RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 SKIV2LQ15477 1246 aaKnown RBP4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SH3BP5LQ7L8J4 393 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 MEIOBQ8N635 442 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 ZNF592Q92610 1267 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 POLR3EQ9NVU0 708 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 FKBPLQ9UIM3 349 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 PPFIA3O75145 1194 aa4.62□□□□□ -1.67
RNU6-1048P-201ENST00000364054 NBPF20Q3BBV1 942 aa4.62□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SH3D19Q5HYK7 790 aa4.62□□□□□ -1.67
RNU6-1048P-201ENST00000364054 FIGNL2A6NMB9 653 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 TTLL8A6PVC2 850 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 ERFEQ4G0M1 354 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 C4orf48Q5BLP8 95 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 RTL5Q5HYW3 569 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 CCDC125Q86Z20 511 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 DNMT3LQ9UJW3 386 aa4.61□□□□□ -1.67
RNU6-1048P-201ENST00000364054 BCANQ96GW7 911 aa4.6□□□□□ -1.67
RNU6-1048P-201ENST00000364054 KCTD15Q96SI1 283 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SOS2Q07890 1332 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1048P-201ENST00000364054 CDC14CA4D256 554 aa4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 RNF225M0QZC1 329 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 CTDSPL2Q05D32 466 aa4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 PPP1R26Q5T8A7 1209 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 PPP2R2DQ66LE6 453 aa4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SVOPQ8N4V2 548 aa4.59□□□□□ -1.67
RNU6-1048P-201ENST00000364054 RAB15P59190 212 aa4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 PTSQ03393 145 aa4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 Q6ZVU0 165 aa4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 CNTNAP3BQ96NU0 1288 aa4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 CNTNAP3Q9BZ76 1288 aa4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 POLMQ9NP87 494 aaPredicted RBP4.58□□□□□ -1.68
RNU6-1048P-201ENST00000364054 SPINT1O43278 529 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 AP1G2O75843 785 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 RELBQ01201 579 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 CBLBQ13191 982 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 DZIP3Q86Y13 1208 aaKnown RBP4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 SEPT12Q8IYM1 358 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 TMEM151AQ8N4L1 468 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 KCTD17Q8N5Z5 321 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 COL25A1Q9BXS0 654 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 KDM4CQ9H3R0 1056 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 GOPCQ9HD26 462 aa4.57□□□□□ -1.68
RNU6-1048P-201ENST00000364054 APBB1O00213 710 aa4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 MCCD1P59942 119 aaPredicted RBP4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 TMEM259Q4ZIN3 620 aa4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 CCDC155Q8N6L0 562 aa4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 PCMTD1Q96MG8 357 aaPredicted RBP4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 AGBL1Q96MI9 1066 aa4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ZNF330Q9Y3S2 320 aaPredicted RBP4.56□□□□□ -1.68
RNU6-1048P-201ENST00000364054 GDF11O95390 407 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 MARSP56192 900 aaKnown RBP4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 KCNMA1Q12791 1236 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 NR6A1Q15406 480 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 RNF20Q5VTR2 975 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 SV2AQ7L0J3 742 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 VWA5B2Q8N398 1253 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ADAM32Q8TC27 787 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 LRRN4Q8WUT4 740 aa4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 NANOS1Q8WY41 292 aaKnown RBP4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 INSM2Q96T92 566 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ESF1Q9H501 851 aaKnown RBP4.55□□□□□ -1.68
RNU6-1048P-201ENST00000364054 MAP3K10Q02779 954 aa4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 RASSF7Q02833 373 aa4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 INTS6LQ5JSJ4 861 aaKnown RBP4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 FOXR1Q6PIV2 292 aa4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 GMCL1Q96IK5 515 aa4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ADAMTS8Q9UP79 889 aa4.54□□□□□ -1.68
RNU6-1048P-201ENST00000364054 USP17L8P0C7I0 530 aa4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ITGA6P23229 1130 aa4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 CTSOP43234 321 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 KRT76Q01546 638 aa4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 GPR161Q8N6U8 529 aaKnown RBP4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 FAM117AQ9C073 453 aa4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ZNF395Q9H8N7 513 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1048P-201ENST00000364054 ADH1AP07327 375 aa4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 IRS1P35568 1242 aa4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RFC5P40937 340 aa4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SUZ12Q15022 739 aaKnown RBP4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PROCA1Q8NCQ7 364 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ENAMQ9NRM1 1142 aa4.52□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SLC35F4A4IF30 521 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ZBBXA8MT70 800 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PTGIRP43119 386 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RNFT1Q5M7Z0 435 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 GPAT2Q6NUI2 795 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 LYSMD3Q7Z3D4 306 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 GPBP1L1Q9HC44 474 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PRM3Q9NNZ6 103 aa4.51□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ESPNB1AK53 854 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 H7C1W4 665 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ERVH48-1M5A8F1 160 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SOCS7O14512 581 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 GPC1P35052 558 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ZNF385CQ66K41 422 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ZNF784Q8NCA9 323 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RNF217Q8TC41 542 aa4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SCARF2Q96GP6 870 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1048P-201ENST00000364054 TMPRSS4Q9NRS4 437 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms