST00000364351 INSM2Q96T92 566 aaPredicted RBP11.44□□□□□ -0.58
RNU4-40P-201ENST00000364351 ZNF395Q9H8N7 513 aaPredicted RBP11.44□□□□□ -0.58
RNU4-40P-201ENST00000364351 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
RNU4-40P-201ENST00000364351 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
RNU4-40P-201ENST00000364351 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
RNU4-40P-201ENST00000364351 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
RNU4-40P-201ENST00000364351 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
RNU4-40P-201ENST00000364351 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
RNU4-40P-201ENST00000364351 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
RNU4-40P-201ENST00000364351 SLC35F4A4IF30 521 aa11.39□□□□□ -0.59
RNU4-40P-201ENST00000364351 KRT76Q01546 638 aa11.39□□□□□ -0.59
RNU4-40P-201ENST00000364351 ADD1P35611 737 aaKnown RBP11.38□□□□□ -0.59
RNU4-40P-201ENST00000364351 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
RNU4-40P-201ENST00000364351 ADH1AP07327 375 aa11.37□□□□□ -0.59
RNU4-40P-201ENST00000364351 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
RNU4-40P-201ENST00000364351 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
RNU4-40P-201ENST00000364351 CDC14CA4D256 554 aa11.36□□□□□ -0.59
RNU4-40P-201ENST00000364351 LILRA1O75019 489 aa11.36□□□□□ -0.59
RNU4-40P-201ENST00000364351 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
RNU4-40P-201ENST00000364351 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
RNU4-40P-201ENST00000364351 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
RNU4-40P-201ENST00000364351 ESPNB1AK53 854 aa11.35□□□□□ -0.59
RNU4-40P-201ENST00000364351 ITGA6P23229 1130 aa11.35□□□□□ -0.59
RNU4-40P-201ENST00000364351 PTGIRP43119 386 aa11.35□□□□□ -0.59
RNU4-40P-201ENST00000364351 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
RNU4-40P-201ENST00000364351 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
RNU4-40P-201ENST00000364351 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
RNU4-40P-201ENST00000364351 CYLDQ9NQC7 956 aa11.34□□□□□ -0.59
RNU4-40P-201ENST00000364351 SV2AQ7L0J3 742 aa11.33□□□□□ -0.6
RNU4-40P-201ENST00000364351 RNFT1Q5M7Z0 435 aa11.32□□□□□ -0.6
RNU4-40P-201ENST00000364351 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
RNU4-40P-201ENST00000364351 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
RNU4-40P-201ENST00000364351 PCDHB9Q9Y5E1 797 aa11.32□□□□□ -0.6
RNU4-40P-201ENST00000364351 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
RNU4-40P-201ENST00000364351 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
RNU4-40P-201ENST00000364351 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
RNU4-40P-201ENST00000364351 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
RNU4-40P-201ENST00000364351 LYSMD3Q7Z3D4 306 aa11.29□□□□□ -0.6
RNU4-40P-201ENST00000364351 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
RNU4-40P-201ENST00000364351 PRICKLE2Q7Z3G6 844 aa11.28□□□□□ -0.6
RNU4-40P-201ENST00000364351 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
RNU4-40P-201ENST00000364351 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
RNU4-40P-201ENST00000364351 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
RNU4-40P-201ENST00000364351 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
RNU4-40P-201ENST00000364351 ZNF385CQ66K41 422 aaPredicted RBP11.26□□□□□ -0.61
RNU4-40P-201ENST00000364351 SVOPQ8N4V2 548 aa11.26□□□□□ -0.61
RNU4-40P-201ENST00000364351 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
RNU4-40P-201ENST00000364351 RHOQP17081 205 aa11.25□□□□□ -0.61
RNU4-40P-201ENST00000364351 RNF144AP50876 292 aaPredicted RBP11.24□□□□□ -0.61
RNU4-40P-201ENST00000364351 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
RNU4-40P-201ENST00000364351 MEN1O00255 615 aa11.23□□□□□ -0.61
RNU4-40P-201ENST00000364351 CUEDC1Q9NWM3 386 aaPredicted RBP11.23□□□□□ -0.61
RNU4-40P-201ENST00000364351 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms